Transformation of Petroleum Saturated Hydrocarbons during Soil Bioremediation Experiments

This paper presents transformations of saturated hydrocarbons of petroleum type pollutants during ex situ bioremediation of soil on the pilot heap (halde), during a period of 6 months, within the grounds of Petroleum Refinery Pan?evo (Serbia). Samples for analysis were taken in time intervals of 2 weeks (P₁–P₁₂ samples). Organic substance was extracted by Soxhlet’s method and quantified. Isoprenoid aliphatics, in particular pristane and phytane, and polycyclic aliphatics of sterane and triterpane types in saturated hydrocarbon fractions were analysed by GC-MS (SIM method). Significant amounts of n-alkanes have not been detected. The MS-chromatogram revealed only marginal amounts of pristane and phytane in sample P₁. Pristane and phytane occurred in sample P₈, and in even higher quantities in the final sample P_12. The proceeding bioremediation process was accompanied by the decrease of the relative amounts of pentacyclic terpanes of hopane type, compared to tri- and tetracyclic terpanes. In the initial sample P₁ the distribution of steranes and hopanes follows a pattern, which is characteristic for crude oils. However, their identification by SIM method was not possible in samples P₈ and P₁₂ because of the reduced concentration. The observed changes in the alkane fractions’ compositions may be considered as atypical, referring to the fact that during oil biodegradation under natural conditions, decomposition of isoprenoids occurs much easier and faster than decomposition of polycyclic alkanes of tri-, tetra- and pentacyclic terpane, sterane and diasterane types, after the decomposition of n-alkanes has been almost completed.     

Sequence analysis of both genome segments of three Croatian infectious bursal disease field viruses

In order to determine the mutations responsible for virulence, three Croatian field infectious bursal disease viruses (IBDV), designated Cro-Ig/02, Cro-Po/00, and Cro-Pa/98 were characterized. Coding regions of both genomic segments were sequenced, and the nucleotide and deduced amino acid sequences were compared with previously reported full-length sequenced IBDV strains. Phylogenetic analysis, based on the nucleotide and deduced amino acid sequences of polyprotein and VP1, was performed. Eight characteristic amino acid residues, that were common to very virulent (vv) IBDV, were detected on polyprotein: 222A, 256I, 294I, 451L, 685N, 715S, 751D, and 1005A. All eight were found in Cro-Ig/02 and Cro-Po/00. C-Pa/98 had all the characteristics of an attenuated strain, except for glutamine on residue 253, which is common for vv, classical virulent, and variant strains. Between less virulent and vvIBDV, three substitutions were found on VP5: 49 G --> R, 79 --> F, and 137 R --> W. In VP1, there were nine characteristic amino acid residues common to vvwIBDV: 146D, 147N, 242E, 390M, 393D, 511S, 562P, 687P, and 695R. All nine residues were found in A-Ig/02, and eight were found in B-Po/00, which had isoleucine on residue 390. Based on our analyses, isolates Cro-Ig/02 and Cro-Po/00 were classified with vv IBDV strains. C-Pa/98 shared all characteristic amino acid residues with attenuated and classical virulence strains, so it was classified with those.     

Risk factors for tibial tuberosity fracture after tibial plateau leveling osteotomy in dogs

Objective— To evaluate factors that predispose to tibial tuberosity (TT) fracture after tibial plateau leveling osteotomy (TPLO) in dogs.
Study Design— Retrospective study.
Animals— Dogs (n=182) with cranial cruciate ligament (CCL) rupture undergoing 213 TPLO surgeries.
Methods— Medical records and radiographs of 2 groups of dogs that had TPLO surgery (2000–2001, 2004–2005) were evaluated to determine the effect of operative technique and surgeon experience on TT fracture.
Results— TT fracture was diagnosed in 8 dogs (9 TPLO, 4.2% of surgical procedures). Four fractures occurred after unilateral TPLO in 167 dogs (2.4%), 4 fractures occurred after simultaneous bilateral TPLO in 5 dogs (40%), and 1 fracture occurred after staged bilateral TPLO in 36 dogs (2.8%). Simultaneous bilateral TPLO resulted in a 12.4 times higher odds of TT fracture versus unilateral TPLO ( P =.046). The mean absolute thickness of the TT after TPLO was less in dogs sustaining TT fractures (7.2 ± 2.2 mm) than those that did not (10.8 ± 2.7 mm, P <.0001). The odds of fracture decreased by 37% when the absolute TT width postosteotomy increased by 1 mm ( P <.0001). An increase in tibial plateau angle at follow-up versus immediately postoperative was associated with TT fracture ( P =.025). Surgeon experience was not associated with TT fracture.
Conclusion— A combination of surgical decision-making and surgical technique play a role in the occurrence of TT fracture after TPLO. Simultaneous bilateral TPLO was associated with a high percentage of TT fracture.
Clinical Relevance— Careful planning of osteotomy positioning is advised while performing TPLO surgery.     

High prevalence of intestinal zoonotic parasites in dogs from Belgrade, Serbia--short communication

To identify areas of risk for canine-related zoonoses in Serbia, the aim of this study was to provide baseline knowledge about intestinal parasites in 151 dogs (65 household pets, 75 stray and 11 military working dogs) from Belgrade. The following parasites, with their respective prevalences, were detected: Giardia duodenalis (14.6%), Ancylostomatidae (24.5%), Toxocara canis (30.5%), Trichuris vulpis (47.0%) and Taenia-type helminths (6.6%). Of all examined dogs, 75.5% (114/151) were found to harbour at least one parasite species. Of these, mixed infections with up to four species per dog occurred in 44.7% (51/114). Infections with all detected species were significantly higher (p < 0.05) in military working (100%) and stray dogs (93.3%) versus household pets (50.8%). Among all parasites, agents with zoonotic potential including Giardia, Ancylostomatidae and Toxocara were detected in 58.3% (88/151) of all examined dogs with a significant difference (p < 0.05) among the subgroups (100%, 62.7% and 46.2% for military working dogs, stray dogs and household pets, respectively). The high prevalence of zoonotic parasites registered in the dog population from a highly urban area in south-eastern Europe indicates a potential risk to human health. Thus, veterinarians should play an important role in helping to prevent or minimise zoonotic transmission.     

Comparison of mouse and rabbit model for the assessment of strong PGM-containing oil-based adjuvants

Peptidoglycan monomer (PGM) is an adjuvant active molecule with potential for use in human and veterinary vaccine. PGM's action is short-lived in mammals hence its effects might be limited. Novel PGM-containing oil-based formulations have been developed recently by incorporation of PGM into Montanide ISA720 and ISA206 adjuvants with the aim to prolong and improve immunostimulating activities of PGM. In the present work we studied the efficacy of such novel adjuvant formulations using two different antigens, ovalbumin and snake venom, respectively. Novel formulations were also tested in two experimental models, mice and rabbits. In rabbits the incorporation of PGM into oil-based adjuvants led to overall improvement of antigen-specific IgG response. However, in the mouse model, under experimental conditions used, it was not possible to distinguish differences in antigen-specific IgG response among several strong oil-based adjuvant formulations.     

Evidence of scientific research on organic plant breeding: A bibliometric study

Use of varieties bred under organic conditions is essential in order to minimize the yield gap between organic and conventional agriculture. The aim of this study was to analyse research publications related to the topic ‘organic plant breeding’ from the Web of Science database using bibliometric science mapping and visualization tools. The number of analysed documents in the bibliographic dataset was 204 from the 53 sources. The overall trend in the organic plant breeding literature showed that the number of publications increased during the observed time-span. We found that in total, 65 countries and 337 institutions are active in the field of organic plant breeding with a high degree of international collaboration. The top five countries according to the number of publications were the United States, Italy, Germany, France, and Canada, while the most active institutions were Wageningen University, Iowa State University, University of Alberta, University of Copenhagen, and University of Hohenheim. All keywords from the organic plant breeding research in the agronomy category were separated into seven clusters for different research topics. Although there is evident progress viewed through the increased trend in the number of publications, organic plant breeding needs further expansion and development. This is especially through the implementation of novel plant breeding techniques and methods aiming to improve traits that are highly specific to organic conditions.     

How the deadwood of different tree species in various stages of decomposition affected nutrient dynamics?

Purpose

The aim of the study was to estimate how the deadwood of different tree species in various stages of decomposition affected nutrient dynamics.

Materials and methods

The deadwood of eight species (common alder, common aspen, common ash, silver fir, pedunculate oak, Norway spruce, common hornbeam and silver birch) was selected. Three logs from each species in the third, fourth and fifth decay classes were chosen for analysis. Wood in the third decay class was characterised by larger hard fragments, fragmented bark and no branches; in the fourth decay class, it was characterised by small pieces and a fragmented bark; and in the fifth decay class, it was characterised by a soft texture and no bark. The investigation was carried out in the Czarna Rózga Reserve in Central Poland. Tension lysimeters were installed under each log in the humus horizon. The water samples collected from tension lysimeters were chemically analysed in the laboratory. The water chemistry was analysed by means of ion chromatography using a DIONEX ICS 5000 unit.

Results and discussion

The leachate obtained from different tree species contained different ion concentrations. The high similarity of the concentration of total anions and statistically significant differences in the content of total cations were determined in the leachate from the wood of coniferous and deciduous species. The concentration of the cations increases with the advancement of the decomposition level. A general linear model analysis demonstrates that wood species and the decomposition classes are of equal importance in defining the ion composition of the filtrate leaching from deadwood.

Conclusions

Wood at the highest decomposition stage releases more ions to the surface soil layers than wood at the lower decay class. An exception from the rule is the wood of birch, which in the III decay class releases more ions than in its higher decay classes. When comparing the ionic composition of leachate released from wood of coniferous and deciduous tree species, the latter are characterised by higher cation concentrations in comparison with coniferous species. Among the deciduous species, wood of such species as ash, hornbeam, aspen, birch and alder has the most favourable effects on the soil surface horizons through its supply with ionic substances. The ash wood releases high amounts of calcium, hornbeam wood releases magnesium and sodium, and aspen releases calcium, potassium and nitrate anion. From the analysed coniferous species, fir wood has a more favourable effect in terms of ion release to soil than spruce wood.