The large-effect drought-resistance QTL qtl12.1 increases water uptake in upland rice

Drought stress is the most important abiotic factor limiting upland rice yields. Identification of quantitative trait loci (QTL) conferring improved drought resistance may facilitate breeding progress. We previously mapped a QTL with a large effect on grain yield under severe drought stress (qtl12.1) in the Vandana/Way Rarem population. In the current paper, we present results from a series of experiments investigating the physiological mechanism(s) by which qtl12.1 affects grain yield under drought conditions. We performed detailed plant water status measurements on a subset of lines having similar crop growth duration but contrasting genotypes at qtl12.1 under field (24 genotypes) and greenhouse (14 genotypes) conditions. The Way Rarem-derived allele of qtl12.1 was confirmed to improve grain yield under drought mainly through a slight improvement (7%) in plant water uptake under water-limited conditions. Such an apparently small increase in water uptake associated with this allele could explain the large effect on yield observed under field conditions. Our results suggest that this improvement of plant water uptake is likely associated with improved root architecture.     

Design and implementation of agriculture research digital photo manager

Software tools for photo collection management are proliferating, but they are generally developed for personnel photo management and have limited searching and browsing functions. We implemented the Agriculture Research Digital Photo Manager (ARDPM) prototype to enable researchers, extension personnel and other users to efficiently manage, search and browse their research photo archives. Research Digital Photo Manager provides a set of visual Boolean query interfaces for multiple ways of organizing and viewing the same photo collection. It gives users powerful search capabilities. Using thumbnail display and an easy interface, ARDPM is designed to provide users powerful searching and browsing photo capabilities.     

Processed soybean meal as an alternative protein source for yellow perch (Perca flavescens) feed

The goal of this study was to compare conventional soybean meal (SBM) with modified SBM (MSBM) after chemical and enzyme pretreatment to potentially reduce the antinutritional factors (ANF), as a fishmeal (FM) replacer at 50% or 100% in the diets of yellow perch (Perca flavescens). Half of the SBM and MSBM diets contained an enzyme cocktail (of phytase and carbohydrate‐degrading enzyme), and the other half received no enzyme supplementations. Fingerlings (297; initial weight, 11.01 ± 0.19 g) were randomly distributed over nine treatments, in triplicate, and fed these isonitrogenous diets (crude protein 410 g/kg) that included replacing FM with SBM at 50% or 100% without or with enzyme supplementations (S50, S100, S50+E or S100+E, respectively), MSMB at 50% or 100% without or with enzyme supplementations (MS50, MS100, MS50+E or MS100+E, respectively) or a control FM‐based diet. After 10 weeks, the growth performance, feeding efficiencies, proximate composition, intestinal/pyloric caeca digestive enzymes and liver metabolic/antioxidant enzymes in P. flavescens were measured. The highest (p < 0.05) growth performance and nutrient utilization parameters (protein efficiency ratio and protein productive value, PPV) were observed for the MS_50+E group, which was not statistically different to parameters for the control and MS₅₀ groups, and significantly (p < 0.05) higher than all other groups. The lowest and highest growth performance and feed conversion ratios, respectively, were observed in the S100, S100+E and MS100 groups. The highest protease activity (in both intestine and pyloric caeca) was observed for the control group, but was significantly similar to MS₅₀, MS_50+E and S_50+E groups. The lowest value was observed for 100% replacement of FM protein by SBM and MSBM fed groups. However, inclusion of exogenous enzymes in feed showed positive effects in MS_50+E (compared to MS₅₀) for PPV, lipid productive value and amylase activity in the intestine. Activity of protein metabolism enzymes (i.e., alanine transaminase and aspartate aminotransferase) in the liver was the highest in the control group, which was similar (p < 0.05) to the MS_50+E and MS₅₀ groups. Antioxidant enzymes (catalase, superoxide dismutase and glutathione peroxidase) in the liver were the lowest in the control group, which was significantly similar (p < 0.05) to the group given the feed with 50% replacement of FM protein. Complete (100%) replacement of FM protein exhibited the highest antioxidant enzyme activity. Conclusively, performance of the MS₅₀ and MS_50+E groups was similar to the FM group and better than SBM group; therefore, MSBM with high protein and low ANFs has considerable potential as an alternative to FM in aquafeed.     

Productivity status of traditional agrisilviculture system on northern and southern aspects in mid-hill situation of Garhwal Himalaya, India

The productivity of traditional agrisilviculture system (agricultural crops + trees) was investigated in the northern and southern aspects of mid-hill situation in Garhwal Himalaya, Uttarakhand, India during the 2004-2006. A total of 19 tree species were studied in both northern and southern aspects, out of which 17 tree species were selected in northern aspect and 12 tree species in southern aspect for phytosociological characteristic analysis of trees in agrisilvicultural system. The most dominant tree species are Grewia optiva, Celtis australis and Melia azedarach and successively grown under traditional agrisilviculture system. The results show that the annual productivity of all tree species was 3775 kg·ha-1·a-1 in northern aspect (site-N) and 3101 kg·ha-1·a-1 in southern aspect (site-S). G. Optiva had the highest productivity in both site-N and site-S among the tree species, followed by M. Azedarach, Quercus leucotrichophora and C. Australis. The dominant agricultural crops were Eleusine coracana in summer cereals, Phaseolus vulgaris in summer pulses-oilseeds and Triticum aestivum in the winter season in the area. The average biological productivity of agricultural crops in northern aspect was about 16% higher than that in southern aspect under traditional agrisilviculture system. The sole agricultural crop productivity (without trees) in northern aspect was also higher than that in southern aspect. An obvious difference in annual productivity of trees and agriculture crops was observed between northern aspect and southern aspect. The overall productivity in traditional agrisilviculture system (crop + tree) was 24% (in northern aspect) and 21% (in southern aspect) higher than that in sole cropping system.     

Differential diffusivity of Nodal and Lefty underlies a reaction-diffusion patterning system

Biological systems involving short-range activators and long-range inhibitors can generate complex patterns. Reaction-diffusion models postulate that differences in signaling range are caused by differential diffusivity of inhibitor and activator. Other models suggest that differential clearance underlies different signaling ranges. To test these models, we measured the biophysical properties of the Nodal/Lefty activator/inhibitor system during zebrafish embryogenesis. Analysis of Nodal and Lefty gradients revealed that Nodals have a shorter range than Lefty proteins. Pulse-labeling analysis indicated that Nodals and Leftys have similar clearance kinetics, whereas fluorescence recovery assays revealed that Leftys have a higher effective diffusion coefficient than Nodals. These results indicate that differential diffusivity is the major determinant of the differences in Nodal/Lefty range and provide biophysical support for reaction-diffusion models of activator/inhibitor-mediated patterning.     

Chemical constituents of Kigelia pinnata twigs and their GLUT4 translocation modulatory effect in skeletal muscle cells

Phytochemical investigation of the ethanolic extract of twigs of Kigelia pinnata DC. afforded one new iridoid 7-hydroxy eucommiol (1), and nine known compounds (2-10). The structure of compounds was elucidated by extensive spectroscopic methods, including 1D, 2D NMR experiments and MS analysis. All these compounds were evaluated for GLUT4 translocation modulatory effect in skeletal muscle cells. Four of the tested compounds 1, 5, 6 and 7 showed significant stimulation of GLUT4 translocation to cell surface in skeletal muscle cells without any adverse effect on cell viability. Effect of these four compounds was concentration-dependent and comparable to standard drug rosiglitazone. These findings indicate that constituents of K. pinnata may provide leads for the therapeutics for insulin resistance and diabetes.     

Seroepizootiological survey for selected viral infections in captive Asiatic lions (Panthera leo persica) from western India.

Infectious diseases have been responsible for large-scale declines in many endangered animals. Disease outbreaks in small populations have probably led to the eventual extinction of such endangered animals in the wild. The endangered Asiatic lion (Panthera leo persica) population may also face such threats. This was evident from this study on captive Asiatic lions from western India, which were sampled from December 1998 to March 1999. Fifty-six Asiatic lions, including 17 hybrid lions (Afro-Asian crosses) from six captive centers in western India, were tested for antibodies against canine distemper virus (CDV), feline parvovirus (FPV), feline immunodeficiency virus (FIV), and feline leukemia viral (FeLV) antigen. Agar gel immunodiffusion test and dot immunobinding assay were employed for CDV and FPV antibody detection. Commercial enzyme-linked immunosorbent assay kits were used for FIV antibody and FeLV antigen detection. Forty-nine of 56 lions (87.5%) were positive for CDV. All 56 (100%) lions were positive for FPV antibodies. There were no detectable levels of FIV antibodies and FeLV antigens. It was observed that CDV and FPV, two viruses known to cause high mortality in captive carnivores, were widely prevalent in these captive Asiatic lions. It is suggested that these seropositive animals will have the potential to pose a risk of infection to other seronegative animals. Hence, it is imperative to carefully consider any movement, translocation, or reintroduction of these animals to new regions. It is also recommended that these animals be required to undergo standard quarantine and disease screening protocols. The lack of exposure to pathogens, such as FIV and FeLV, would also be a risk, and, hence, identification of reservoirs and screening of in-contact animals is highly recommended. Vaccinations must be considered, using killed or other suitable viral vaccines, which have been proved to be safe, effective, and efficacious in endangered felids.     

Yield and Zinc,Copper, Manganese and Iron Concentration in Maize (Zea mays L.) Grown on Vertisol as Influenced by Zinc Application from Various Zinc Fertilizers

Zinc (Zn) deficiency in soils and field crops is widespread across the world, including India, resulting in severe reduction in yield. Hence, soil application of Zn fertilizers is recommended for ameliorating Zn deficiency in soil and for obtaining higher crop yield and better crop quality. Zinc sulfate is commonly used Zn fertilizer in India because of its solubility and less cost. However, good quality and adequate quantity of zinc sulfate is not available in the market round the year for farmers' use. Field experiments were therefore conducted during rainy season of 2010 and 2011 at research farm of Indian Institute of Soil Science, Bhopal, India to assess the influence of Zn application through zinc sulfate monohydrate (33% Zn), zinc polyphosphate (21% Zn) and Zn ethylenediaminetetraacetate (EDTA) (12% Zn) on yield and micronutrient concentration and uptake by maize (Zea mays L.). In both the years, grain and vegetative tissue (stover) yield of maize increased significantly with successive application of Zn up to 1 kg ha^?1 added through zinc sulfate monohydrate and zinc polyphosphate. Addition of 2.5 kg Zn ha^?1 did not increase yield further but resulted in highest stover Zn concentration. Zinc, copper (Cu), manganese (Mn), and iron (Fe) concentration in maize grain varied from 22.2 to 27.6, 1.6 to 2.5, 3.5 to 4.7 and 19.9 to 24.5 mg kg^?1 respectively in both the years. Maize stover had 25.9 to 36.2, 7.9 to 9.8, 36.7 to 44.9 and 174 to 212 mg kg^?1 Zn, Cu, Mn, and Fe, respectively. Zinc application did not influence Cu, Mn and Fe concentration in both grain and stover of maize. Transfer coefficients (TCs) of micronutrients varied from 0.72 to 0.95, 0.18 to 0.30, 0.08 to 0.13 and 0.10 to 0.15 for Zn, Cu, Mn, and Fe respectively. Total Zn uptake significantly increased with Zn application from 0.5 to 2.5 kg ha^?1 supplied through zinc sulfate monohydrate and zinc polyphosphate. Recovery efficiency of Zn declined with increased Zn rates.