The genetic relationship between popping expansion volume and two yield components in popcorn using unconditional and conditional QTL analysis

Popping expansion volume (PEV) is the most important quality trait in popcorn, while its germplasm is inferior to normal dent/flint corn in yield. In this study, 259 F_2:3 families, developed from the cross between a dent corn inbred Dan232 and a popcorn inbred N04, were evaluated for their PEV, grain weight per plant (GWP) and 100-grain weight (100 GW) in two environments. The genetic relationship between PEV and GWP, and 100 GW on individual gene loci were evaluated using unconditional and conditional QTL mapping methods. In total, five, one and three unconditional QTL were identified for PEV, GWP, and 100 GW, respectively. The positive alleles of all QTL for PEV were from N04, while positive alleles of all QTL for GWP and 100 GW were from Dan232. In conditional mapping, one and two QTL failed to be detected, and all four additional QTL were detected. Nevertheless, three QTL were identified, which controlled PEV independently from GWP/100 GW. They seemed to be potential candidates in popcorn breeding to increase PEV without decreasing GWP/100 GW. The results suggested that for significantly correlated traits, the conditional QTL mapping method could be used to dissect the genetic interrelationship between traits at the level of individual QTL, as well as reveal additional QTL that were undetectable by unconditional mapping.     

Upscaling as ecological information transfer: a simple framework with application to Arctic ecosystem carbon exchange

Transferring ecological information across scale often involves spatial aggregation, which alters information content and may bias estimates if the scaling process is nonlinear. Here, a potential solution, the preservation of the information content of fine-scale measurements, is highlighted using modeled net ecosystem exchange (NEE) of an Arctic tundra landscape as an example. The variance of aggregated normalized difference vegetation index (NDVI), measured from an airborne platform, decreased linearly with log(scale), resulting in a linear relationship between log(scale) and the scale-wise modeled NEE estimate. Preserving three units of information, the mean, variance and skewness of fine-scale NDVI observations, resulted in upscaled NEE estimates that deviated less than 4% from the fine-scale estimate. Preserving only the mean and variance resulted in nearly 23% NEE bias, and preserving only the mean resulted in larger error and a change in sign from CO₂ sink to source. Compressing NDVI maps by 70–75% using wavelet thresholding with the Haar and Coiflet basis functions resulted in 13% NEE bias across the study domain. Applying unique scale-dependent transfer functions between NDVI and leaf area index (LAI) decreased, but did not remove, bias in modeled flux in a smaller expanse using handheld NDVI observations. Quantifying the parameters of statistical distributions to preserve ecological information reduces bias when upscaling and makes possible spatial data assimilation to further reduce errors in estimates of ecological processes across scale.     

Combining top-down and bottom-up dynamics in land use modeling: exploring the future of abandoned farmlands in Europe with the Dyna-CLUE model

Land use change is the result of interactions between processes operating at different scales. Simulation models at regional to global scales are often incapable of including locally determined processes of land use change. This paper introduces a modeling approach that integrates demand-driven changes in land area with locally determined conversion processes. The model is illustrated with an application for European land use. Interactions between changing demands for agricultural land and vegetation processes leading to the re-growth of (semi-) natural vegetation on abandoned farmland are explicitly addressed. Succession of natural vegetation is simulated based on the spatial variation in biophysical and management related conditions, while the dynamics of the agricultural area are determined by a global multi-sector model. The results allow an exploration of the future dynamics of European land use and landscapes. The model approach is similarly suitable for other regions and processes where large scale processes interact with local dynamics.     

Changes in fox squirrel anti-predator behaviors across the urban–rural gradient

Predator stimuli created by humans in the urban environment may alter animals’ anti-predator behaviors. I hypothesized that habituation would cause anti-predator behaviors to decrease in urban settings in response to humans. Additionally, I hypothesized that populations habituated to humans would show reduced responses to other predator stimuli. I observed three populations of squirrels (urban, suburban and rural) responses to human approaches, red-tailed hawk vocalizations (Buteo jamaicensis) and coyote (Canis latrans) vocalizations. Mahalanobis distances of anti-predator behaviors in response to human approaches were consistent with the urban–rural gradient. Flight initiation distances (X ² = 26.33, df = 2, P < 0.001) and amount of time dedicated to anti-predator behavior (X ² = 10.94, df = 2, P = 0.004) in response to human approaches were also consistent with the urban–rural gradient. Supporting the habituation hypothesis, naive juvenile squirrels increased flight initiation distances (X ² = 35.89, df = 1, P < 0.001) and time dedicated to anti-predator behaviors (X ² = 9.46, df = 1, P = 0.002) relative to adult squirrels in the same urban environment. Time dedicated to anti-predator behaviors differed among all three sites in response to both coyote (X ² = 9.83, df = 2, P = 0.007) and hawk (X ² = 6.50, df = 2, P = 0.035) vocalizations. Responses to both vocalizations on rural sites (coyote = 45%, hawk = 55%) greater than twice that found on the urban sites (coyote = 11%, hawk = 20%). This is possibly the first case of a transfer of habituation demonstrated under field conditions.     

Surface velocity coefficients for application of the float method in rectangular and compound open channels

A three-dimensional mathematical hydraulic model was applied to calculate velocity profiles and discharge under steady, uniform flow conditions in rectangular and compound open-channel cross sections. The velocity profiles were used to calculate surface velocity coefficients for use with the float method for discharge estimation in the field. Surface velocity coefficients were calculated at increments of one-eighth of the base width from the vertical walls to the center of the cross section, and submergence of the float object from 0 to 30 cm, with a 5-cm depth increment. Model results were summarized to show the relationship between surface velocity coefficient and channel characteristics compared to values published by the US Bureau of Reclamation (USBR). For rectangular cross sections, the coefficients from the model are generally higher than the published USBR values. But the coefficients from the model and USBR are in very close agreement for the tested compound cross sections. The published coefficients by the USBR are a function of only average water depth. However, the model results show that the coefficient is also related to channel size, cross-sectional aspect ratio, surface roughness height, float submergence and lateral location of the float object. These factors should be included in the determination of the surface velocity coefficient to improve the discharge estimations from the application of the float method.     

Response of alfalfa (<Emphasis Type="Italic">Medicago sativa</Emphasis> L.) to diurnal and nocturnal saline sprinkler irrigations. II: shoot ion content and yield relationships

When using saline waters, sprinkling irrigation at night is a recommended practice to reduce evaporation, salt absorption by the wetted leaves and its negative effects on crops. We measured shoot ion concentrations (Cl⁻, Na⁺ and K⁺) and total dry matter (TDM) in alfalfa subject to diurnal and nocturnal saline sprinkler irrigations and established potential relationships among them. The work was carried out along the 2004–2006 growing seasons using EC waters from 0.5 to 5.6 dS m⁻¹. Saline sprinkling irrigations linearly increased shoot Cl⁻ and Na⁺ and decreased shoot K⁺. Even though daytime evaporation was much higher than nigh-time, shoot ion accumulation and TDM were similar in the diurnal and nocturnal irrigations. The salinity tolerance of alfalfa decreased in year 2006 due to increases in shoot Cl⁻ and, particularly, shoot Na⁺. The lower threshold for shoot Na⁺ (276 meq kg⁻¹) than for shoot Cl⁻ (726 meq kg⁻¹) shows that alfalfa is more sensitive to Na⁺ than to Cl⁻, and that Na⁺ accumulation is the preponderant cause of alfalfa yield decline after 3 years of sprinkling with saline waters.     

Bahiagrass crop coefficients from eddy correlation measurements in central Florida

Bahiagrass (Paspalum notatum) is a warm-season grass used primarily in pastures and along highways and other low maintenance public areas in Florida. It is also used in landscapes to some extent because of its drought tolerance. Bahiagrass can survive under a range of moisture conditions from no irrigation to very wet conditions. Its well-watered consumptive use has not been reported previously. In this study, bahiagrass crop coefficients (K _c) for an irrigated pasture were determined for July 2003 through December 2006 in central Florida. The eddy correlation method was used to estimate crop evapotranspiration (ET_c) rates. The standardized reference evapotranspiration (ET_o) equation (ASCE-EWRI standardization of reference evapotranspiration task committee report, 2005) was applied to calculate ET_o values using on site weather data. Daily K _c values were estimated from the ratio of the measured ET_c and the calculated ET_o. The recommended K _c values for bahiagrass are 0.35 for January–February, 0.55 for March, 0.80 for April, 0.90 for May, 0.75 for June, 0.70 for July–August, 0.75 for September, 0.70 for October, 0.60 for November, and 0.45 for December in central Florida. The highest K _c value of 0.9 in May corresponded with maximum vapor pressure deficit conditions as well as cloud free conditions and the highest incoming solar radiation as compared to the rest of the year. During the summer (June to August), frequent precipitation events increased the cloud cover and reduced grass water use. The K _c annual trend was similar to estimated K _c values from another well-watered warm-season grass study in Florida.     

Effects of Dietary Vitamin C on Blood Chemistry and Nonspecific Immune Response of Juvenile Red Sea Bream,Pagrus major

A trial was conducted to determine the effect of ascorbyl‐2‐monophosphate Na/Ca (AMP‐Na/Ca) on blood chemistry and nonspecific immune response of red sea bream juveniles. Test diets with three levels of AsA (free, 107, and 325 mg/kg diet) were fed to juvenile red sea bream (36.0 ± 1.3 g) two times a day for 3 wk. There were no significant differences in hematocrit, glucose, and blood urea nitrogen. Total cholesterol and triglyceride in plasma of fish fed AsA‐free diet was significantly (P < 0.05) higher than that of fish fed two other diets. There were no significant differences in serum albumin, total bilirubin, and total serum protein. Glutamyl oxaloacetic transaminase in serum of fish fed diets containing 107 and 325 mg of AsA were significantly (P < 0.05) lower than that of fish fed AsA‐free diet. Serum lysozyme activity (LA) of fish fed diets containing 107 and 325 mg of AsA were significantly (P < 0.05) higher than that of fish fed AsA‐free diet. There was no significant difference in mucus LA. The results mentioned above demonstrated that AMP‐Na/Ca is a bioavailable AsA source for red sea bream juveniles. Supplement of more than 107 mg AsA/kg in diets improved blood chemistry and nonspecific immune function of red sea bream juveniles.     

Bioaccumulation of cadmium and its biochemical effect on selected tissues of the catfish (<Emphasis Type="Italic">Clarias gariepinus</Emphasis>)

The present study examines the pattern of accumulation of cadmium (Cd) and its biochemical effects on selected tissues of a variety of African catfish (Clarias gariepinus), after exposure to various doses of Cd. The results obtained indicate that at the end of 21 days of exposure, the total tissue organ cadmium concentration followed the pattern kidney > gill > liver > muscle for each of the exposure concentrations. The levels of Cd in these organs were higher than those in ambient water. Moreover, while the rate of uptake of Cd increased with time in the kidney, liver and muscle, it decreased in the gill. Superoxide dismutase (SOD) was significantly elevated only in the kidney of catfish treated with 0.2 and 0.4 ppm of Cd for 7 days compared with the control. Conversely, gill SOD was significantly decreased in the same concentrations of Cd-treated catfish relative to the control. Statistically similar levels of SOD were observed in the liver, brain and muscle with all the treatments after the same duration of treatment. In the fish exposed for 21 days, SOD activity was significantly decreased in the kidney with a corresponding increase in lipid peroxidation (LPO), but it manifested only with the 0.2- and 0.4-ppm Cd treatment relative to the control. In the liver, however, Cd exposure significantly increased SOD in the 0.2- and 0.4-ppm treatments of the same duration. In conclusion, the present study indicates that the accumulation of Cd and its effect on SOD and LPO in C. gariepinus is dependent on concentration, tissue and time