Potential of a national monitoring program for forests to assess change in high-latitude ecosystems

Broad-scale monitoring in Alaska has become of increasing interest due to uncertainty about the potential impacts of changing climate on high-latitude ecosystems. The Forest Inventory and Analysis (FIA) program is a national monitoring program for all public and private forestlands in the US, but the program is not currently implemented in the boreal region of Alaska. We provide an overview of the strengths and weaknesses of the FIA system for monitoring the potential impact of climate change on Alaska’s species, communities, and ecosystems. The primary strength of the system is a scientifically rigorous design-based statistical estimation method that produces estimates of forest attributes with known sampling error and quantifiable measurement error. The weaknesses of the system include low power for small area estimates, lack of spatial context and contiguity, and difficulty in inferring causality of factors when changes in monitored attributes are detected.Climate change is expected to impact many components of boreal ecosystems, but for most indicators the direction and magnitude of change are difficult to predict because of complex interactions among system components. Status and trend information provided by FIA monitoring that could be helpful to conservation decisions includes abundance and rarity of vascular plants, invasive species, biomass and carbon content of vegetation, shifting vegetation species distribution, disturbance frequency, type, and impact, and wildlife habitat characteristics. Because of unique factors such as the low level of infrastructure, modifications to the FIA monitoring system used in the conterminous US have been proposed for Alaska. Remote sensing data would play a greater role in meeting monitoring objectives, and sampling intensity of field plots would be reduced. Coordination with other national, regional, and local monitoring efforts provides potential for increased understanding of change in boreal ecosystems at multiple scales.     

The effects of including marine ecological values in terrestrial reserve planning for a forest-nesting seabird

Theoretical advances in systematic reserve design aim to promote the efficient use of limited conservation resources and to increase the likelihood that reserve networks enhance the persistence of valued species and ecosystems. However, these methods have rarely been applied to species that rely on spatially disjunct habitats. We used the marbled murrelet, a seabird that requires old-growth forest in which to nest and high quality marine habitats in which to forage, as a case study to explore methods of incorporating multiple ecological values into single species spatial reserve design. Specifically, we used the cost function in MARXAN to include the ecological value of marine habitats while identifying spatial solutions for terrestrial nesting habitat reserves. Including marine values influenced terrestrial reserve designs most when terrestrial habitat targets were low and little or none of the target was represented in pre-existing protected areas. Our results suggest that including marine values in the planning process will influence marbled murrelet terrestrial reserve designs most where substantial terrestrial nesting habitat still exists, where new reserves are relatively unconstrained by pre-existing reserves, or when conservation resources only allow the protection of a small fraction of available habitat. This paper presents a novel framework for incorporating multiple measures of ecological value in the spatial reserve design process and should be particularly useful for species that rely on multiple habitats during their life cycle.     

Prevalence of Gastric Ulcerations in Horses with Colic

The goal of this study was to determine the prevalence of gastric ulcers in horses with acute abdominal crisis (colic) and to examine the temporal effect of hospitalization on ulcer development in equine patients treated for colic. In addition, other factors that may be associated with gastric ulceration were also explored. The study design was a prospective original study incorporating 169 horses that presented to the George D. Widener Hospital for examination. One hundred and twelve horses presenting with the chief complaint of colic were included in the study group, and 57 horses that presented for non-colic or nonemergency complaints were evaluated and included as case controls. Gastroscopy was performed on equine patients presenting with the chief complaint of colic or horses presenting for reasons other than colic (control); mucosal changes were scored 0 to 3. Additionally, horses presenting for colic were gastroscopically evaluated twice during a 5-day period. Medical records were reviewed for history, clinical findings, laboratory results, and treatment. Seventy-six of 112 horses presenting with the chief complaint of colic had gastric ulceration compared with 41 of 57 horses in the control group. There was a significant association between age of the patient and chief complaint (ie, colic vs control) and between breed and chief complaint. There was no association between gastric ulcer score and chief complaint (colic vs control). Thirty-eight of the 112 horses presenting with colic deteriorated in ulcer score while hospitalized. Using a Pearson chi-squared test, there was no statistically significant association between gastric ulceration with age, breed, or sex. Horses with gastric ulceration in the colic group had lower packed cell volumes compared with horses presenting with colic without gastric ulcers, and this was statistically significant (P < .001). The high incidence of gastric ulceration in the study and control groups supports the reports of other investigators that gastric ulcers in horses, no matter the presenting complaint, are widespread. There was a significant association between breed and chief complaint (P = .005); however, breed and outcome of gastric ulceration were not related (Thoroughbreds were the least likely breed to present for colic). Although a trend in increasing gastric ulceration was seen in hospitalized colic patients, it was not statistically significant. This suggests that horses that are hospitalized may be at increased risk for developing gastric ulcers because of stress, feed deprivation, and administration of treatment. Thus, horses that present for colic should be gastroscopically evaluated if clinical signs raise the index of suspicion for gastric ulceration.     

Crystal structure analysis of deamino-oxytocin: conformational flexibility and receptor binding

Two crystal structures of deamino-oxytocin have been determined at better than 1.1A resolution from isomorphous replacement and anomalous scattering x-ray measurements. In each of two crystal forms there are two closely related conformers with disulfide bridges of different chirality, which may be important in receptor recognition and activation.     

A comparison of three land-based containment systems for use in culturing green sea urchins, Strongylocentrotus droebachiensis (Müller) (Echinodermata: Echinoidea)

Worldwide, most sea‐urchin populations are in decline. Future market demands will likely be met through aquaculture, which may consist of gonad enhancement of wild‐caught sea urchins. In this context, we examined three land‐based containment systems for suitability in maintaining commercial‐size green sea urchins (Strongylocentrotus droebachiensis). Mortality rate, gonad quantity, gonad quality (colour, brightness, firmness, texture) and cleaning efficiency associated with each containment system were the criteria for comparing the effectiveness of the systems (large raceways, small raceways and washtub tanks). After 6 weeks, urchins maintained in large raceways displayed significantly higher mortality rates than urchins maintained in either the small raceways or washtub tanks (mean±SD: 24.3±10.4%, 8.0±3.5% and 4.3±1.5% respectively). Significant differences in cleaning time were detected among the three systems with washtub tanks requiring significantly more cleaning time (0.11±0.02 min urchin^?1) than the other two systems and large raceways requiring significantly less cleaning time (0.06±0.02 min urchin^?1) than the other two systems. No significant differences in gonad characteristics were detected among the three containment systems. Because of the higher mortality rate in the large raceways and the increased cleaning time required for the washtub tanks, the small raceways were considered to be the best of the three systems tested.     

Enhancement of photochemical smog by n,n'-diethylhydroxylamine in polluted ambient air

A recent proposal for controlling photochemical smog by the addition to ambient air of 0.03 to 0.05 part per million of diethylhydroxylamine (DEHA) is shown to be invalid. The addition of DEHA in the range of 0.05 to 0.5 part per million to ambient air irradiated with sunlight in a dual outdoor environmental chamber caused marked increases in the rates of formation and concentrations of ozone, peroxyacetyl nitrate, and light-scattering particles.     

Serine-7 of the RNA polymerase II CTD is specifically required for snRNA gene expression

RNA polymerase II (Pol II) transcribes genes that encode proteins and noncoding small nuclear RNAs (snRNAs). The carboxyl-terminal repeat domain (CTD) of the largest subunit of mammalian RNA Pol II, comprising tandem repeats of the heptapeptide consensus Tyr1-Ser2-Pro3-Thr4-Ser5-Pro6-Ser7, is required for expression of both gene types. We show that mutation of serine-7 to alanine causes a specific defect in snRNA gene expression. We also present evidence that phosphorylation of serine-7 facilitates interaction with the snRNA gene-specific Integrator complex. These findings assign a biological function to this amino acid and highlight a gene type-specific requirement for a residue within the CTD heptapeptide, supporting the existence of a CTD code.