Lateral migration of fishes in Amazon floodplains

Abstract— Migrations of fish in the outlet channel of Lago do Rei, a floodplain lake on Careiro Island in the Amazon River, were examined using three capture methods. Of the 85 species found in the Parana do Rei (channel), 20 migrated between the lake and river. Migrations from the lake to the river occurred in two pulses. In August-September, as the river water level began to recede, some fish migrated to the river with the current. As the river water level rose in December-January, additional fish migrated towards the main river against the current. Fish returned to the lake by March or April after they had spawned. The migratory patterns of six species, family Curimatidae and Prochilodontidae: Potamorhina latior, Psectrogaster amazonica , P. rutiloides, Curimata kneri, Prochilodus nigricans and Semaprochilodus taeniurus are described in detail. Lateral migrations of fish in this ecosystem appear to be closely linked to breeding and to physical habitat changes related to river water level.     

The effect of sex and genotype on growth performance,feed efficiency,and carcass traits of local sheep group Pantaneiro and Texel or Santa Inês crossbred finished on feedlot

This study aimed to assess and compare the growth performance, feed efficiency, and carcass traits of Pantaneiro sheep and their Texel and Santa Inês crossbreds. Ninety-six lambs, fifty-one males, and forty-five females, with a mean weaning weight of 15.21?±?1.25 kg and 78?±?13 days of age, were slaughtered at a 32-kg body weight. The results showed better production efficiency from males compared with females. Texel-crossed lambs had a better growth performance than the other genotypes. The Texel?×?Pantaneiro lambs were more efficient with a better feedlot performance, higher ribeye muscle area, and better carcass characteristics with an adequate amount of fat cover. Pantaneiro lambs and their crosses with meat breeds could be useful in meat production systems under Savanna environmental conditions.     

Cervical extradural haematoma in an ataxic horse

As neurological diseases in horses share many overlapping clinical signs, the veterinarian is required to know how to perform a focused evaluation of this system as well as how to carry out complementary examinations to establish an aetiological diagnosis. This is a case report of an ataxic horse presenting with an extradural haematoma in the region of the 7th cervical vertebra. The 7‐year‐old Criollo mare presented with clinical signs of ataxia grade 3 (scale 1–5) in all limbs and a proprioceptive deficit. Radiological evaluation did not show bone changes or narrowing of the cervical canal. Samples of blood, serum and cerebrospinal fluid were collected and tested negative for antibodies to equine herpes virus type 1–4, Trypanosoma evansi and Sarcocystis neurona. The disease evolution was followed over a 4‐week period, after which the animal showed worsening overall clinical signs, and thus euthanasia was performed. A necropsy did not reveal macroscopic changes in any organs, except for an extradural haematoma in the region of the 7th cervical vertebra causing spinal cord compression. Histological examinations showed that the nodular lesion consisted of fibrovascular tissue, granulation tissue at different stages of maturation, red blood cells, cellular debris, fibrin and macrophages. The white matter of the ventral horn of the spinal cord contained degenerative lesions. In addition, the brain tested negative for rabies virus encephalitis. Based on the history, the laboratory test results, anamnesis and the lesion observed at necropsy, it was concluded that the ataxia was due to spinal cord compression, which was caused by an extradural haematoma in the region of the 7th cervical vertebra. Evaluation of the equine neurological system is highly important in localising the area of lesions, and complementary examinations are useful in differentiating between diseases affecting this system. Spinal cord compression injuries, such as extradural haematomas, are rarely reported in the literature, and their pathophysiology is difficult to understand. Nevertheless, they should be included in the differential diagnosis of ataxia in horses.     

Dual disease resistance in a selectively bred eastern oyster, Crassostrea virginica, strain tested in Chesapeake Bay

Selective breeding efforts have yielded oyster strains, Crassostrea virginica, with improved survival and resistance against Haplosporidium nelsoni (MSX); however, because of susceptibility to the oyster pathogen Perkinsus marinus (Dermo), their utility has been limited in areas where the two parasites co-occur. Dual resistance to H. nelsoni and P. marinus was achieved through four generations of artificial selection of wild Delaware Bay oyster progeny at a site in the lower York River, Virginia, USA where both diseases are enzootic. During 1993–1995, survival, growth, and disease susceptibility of third generation Delaware Bay (F₃-DEBY) oysters were evaluated at the York River site in comparison to that of similarly selected third generation James River, Virginia oysters (F₃-JR), and first generation Louisiana oysters (F₁-LA), whose parents were naturally selected in the wild for resistance to P. marinus. During 1997–1999, the performance of F₄-DEBY was evaluated at three sites in Virginia in comparison to two groups of first generation oysters whose parents originated from Mobjack Bay and Tangier Sound, Virginia where both P. marinus and H. nelsoni are enzootic. In the presence of high infection pressure from both H. nelsoni and P. marinus, the F₃-DEBY stock showed significantly higher survival and growth than either the F₃-JR or F₁-LA strain. After 15 months of deployment, 79% of F₃-DEBY, 11% of F₃-JR and 17% of F₁-LA oysters were market size (≥76.2 mm) and cumulative mortality was only 16% in F₃-DEBY as compared to 42% in F₃-JR and F₁-LA. At the termination of the study, F₃-DEBY oysters exhibited 22% lower mortality than the F₁-LA stock, which outperformed the F₃-JR stock. Relative performance in respect to disease varied considerably with sample date; however, average H. nelsoni weighted prevalence varied such that F₃-DEBY1-LA=F₃-JR and average P. marinus weighted prevalence varied such that F₁-LA3-DEBY3-JR. In the 1997–1999 trial, F₄-DEBY oysters experienced 34–61% lower mortality, greater growth rate, and consistently lower prevalence and intensity of P. marinus than either Mobjack Bay or Tangier Sound oysters. H. nelsoni prevalences were very low (<12%) in all three stocks. This is the first study to demonstrate that reduced susceptibility to both P. marinus and H. nelsoni can be achieved through selective breeding.     

Global phylogeography of the smooth hammerhead shark: Glacial refugia and historical migration patterns

1. Extreme climate changes during the Cenozoic Era strengthened different biogeographical barriers that decreased the connectivity among populations, triggering lineage diversification of different species worldwide.
2. The mitochondrial DNA control region was employed to explore the phylogeography of Sphyrna zygaena, a globally distributed species threatened by unsustainable, illegal, unreported and unregulated fisheries triggered by the international shark fin trade. It is listed as ‘Vulnerable’ by the IUCN Red List and its trade is regulated by CITES Appendix II.
3. Only 13 haplotypes were found with low genetic diversity levels (hd = 0.686 ± 0.014; π = 0.00206 ± 0.00004) compared with other species of the Sphyrnidae family. The species has a very strong phylogeographic population structure among the Atlantic, Indian and Pacific Oceans (Φ_ST = 0.79132). Worldwide, there are six distinct populations with some haplotype sharing.
4. These populations are probably connected by a stepping-stone dispersal of a small number of migrants per generation from the Indo-Pacific towards the Atlantic. Modelling suggests that S. zygaena diverged into two lineages around 6.96 million years ago which have been isolated in glacial refuges in the Atlantic and Indo-Pacific oceans; and after deglaciation, a population expansion probably permitted secondary contact.
5. Conservation plans to establish differentiated management units should be adopted in each of the identified populations. Among these, the Eastern Central Atlantic and West Indo-Pacific are the most important areas for the species considering the historical migration routes that act as a bridge connecting the Atlantic and Indo-Pacific Oceans while the Gulf of Guinea connects the Atlantic populations. Still, further studies are required to know if these populations are also linked with nursery areas for the species.
6. The results herein can help to delimit the main evolutionarily significant units to implement effective policies to establish differentiated management units as starting points to genetic monitoring programmes for Sphyrna zygaena.

     

Genetic diversity among wild sugarcane germplasm from Laos revealed with markers

A group of 35 wild Saccharum complex clones, collected in Laos(ECL), was studied for its nuclear genetic diversity by RFLP revealed by 10dispersed low copy probes. Representatives of the main germplasmdiversity, regularly used in introgression, were also included. A preliminarycharacterisation of the new clones was performed by Erianthus specificprimers. A set of the 11 ECL clones most outstanding for their diseaseresistance and vigor and basic germplasm members were also characterisedby 9 cytoplasmic probes. Nuclear diversity evidenced that ECL clonesrepresented an independent genetic pool consisting at least of 3 differentgroups. A group of bands was exclusively exhibited by ECL clones. Theoccurrence of genetic recombination among them was suggested by thepresence of the new bands in 2 or 3 clonal groups. Erianthus specificamplification was positive for 7 ECL clones from different nuclear groups.Dendrogram analysis based on cytoplasmic diversity divided genotypes into2 major cytoplasmic types comprising 5 groups. The ECL clones separatedin 2 distinct groups: one located in the same cytoplasmic type as Erianthus clones; the other one, in an intermediate position, closer to Saccharum species. Basic clones groups were consistent with theirtaxonomic classification. The diversity revealed by nuclear singlecopy/nuclear repetitive/cytoplasmic patterns of the ECL germplasmcontrasts with what is usually observed and points to an active populationevolution. Further studies needed to confirmed this hypothesis arediscussed.     

Heritabilities and Minimum Gene Number Estimates of Carrot Carotenoids

Summary Broad sense heritabilities and gene numbers were estimated for the production of total carotenoids and the major component carotenoids of carrot storage roots: phytoene, ζ-carotene, β-carotene, α-carotene, and lycopene. Two crosses with different backgrounds were evaluated: orange B493 × white QAL and orange Brasilia × dark orange HCM. The HCM (high carotene mass selection), Brasilia and B493 parents had both α-carotene and β-carotene, but HCM had proportionally more α-carotene. Carotene content in F ₂ populations ranged from 522 ppm to 1714 ppm in Brasilia × HCM and from 0 to 695 ppm in B493 × QAL progeny. F ₂ plants segregating for absence of α-carotene were identified in B493 × QAL. Broad-sense heritabilities ranged from 28% to 48% for all carotenes except lycopene and phytoene where estimates were 44% to 89% in the Brasilia × HCM cross, All heritability values exceeded 88% for the B493 × QAL cross, except one estimate for lycopene. The estimated number of genes was 4 conditioning α-carotene, 2 to 3 each for β-carotene and total carotenes and one each for ζ-carotene, lycopene and phytoene in the orange × dark orange cross. In the orange × white cross, the estimates were 4 genes for α-carotene, 1 to 2 each for lycopene and total carotenes and 1 for each of the other carotenes. These results are in general agreement with QTL studies and they provided evidence for continuous inheritance of α-carotene, β-carotene and total carotenoids in the orange × dark orange cross and discrete inheritance for β-carotene and total carotenoids in the orange × white cross.Part of thesis “Biometrical studies and quantitative trait loci associated with major products of the carotenoids pathway of carrot (Daucus carota L.)” presented by the first author as partial fulfillment of the requirement of the PhD degree in Plant Breeding and Plant Genetics, UW-Madison, USA, 2001.     

Changes in Organic Matter of a Ferrallitic Tropical Soil Degraded by Cropping Systems: The Case of Southern Senegal

Understanding of the mechanisms involved in the restoration of degraded soils is necessary in order to assess the sustainability of a cropping system. For this purpose, an 8-year experiment was set up to test the efficiency of four cropping systems involving applications of fertilizer and/or manure and incorporation of crop residues and/or fallows on the regeneration of a Haplic Acrisol degraded by about 90 years of traditional cropping (groundnut-millet rotation without any input). The supply of nitrogen by the soil and particle size and chemical distribution were measured and used to characterize the soil organic matter (SOM) after 2 and 8 years of treatments, and then related to nutrients uptake. Two of the four cropping systems tested that were expected to regenerate soil fertility (Q1 and Q2: 4-year rotations including a plowed-in fallow, incorporation of crop residues, and mineral fertilization) both had a depressive effect on SOM content, although the losses of total C and N observed during the experiment (e.g .,-23% N and -20% N for Q1 and Q2, respectively) were less than that for the control (traditional cropping B, -33% N). Only the multiyear fallow did not result in further degradation of SOM, without, however, enriching the soil. On the other hand, an annual application of 10 Mg dry matter of manure ha -1 , combined with fertilizer, markedly increased the SOM (total N increased by factor 2 after only 2 years), an effect that seemed, however, stabilized at the end of the 8 years. Only a strong (10 Mg dry matter ha -1 ) and annual supply of manure, associated with mineral fertilization, had a positive effect on SOM, but its durability is not established.     

Synthesis and structural characterization of oaklin-catechins

Condensation reactions of procyanidin dimer B4 with two representative oak wood cinnamic aldehydes (coniferaldehyde and sinapaldehyde) were conducted in winelike model solutions. Coniferaldehyde led to the formation of guaiacylcatechin-pyrylium-catechin (GCP-catechin, 737 m/z), whereas sinapaldehyde led to the formation of syringylcatechin-pyrylium-catechin (SCP-catechin, 767 m/z). The former was also structurally characterized by 1D and 2D NMR, allowing an elucidation of the formation mechanism of these oaklin-catechin adducts and demonstrating the importance of procyanidins in the formation of colored compounds through the reaction with cinnamic aldehydes extracted from oaks during storage.