Evolution of introduced Chinook salmon (Oncorhynchus tshawytscha) in Lake Huron: emergence of population genetic structure in less than 10 generations

Abstract – Population genetic structure was detected in Chinook salmon Oncorhynchus tshawytscha in their non‐native range of Lake Huron using microsatellite DNA. All Chinook salmon in this system descend from Green River, Washington cohorts, originally transplanted to Michigan hatcheries in the late 1960s. We tested for population genetic differentiation of age 0 fish collected from 13 rivers and two hatcheries in 2007. The amount of genetic differentiation among collection sites was low but statistically significant, with F_ST values ranging from 0.036 to 0.133 and R_ST values ranging from 0.008 to 0.157 for specific loci. Based on pairwise F_ST and R_ST values and Bayesian cluster analysis, the Maitland River population in the Main Basin of Lake Huron was genetically distinct from the remaining collection sites. Based on analysis of bycatch data from commercial gill net fisheries, Chinook salmon likely colonised the Main Basin by 1975 (10 generations ago) and the North Channel and southern Georgian Bay regions by 1980 (eight generations ago). Thus, population genetic structure has emerged in Lake Huron Chinook salmon in <10 generations.     

Bovine paramphistomosis in Galicia (Spain): Prevalence,intensity, aetiology and geospatial distribution of the infection

The present study explored various basic aspects of the epidemiology of paramphistomosis in Galicia, the main cattle producing region in Spain. In total, 589 cows from different farms located across the region were selected at random in the slaughterhouse for examination of the rumens and reticula for the presence of Paramphistomidae flukes. Paramphistomes were found in 111 of 589 necropsied cows (18.8%; 95% CI: 15.7–21.9%), with higher prevalences of infection in beef cows than in dairy cows (29.2% vs 13.9%). Although the number of flukes per animal was generally low (median = 266 flukes), some cows harboured large parasite burdens (up to 11,895 flukes), which may have harmful effects on their health or productivity. Cows with higher parasite burdens also excreted greater numbers of fluke eggs in their faeces, which suggests that heavily parasitized mature cows play an important role in the transmission of paramphistomosis. This role may be particularly important in Galicia, where the roe deer, which is the only wild ruminant in the study area, was found not to be a reservoir for the infection. The use of morpho-anatomical and molecular techniques applied to a large number of fluke specimens provided reliable confirmation that Calicophoron daubneyi is the only species of the family Paramphistomidae that parasitizes cattle in Galicia. The environmental data from the farms of origin of the necropsied cows were used in Bayesian geostatistical models to predict the probability of infection by C. daubneyi throughout the region. The results revealed the role of environmental risk factors in explaining the geographical heterogeneity in the probability of infection in beef and dairy cattle. These explanatory factors were used to construct predictive maps showing the areas with the highest predicted risk of infection as well as the uncertainty associated with the predictions.     

Efficiency and effectiveness in representative reserve design in Canada: The contribution of existing protected areas

To be effective, reserve networks should represent all target species in protected areas that are large enough to ensure species persistence. Given limited resources to set aside protected areas for biodiversity conservation, and competing land uses, a prime consideration for the design of reserve networks is efficiency (the maximum biodiversity represented in a minimum number of sites). However, to be effective, networks may sacrifice efficiency. We used reserve selection algorithms to determine whether collections of existing individual protected areas in Canada were efficient and/or effective in terms of representing the diversity of disturbance-sensitive mammals in Canada in comparison to (1) an optimal network of reserves, and (2) sites selected at random. Unlike previous studies, we restricted our analysis to individual protected areas that met a criterion for minimum reserve size, to address issues of representation and persistence simultaneously. We also tested for effectiveness and efficiency using historical and present-day data to see whether protected area efficiency and/or effectiveness varied over time. In general, existing protected areas did not effectively capture the full suite of mammalian species diversity, nor are most existing protected areas part of a near-optimal solution set. To be effective, Canada’s network of reserves will require at minimum 22 additional areas of >2700 km². This study shows that even when only those reserves large enough to be effective are considered, protected areas systems may not be representative, nor were they representative at the time of establishment.     

Developing and validating microsatellite markers in elephant grass (<Emphasis Type="Italic">Pennisetum purpureum</Emphasis> S.)

Elephant grass [Pennisetum purpureum S.; syn. Cenchrus purpureus (Schumach.) Morrone] is an important global forage crop and is recognized for high yields of herbage with good nutritive value. It also has high biomass potential to be utilized as a biofuel feedstock. Whereas several previous genetic studies adapted simple sequence repeat (SSR) markers from pearl millet [Pennisetum glaucum (L.) R.Br.] for investigations in elephant grass, the present study developed SSR markers from 3536 DNA sequences derived from 16 elephant grass entries. A total of 3866 SSRs were identified including 1028 monomeric, 2019 dimeric, 735 trimeric, 49 tetrameric, 20 pentameric and 15 hexameric repeat motifs. Three hundred and seven sequences contained more than one repeated motif, and 154 SSRs were present in compound formation. Susequenctly,  four elephant grass and two pearl millet genotypes were chosen to validate 727 SSR markers. Of these, 628 markers produced visually detectable amplification products, including 73 (11.6%) polymorphic ones across all six genotypes. Polymorphism between the four elephant grass genotypes was revealed by 316 (50.6%) markers with diversity index values ranging from 0.75 to 0.38. Dimeric SSRs had the highest polymorphic rate (48.7%). These validated SSR markers had 58.6% (368 of 628) transferability rate to pearl millet. The availability of these polymorphic SSR markers will support advanced genetic studies in P. purpureum and its relatives.     

Nutraceutical,Physicochemical, and Sensory Properties of Blue Corn polvorones,a Traditional Flour-Based Confectionery

Blue corn is an anthocyanin-rich material that can be used in the preparation of baking products. The aim of this work was to evaluate the physicochemical, nutraceutical, and sensory properties of polvorones (a traditional flour-based confectionery) made with whole blue-corn flour. All samples showed similar bromatological composition, but polvorones from whole blue-corn flour had a higher phenolics (837.1 mg gallic acid/kg) and anthocyanins (373.0 mg cyanidin-3-glucoside/kg) content, which exerted an influence on their higher antioxidant activity compared with wheat flour-based laboratory and commercial samples. The transformation of raw blue-corn flour into polvorones produced the degradation of some acylated anthocyanins into non-acylated forms. The substitution of wheat flour with whole blue-corn flour enhanced overall acceptability, as well as the color and flavor of polvorones. Our findings demonstrated that it is possible to use whole blue corn in the formulation of polvorones with more health beneficial properties and better consumer acceptability than refined wheat products.     

Vasorelaxant activity of some structurally related triterpenic acids from Phoradendron reichenbachianum (Viscaceae) mainly by NO production: ex vivo and in silico studies

The aim of the current study was to investigate the vasorelaxant activity of five structurally-related triterpenic acids namely ursolic (1), moronic (2), morolic (3), betulinic (4) and 3,4-seco-olean-18-ene-3,28-dioic (5) acids. The vasorelaxant effect of compounds 1-5 were determined on endothelium-denuded and endothelium-intact rat aortic rings pre-contracted with noradrenaline (0.1 μM). All compounds showed significant relaxant effect on endothelium-intact vessels in a concentration-dependent manner (p<0.05). Ursolic, moronic and betulinic acids were the most potent vasorelaxant agents with 11.7, 16.11 and 58.46 μM, respectively. Since vasorelaxation was blocked by L-NAME, while indomethacin did not inhibit the effect, endothelium-derived nitric oxide seems to be involved in triterpenic 2 and 3 mode of action. Compounds 1-5 were docked with a crystal structure of eNOS. Triterpenes 1-5 showed calculated affinity with eNOS in the C1 and C2 binding pockets, near the catalytic site; Ser248 and Asp480 are the residues that make hydrogen bonds with the triterpene compounds.     

Models to distinguish effects of landscape patterns and human population pressures associated with species loss in Canadian national parks

It is widely accepted that large protected areas are required to effectively conserve historical species composition. However, recent analyses of mammal species loss in Canadian and African national parks contradict earlier conclusions that extent of local extinctions (i.e., extirpations) is strongly inversely related to park size, suggesting that park size alone is inadequate to predict reserve designs that may sustain biodiversity. To plan protected areas that will meet conservation goals, reserve-design models that incorporate other landscape-scale factors in addition to reserve area are needed; potential factors include the types and intensity of land use and habitat change, together with land cover types, in and around parks. Additionally, human population size around parks, and visitor density in parks may affect species loss. We quantified land use, land cover, and human population in and around 24 Canadian national parks to model effects of human disturbance and changes in natural habitats on known mammal extirpations.Multiple regression models were compared using the Akaike Information Criterion (AIC_c). The most parsimonious model (AIC_c weighting w _i = 0.5391) emphasized effective habitat area in and around parks and not visitor numbers nor human population size around parks. Our model suggests that parks with as little as 3140 km² of effective habitat area inside may be large enough to conserve historical mammal species composition if they are also surrounded by at least 18 000 km² of effective habitat within 50 km of park boundaries.     

Is it common to be rare on the landscape? A test using a novel model system

Context

Understanding how rare species are distributed can be difficult due to heterogeneity between landscape units. Lack of statistical replication of landscapes can make it difficult to carry out testing. Model systems may be a solution.

Objectives

We test whether lichen thalli along the trunk of a tree are analogous to habitat patches in a kilometers-extent landscape and hence can function as a model system. This model system allows for increased statistical power. We use this system to test whether landscapes with rare species are different from those without.

Methods

We sampled macrolichen diversity along the trunk of 24 balsam fir trees in a stand on the Avalon Peninsula, Newfoundland, Canada, along with microclimate variables. We analysed difference in pattern by aspect and along the gradient of 1 m up the trunk as well as between trees containing the rare Erioderma pedicellatum and those without.

Results

We found no difference in total patch richness or abundance between the micro-landscapes. We found significantly consistent patterns in lichen patches along the trunk. These patterns were similar on the trees with the rare species. Lichen species richness did not differ between trees containing the rare species versus those that did not.

Conclusions

Lichen patch pattern is statistically similar between trees and as such, these can be considered as replicate landscape units. Thus, landscape ecologists can use micro-landscapes as model systems to conduct observational and manipulative experiments to test questions about spatial pattern and process, such as those concerning distribution of rare species.

     

Reducing Beta-Glucan Solubility in Oat Bran Muffins by Freeze-Thaw Treatment Attenuates Its Hypoglycemic Effect

The viscosity of soluble fibers such as β-glucan depends on their concentration in solution and molecular weight (MW) distribution. We investigated whether freezing treatment of oat bran muffins affected the physicochemical properties of β-glucan, and its physiological effectiveness in lowering postprandial blood glucose response. A controlled range of β-glucan solubility was achieved by subjecting oat bran muffins containing two levels of β-glucan to repeated freeze-thaw temperature cycling. β-Glucan solubilized by in vitro digestion extraction was measured by flow-injection analysis. MW distributions of β-glucan were analyzed using size-exclusion chromatography. β-Glucan solubility decreased as the number of freeze-thaw cycles increased, while MW distribution of β-glucan decreased slightly. Peak blood glucose rise (PBGR) after fresh muffins (8 and 12 g of β-glucan/serving) was significantly lower than that after muffins (8 and 12 g of β-glucan/serving) treated with four freeze-thaw (FT) cycles (1.84 ± 0.2 vs. 2.31 ± 0.1 mmol/L, P = 0.007). Compared with the control whole wheat muffins, the reduction in incremental area under the glucose response curve (AUC) after fresh muffins (8 and 12 g of β-glucan/serving) was nearly twice that after 4 FT cycles (43.3 ± 4.4% vs. 27.0 ± 5.4%, P = 0.016). A significant inverse linear relationship was found between the log [concentration] of extractable β-glucan and PBGR (r² = 0.85, P = 0.01), and AUC (r² = 0.71, P = 0.03). The results show that reduction of β-glucan solubility in foods attenuates its physiological effectiveness in lowering postprandial glycemia.