Uptake of fluoride by two paddy (Oryza sativa L.) varieties treated with fluoride-contaminated water

The use of fluoride enriched groundwater for irrigating the paddy crops is prevalent in many parts of the world. The fluoride in the irrigated water not only affects the growth and productivity of the crops, but is also accumulated in the plant tissues. We studied the accumulation of fluoride in roots, leaves and seeds two paddy varieties (i.e. Oryza sativa L. var. IR-36 and Oryza sativa L. var. Swarno) when treated with different concentrations of fluoridated water. The translocation pattern of fluoride was also observed. The water soluble fluoride ( $ {\text{F}}_{{{\text{H}}_{ 2} {\text{O}}}} $ ) in the soil and plant parts increased substantially with increasing fluoride concentration in treated water. The Swarno variety showed a slight but consistent higher uptake of fluoride than the IR-36 variety. Fluoride uptake by the germinated seedlings was many folds higher than the uptake by mature plants. At 30 mg l^?1 fluoride exposure, the mean $ {\text{F}}_{{{\text{H}}_{ 2} {\text{O}}}} $ accumulation (mg kg^?1 dry weight) in root, leaves, and seeds of Swarno was 54.1, 51.4 and 42.3, whereas the corresponding values in IR-36 were 50.9, 48.5 and 39.2. For the same exposure, the fluoride accumulation in root and shoot of Swarno and IR-36 seedlings were 3,480, 3,463 and 3,386, 3,360 mg kg^?1, respectively. Normally, the fluoride accumulation follows the order of soil > root > shoot > grain. However, at early stage of fluoride contamination (5 mg l^?1 NaF) roots tended to hyper accumulate fluoride from the soil.     

Relationship between acidity and microbiological properties in some tea soils

The present study was conducted to investigate the effects of different forms of soil acidities on microbial biomass C, ergosterol content, microbial metabolic quotient, microbial respiration quotient, and fluorescein diacetate-hydrolyzing activity of some tea-growing soils of India. Total potential and exchangeable acidity and extractable and exchangeable aluminum were higher in Tripura followed by Jalpaiguri and Kharagpur soil. Different forms of acidity were significantly and positively correlated with each other. All the microbiological properties investigated were significantly and positively correlated with soil organic C content. The ratio of organic C with microbial parameters was significantly and negatively correlated with different forms of acidity. Principal component analysis indicated that the microbial activities were not directly affected by the extractable aluminum and total potential acidity. Although the tea soils had higher microbial biomass and activities because of higher organic matter content than other soils, the ratios of microbial parameters/organic carbon indicated that inhibition of microbial growth and activities had occurred because of acidity stress.     

Draft Genome Sequencing of <Emphasis Type="Italic">Rhizoctonia solani</Emphasis> Anastomosis Group 3 (AG3- PT) Causing Stem Canker and Black Scurf of Potato

Rhizoctonia solani is a soil-borne basidiomycete fungus with a necrotrophic lifestyle being classified into fourteen reproductively incompatible anastomosis groups (AGs). AG3-PT (a potato subgroup) is associated with quantitative and qualitative yield losses through stem canker and black scurf in potato. Here we present the first draft sequence of the R. solani [AG3-PT] strain RS-20 with a G-C content of 48.3%. It consists of 11,431 total predicted protein coding regions including 181 tRNA and 31 rRNA coding genes. The initial pBLAST revealed more than 97% hits among AG groups where as only 1.7% of genes hit with other organisms. The R. solani genome is found to be dominated with tri mer repeats. The genome-wide evolutionary studies revealed the close association of AG3-PT with AG3. The draft sequence represents a helpful resource not only for understanding the core genes involved in pathogenecity but also evolution and adaptive behaviour within the R. solani species complex.     

Competition from Cu(II), Zn(II) and Cd(II) in Pb(II) Binding to Suwannee River Fulvic Acid

This is a study of trace metal competition in the complexation of Pb(II) by well-characterized humic substances, namely Suwannee River Fulvic Acid (SRFA) in model solutions. It was found that Cu(II) seems to compete with Pb(II) for strong binding sites of SRFA when present at the same concentration as Pb(II). However, Cd(II) and Zn(II) did not seem to compete with Pb(II) for strong binding sites of SRFA. These two metals did compete with Pb(II) for the weaker binding sites of SRFA. Heterogeneity of SRFA was found to play a crucial role in metal–SRFA interactions. The environmental significance of this research for freshwater is that even at relatively low Pb(II) loadings, the metals associated with lead in minerals, e.g. Cu(II), may successfully compete with Pb(II) for the same binding sites of the naturally occurring organic complexants, with the result that some of the Pb(II) may exist as free Pb²⁺ ions, which has been reported to be one of the toxic forms of Pb in aquatic environment.     

Slow-growth conservation of potato microplants: efficacy of ancymidol for long-term storage in vitro

Ancymidol was investigated as an alternative mediumsupplement to mannitol for slow-growth conservation ofpotato microplants in vitro. Differentconcentrations of ancymidol (0, 5, 10, 15, 20, 25, 30,35 and 40 M) were tested in slow-growthmedia based on MS medium supplemented with either 30or 60 gl^-1 sucrose. The cultures were conservedunder a 16-h photoperiod at two temperature regimesi.e. 24 ± 1 ^°C and 6 ± 1 ^°C. Therewere significant interactions between ancymidol andother factors such as sucrose, temperature andgenotype for microplant survival, microshoot heightand overall microplant growth. Ancymidol did have abeneficial effect on culture viability after prolongedmaintenance in vitro. The growth-inhibitingeffect of ancymidol persisted through a 16-monthculture period. Combined effect of ancymidol, sucroseand temperature showed that optimum culture viabilityand desirable microplant growth were obtained when thecultures were grown in MS medium supplemented with 10M ancymidol plus 60 gl^-1 sucrose at6 ± 1 ^°C. Vitrification and flaccidity, whichare very frequently observed in potato microplantcultures during prolonged maintenance in vitrounder osmotic stress (mannitol), were not observedwhen the microplants were conserved in ancymidolmedia. Genetic stability of potato microplantsconserved in ancymidol media was evaluated usingrandomly amplified polymorphic DNA (RAPD)fingerprints. Ancymidol did not induce any detectablegenetic variation in genomic DNA as visualized by theabsence of either any additional RAPD fragment oralterations in RAPD fragment patterns.     

Ethion degradation and its correlation with microbial and biochemical parameters of tea soils

Ethion, a highly persistent insecticide in soil, is extensively used in tea cultivation in the tropics. The studies on the environmental impact of ethion in tea soil ecosystems are scanty. Silty loam and sandy loam soils from tea fields of Dooars (Typic Uderthents) and Hill (Typic Dystrudepts), respectively, were investigated for the degradation and effect of ethion application on soil microbial and biochemical variables under controlled laboratory conditions. Ethion degraded faster in the Hill soil than in the Dooars soil. Higher temperature (30°C) aided in faster degradation due to the increased microbial activity in the soils. Ethion application at field rate (FR) had lower half-lives (70 days at 20°C and 42.3 days at 30°C for Dooars soil; 65.4 days at 20°C and 39 days at 30°C for Hill soil) than at ten times FR (10FR; 75.2 days at 20°C and 44.2 days at 30°C for Dooars soil; 70 days at 20°C and 41.8 days at 30°C for Hill soil). Soil microbial biomass carbon, ergosterol content, fluorescein diacetate hydrolyzing and β-glucosidase activities declined in all the treatment combinations up to day 60 for both FR and 10FR doses at 20°C, irrespective of the soil types. At 30°C, the decreasing trend was observed up to day 30 for both the soils. The toxicological effect of ethion on microbiological and biochemical parameters persisted till their corresponding half-lives. The microbial metabolic quotient and microbial respiration quotient were altered, but was short-lived, indicating ethion induced disturbances. The recovery of the depressive action at 10FR ethion spiking on the studied variables was of slightly longer duration than noticed at FR application, although the depressive effect was overcoming after the respective half-lives of ethion. The microbial and biochemical soil parameters were negatively correlated with application of ethion up to day 60 of incubation.