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为了对异源抗体对接方法预测流感病毒血凝素B细胞构象表位的可行性进行分析,本研究基于蛋白质相互作用界面的形状互补理论,使用异源抗体(来自于抗原抗体复合物1G9M、1RVF、1TPX、1NCA、1A2Y)的晶体结构同流感病毒血凝素(A/Aichi/2/68(H3N2))的晶体结构进行刚性分子对接,通过计算B细胞表位的预测表面和实际表面C-α原子之间的RSMD以及表位氨基酸的准确率,分析用异源抗体探测出血凝素B细胞表位的可能性。结果表明,不同的异源抗体均可结合到A/Aichi/2/68(H3N2)的已知B细胞表位,最佳的对接构象与原晶体结构重叠后表位残基C-α原子的均方根偏差均小于0.6埃,表位氨基酸预测的准确性大于60%,说明异源抗体对接方法可以尝试用于B细胞构象表位的预测。 相似文献
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为明确水稻抗性基因Piz-t、Pib和Pii的有效性,利用无毒基因AvrPiz-t、AvrPib和Avr-Pii的特异性引物对自云南省6个水稻产区采集并分离获得的348株稻瘟病菌Magnaporthe oryzae菌株进行PCR扩增检测,并测定其对仅含Piz-t、Pib和Pii基因的水稻抗性单基因系IRBLzt-T、IRBLb-B和IRBLi-F5品种的致病性,明确这3个无毒基因在云南省水稻产区组成及分布。结果表明,在348株稻瘟病菌菌株中,分别有51.7%、46.8%和15.8%的菌株含有无毒基因AvrPiz-t、AvrPib和Avr-Pii,GT8、GT2、GT5、GT6、GT1、GT3、GT4和GT7基因型菌株检测频率分别为24.7%、21.8%、21.0%、16.7%、4.9%、4.0%、3.4%和3.4%;分别有4.9%、29.2%、41.1%和24.7%的菌株含有3、2、1和0个无毒基因;云南省稻瘟病菌群体总多样性指数水平较高,为2.81,其中滇中水稻产区的最高,为2.97;在348株稻瘟病菌菌株中,分别有89.1%、63.2%和38.5%的菌株对单基因系IRBLzt-T、... 相似文献
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Sovann Kin Juan L. Silva Brian S. Smith Viodelda Jackson Taejo Kim 《Journal Of Aquatic Food Product Technology》2013,22(4):400-415
The objective of this study was to determine the effects of various agglomerated phosphate blends on the quality of vacuum-tumbled catfish fillets. Catfish fillets were tumbled with a brine solution at 15% over initial, raw weight prior to tray-packing and storage at 4°C for 10 days. Fillets were evaluated for protein exudate, tumbling yield, color, pH, cooking loss, tenderness, purge loss, and shelf life. A specific blend of agglomerated sodium phosphates (AGSP) that contains mono-, tri-, and polyphosphates had significantly less protein (p < 0.05) exudate and significantly higher pH (p < 0.05) than other treatments. All phosphate treatments significantly increased (p < 0.05) tenderness and significantly decreased (p < 0.05) purge loss, but agglomerated phosphate blends significantly decreased (p < 0.05) cooking loss and yellowness. Psychrotrophic plate counts for all phosphate treatments were similar to the control at each storage time. All phosphate treatments improved the yield and quality of catfish fillets, but the use of AGSP may optimize quality attributes. 相似文献
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RT-PCR方法检测烟草环斑病毒的研究 总被引:14,自引:1,他引:14
根据烟草环斑病毒(TRSV)外壳蛋白基因非编序列设计的引物P1,P2,用感病及健康组织总RNA为模板,进行cDNA 合成和PCR试验,感病组织中扩增出了600 bp的目的片段,而健康组织中无此扩增带。摸索各项实验条件,建立了RT-PCR检测烟草环斑病毒(TRSV)的方法。 相似文献
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Effects of road transportation on metabolic and immunological responses in Holstein heifers 下载免费PDF全文
Hyeok‐Joong Kang In Kyu Lee Min‐Yu Piao Chae‐Won Kwak Min Jeong Gu Cheol Heui Yun Hyun‐Jin Kim Hyeon‐Ju Ahn Hee‐Bal Kim Gyeom‐Heon Kim Soo‐Ki Kim Jong‐Youl Ko Jong K. Ha Myunggi Baik 《Animal Science Journal》2017,88(1):140-148
This study examined the effects of road transportation on metabolic and immunological responses in dairy heifers. Twenty Holstein heifers in early pregnancy were divided into non‐transported (NT; n = 7) and transported (T; n = 13) groups. Blood was collected before transportation (BT), immediately after transportation for 100 km (T1) and 200 km (T2), and 24 h after transportation (AT). The T heifers had higher (P < 0.05) blood cortisol and non‐esterified fatty acid concentrations after T1 and T2 than did NT heifers. By contrast, the T heifers had lower (P < 0.05) serum triglyceride concentrations after T1 and T2 than had the NT heifers. The serum cortisol and triglyceride concentrations returned (P > 0.05) to the BT concentrations at 24 h AT in the T heifers. The granulocyte‐to‐lymphocyte ratio and the percentage of monocytes were higher (P < 0.05) after T2 in the T heifers than in the NT heifers, suggesting that transportation stress increased the numbers of innate immune cells. T heifers had higher (P < 0.01) plasma haptoglobin concentrations than NT heifers 24 h AT. In conclusion, transportation increased cortisol secretion and was correlated with increased metabolic responses and up‐regulation of peripheral innate immune cells in dairy heifers. 相似文献
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Steed PM Tansey MG Zalevsky J Zhukovsky EA Desjarlais JR Szymkowski DE Abbott C Carmichael D Chan C Cherry L Cheung P Chirino AJ Chung HH Doberstein SK Eivazi A Filikov AV Gao SX Hubert RS Hwang M Hyun L Kashi S Kim A Kim E Kung J Martinez SP Muchhal US Nguyen DH O'Brien C O'Keefe D Singer K Vafa O Vielmetter J Yoder SC Dahiyat BI 《Science (New York, N.Y.)》2003,301(5641):1895-1898
Tumor necrosis factor (TNF) is a key regulator of inflammatory responses and has been implicated in many pathological conditions. We used structure-based design to engineer variant TNF proteins that rapidly form heterotrimers with native TNF to give complexes that neither bind to nor stimulate signaling through TNF receptors. Thus, TNF is inactivated by sequestration. Dominant-negative TNFs represent a possible approach to anti-inflammatory biotherapeutics, and experiments in animal models show that the strategy can attenuate TNF-mediated pathology. Similar rational design could be used to engineer inhibitors of additional TNF superfamily cytokines as well as other multimeric ligands. 相似文献
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