Impact of Methylenetetrahydrofolate Reductase C677T Polymorphism on the Risk of Gastric Cancer and Its Interaction with Helicobacter pylori Infection

Background

Attempts for early detection of gastric cancer have recently focused on host''s genetic susceptibility factors and gene-environment interactions. We have, herein, studied the association of MTHFR C677T single nucleotide polymorphism (SNP) and its interaction with Helicobacter pylori infection, smoking, age and gender on the risk of gastric cancer among an Iranian population.

Methods

Gastric cancer patients (n = 450) and cancer-free controls (n = 780) were studied for serum H. pylori-specific IgG antibodies by ELISA and MTHFR C677T polymorphism (SNP) by PCR-RFLP. Demographic and life style data were collected through patient interviews. Unconditional logistic regression model estimated odds ratio (OR) and the corresponding 95% confidence intervals (CI).

Results

The interactions of MTHFR genotype with H. pylori infection (P = 0.03), age (P = 0.049) and gender (P = 0.007) were statistically significant. Accordingly, MTHFR C677T carriers who were also positive for H. pylori infection exhibited 80% (OR = 1.8, 95% CI = 1.0-2.9) significant excess risk of non-cardia gastric cancer. Furthermore, subjects over the age of 50 or female subjects carrying MTHFR C677T SNP showed 40 (OR = 1.4, 95% CI = 1.0-2.0) and 100 (OR = 2.0, 95% CI = 1.2-3.2) percent increased risk of gastric cancer, respectively.

Conclusion

MTHFR C677T SNP seems to increase the risk of gastric cancer and the effect is significantly inflated by interactions with H. pylori infection, age and gender. Key Words: Helicobacter pylori, Smoking, Gender identity, Age group, Methylenetetrahydrofolate reductase     

Millet forage yield and silage quality as affected by water and nitrogen application at different sowing dates

This experiment was conducted to evaluate the effects of two irrigation regimes (control and water stress) and two nitrogen (N) levels (0 and 112.5 kg/ha) on forage yield and silage quality in millet. Bastan (Setaria italica (L.) P. Beauv) and Pishahang (Panicum miliaceum) were sown at two different dates during 2015 and 2016. Both cultivars exhibited reduced dry-matter (DM) yields (45% and 51% in Bastan and Pishahang respectively) due to drought stress. Proline and phenolic contents increased as a result of drought and were significantly and negatively correlated with DM yield and digestibility. Moreover, Pishahang had a reduced acid detergent fibre (ADF) content but improved leaf/stem ratio, digestible dry matter (DDM), relative feed value (RFV), net energy for lactation (NE_L), digestibility and silage quality as a result of drought stress, while no significant effects on these traits were observed in Bastan. Silage quality was greatly cultivar-dependent. Both cultivars had higher levels of DDM, RFV and NE_L at early sowing dates. Nitrogen supply had greater positive effects on increasing ash, crude protein (CP) content and DM yield under normal irrigation than under water-stress conditions. In summary, given the importance of the energy received per unit of forage from an animal husbandry viewpoint and the significance of DM yield per unit area from an agricultural viewpoint, the obtained results might help farmers in choosing not only the best sowing dates but also proper irrigation and N management practices to achieve their quantitative and qualitative objectives in forage production.     

Mitochondrial DNA Copy Number Variations and Serum Pepsinogen Levels for Risk Assessment in Gastric Cancer

Background:Variations in mtDNA-CN of PBLs, as a potential biomarker for GC screening has currently been subject to controversy. Herein, we have assessed its efficiency in GC screening, in parallel and in combination with sPG I/II ratio, as an established indicator of gastric atrophy. Methods:The study population included GC (n = 53) and non-GC (n = 207) dyspeptic patients. The non-GC group was histologically categorized into CG (n = 104) and NM (n = 103) subgroups. The MtDNA-CN of PBLs was measured by quantitative real-time PCR. The sPG I and II levels and anti-H. pylori serum IgG were measured by ELISA. Results:The mtDNA-CN was found significantly higher in GC vs. non-GC (OR = 3.0; 95% CI = 1.4, 6.4) subjects. Conversely, GC patients had significantly lower sPG I/II ratio than the non-GC (OR = 3.2; CI = 1.4, 7.2) subjects. The combination of these two biomarkers yielded a dramatic amplification of the odds of GC risk in double-positive (high mtDNA-CN-low sPGI/II) subjects, in reference to double-negatives (low mtDNA-CN-high sPGI/II), when assessed against non-GC (OR = 27.1; CI = 5.0, 147.3), CG (OR = 13.1; CI = 2.4, 72.6), or NM (OR = 49.5; CI = 7.9, 311.6) groups. Conclusion:The combination of these two biomarkers, namely mtDNA-CN in PBLs and serum PG I/II ratio, drastically enhanced the efficiency of GC risk assessment, which calls for further validations. Key Words: Biomarkers, DNA copy number variation, Mitochondrial DNA, Stomach neoplasms     

Nonthiol ACE inhibitors, enalapril and lisinopril are unable to protect mitochondrial toxicity due to paraquat

Angiotensin-converting enzyme inhibitors (ACEi) were shown to ameliorate endothelial dysfunction in various human diseases and some of these inhibitors have been reported to enhance antioxidant defenses. The objective of the present study was to shown the abilities of enalapril and lisinopril as two nonthiol ACEi on mitochondrial toxicity due to paraquat. In this study, mitochondrial isolation from rat liver was divided into six groups. Group 1 was considered as control, group 2 received paraquat (5 mM), group 3 received enalapril (0.25 mM), group 4 received lisinopril (0.01 mM), group 5 received paraquat (5 mM) + enalapril (0.25 mM), and group 6 received paraquat(5 mM) + lisinopril (0.01 mM). Viability, lipid peroxidation, catalase activity, GSH (reduced glutathione) and GSSG (oxidized glutathione) concentrations were also determined. Simultaneous treatment of mitochondria with enalapril (0.25 mM) + paraquat (5 mM) and lisinopril (0.0.01 mM) + paraquat (5 mM) did not significantly ameliorate the mitochondrial toxicity induced by paraquat (5 mM) alone (p > 0.05). However, the nonthiol ACEi, enalapril showed to partially improve target of lipid peroxidation due to paraquat. In conclusion, nonthiol ACEi treatment did not improve the increased oxidative stress and the decreased antioxidant mechanisms.     

Responses of Four Rice Varieties to Elevated CO2 and Different Salinity Levels

This study was carried out in 2014 at Isfahan University of Technology, Iran, to evaluate the responses of four rice varieties(Neda, Deylamani, Shiroudi and Domsorkh) to ambient(360 ± 50 μmol/mol) and elevated(700 ± 50 μmol/mol) air carbon dioxide(CO_2) concentrations under four salinity levels(0, 30, 60 and 90 mmol/L Na Cl). There was significant variation among rice varieties in response to elevated CO_2 concentration under the four salinity levels. Under non-saline condition, elevated CO_2 increased the dry weight of Neda, Deylamani and Domsorkh by 8%, 50% and 8%, respectively, but reversely decreased that of Shiroudi by 34%. Increasing CO_2 concentration significantly reduced the negative effects of salinity on Shiroudi, but these effects were even increased in Deylamani and Domsorkh under all the salinity levels and in Neda only under 30 and 60 mmol/L Na Cl. Significant correlations were established between plant dry weight, SPAD value and leaf area under both CO_2 levels. However, this trend was observed only at ambient CO_2 concentration in the presence of soluble carbohydrates. The results revealed the genotype and salinity dependence of the effects of CO_2 concentrations on the rice traits investigated.     

Evaluation of forage maize yield gap using an integrated crop simulation model-satellite imagery method (Case study: four watershed basins in Golestan Province)

The yield gap provides a guide for prioritization of crop management options (such as optimized sowing date, seeding rate, irrigation schedule, soil fertility, fertilizer application, weed and pest control) in a studied area. This study aimed to determine the maize yield gap in four major watersheds in Golestan Province, Iran, using an integrated crop simulation model-satellite imagery method. The actual yield estimated by the NDVI (as the selected index) was between 8.89 and 20.40 t ha^?1, while the potential yield is between 19.03 and 22.35 t ha^?1. About 91.76% of the studied area had a yield less than 85% of the potential yield. The lowest actual yield was in the south, southeast, and north of the study area. The yield gap was estimated between 0 to 11.76 t ha^?1 and 66.66% of maize farms yield gap was between 3.5 to 5.5 t ha^?1. The yield gap fraction changed between 0 and 0.57. The results showed that soil-dependent variables, slope, and fluctuation in farm management factors (plant density, planting, irrigation, and various methods of weed control) caused the yield gap. High yield gap indicates that there is an opportunity to increase production through managerial optimization or excluding maize from cropping patterns.     

Effects of foliar spray of nano-particles of FeSO4 on the growth and ion content of sunflower under saline condition

This study investigated the effects of foliar spray of normal and nano-particles of iron sulfate (FeSO₄) on the response of sunflower cultivars to salinity. Treatments included five cultivars (Alstar, Olsion, Yourflor, Hysun36 and Hysun33), two salinity levels (0 and 100 mM sodium chloride (NaCl)), and three levels of fertilizer application. Fertilizer treatments were the foliar application of normal and nano-particles of FeSO₄. Foliar application of FeSO₄ in either form increased leaf area, shoot dry weight, net carbon dioxide (CO₂) assimilation rate (A), sub-stomatal CO₂ concentration (Ci), chlorophyll content, Fv/Fm and iron (Fe) content and decreased sodium (Na) content in leaves. The extent of increase in chlorophyll a content by foliar spray of FeSO₄ nano-particles was significantly greater than normal form. The results showed that the FeSO₄ nano-particles increased biomass production of sunflower plants greater in comparison with normal form, although no significant difference was found between two forms.     

A new tomato-infecting tospovirus from iran

ABSTRACT A new tospovirus species serologically distinct from all other established tospoviruses was found in tomato in Iran. Typical disease symptoms observed include necrotic lesions on the leaves and yellow ring spots on the fruits, hence the name Tomato yellow ring virus (TYRV) was proposed. The S RNA of this virus was cloned and its 3,061 nucleotide long sequence showed features characteristic for tospoviral S RNA segments. The nucleocapsid (N) protein with a predicted Mr of 30.0 kDa showed closest relationship to the N protein of Iris yellow spot virus (74% sequence identity).     

The pupillary light reflex and menace response in neonatal calves: the role of environmental isolation on development of the menace response

The aim of this study was to investigate the development of the pupillary light reflex in neonatal calves and the effect on the development of the menace response of keeping them in individual stalls. Seventy-three Holstein calves were divided into test (n = 44) and control (n = 29) groups and the animals were kept in individual stalls for the first 32 ± 4 and 73 ± 5 days post partum, respectively. They were then moved to group pens. All calves in both groups were observed daily from the first day after birth until the pupillary light reflex and menace response had become well established.All 73 calves had a positive pupillary light reflex on the first day post partum. None of the animals developed a menace response during the time they were housed in individual stalls. Over 14 days (test group) and 12 days (control group) after the calves had been moved to the group pens they became positive to the menace response at ages 41 ± 4 and 81 ± 5 days, respectively. The Mann–Whitney test revealed a significant difference (P < 0.001) in the ages of the calves with positive menace responses between groups. Group rearing may produce more visual threats to the eyes and the calves learn the menace response by closing the lids in response to sudden alarming movements.