Influence of the allelic variants encoded at the Gli-B1 locus, responsible for a major allergen of wheat, on IgE reactivity for patients suffering from food allergy to wheat

Wheat presents an important genetic diversity that could be useful to look for cultivars with reduced allergencity. omega5-Gliadins have been described as major allergens for wheat allergic patients suffering from wheat-dependent exercise-induced anaphylaxis (WDEIA) and some cases of chronic urticaria (U). Our objective was to study the influence of genetic variability at the Gli-B1 locus encoding for omega5-gliadins on the reactivity of IgE antibodies from these patients. We selected cultivars expressing 13 alleles at Gli-B1 including a wheat/rye translocation and studied the reactivity to gliadins of a rabbit antiserum specific for omega5-gliadins and of IgE from 10 patients. The antiserum and IgE from nine patients with WDEIA and U strongly detected omega5-gliadins expressed by most of the Gli-B1 alleles but showed no or faint responses to the gliadins and secalins extracted from the translocated wheat. The selection of genotypes lacking the Gli-B1 locus may reduce wheat allergenicity.     

ALS-based estimation of plot volume and site index in a eucalyptus plantation with a nonlinear mixed-effect model that accounts for the clone effect

Introduction  

Most airborne laser scanning (ALS) studies have been carried out in semi-natural forests, but some research has also been carried out in plantations. Results indicate that methods similar to those which are used in semi-natural forest are also usable in plantation forestry. The study was conducted in a pulpwood plantation growing Eucalyptus urograndis in Bahia State, Brazil.     

Characterization of a common susceptibility locus for asthma-related traits

Susceptibility to asthma depends on variation at an unknown number of genetic loci. To identify susceptibility genes on chromosome 7p, we adopted a hierarchical genotyping design, leading to the identification of a 133-kilobase risk-conferring segment containing two genes. One of these coded for an orphan G protein-coupled receptor named GPRA (G protein-coupled receptor for asthma susceptibility), which showed distinct distribution of protein isoforms between bronchial biopsies from healthy and asthmatic individuals. In three cohorts from Finland and Canada, single nucleotide polymorphism-tagged haplotypes associated with high serum immunoglobulin E or asthma. The murine ortholog of GPRA was up-regulated in a mouse model of ovalbumin-induced inflammation. Together, these data implicate GPRA in the pathogenesis of atopy and asthma.     

Inventory of aspen trees in spruce dominated stands in conserva-tion area

Background: The occurrence of aspen trees increases the conservation value of mature conifer dominated forests.Aspens typically occur as scattered individuals among major tree species, and therefore the inventory of aspens is challenging.Methods: We characterized aspen populations in a boreal nature reserve using diameter distribution, spatial pattern, and forest attributes: volume, number of aspens, number of large aspen stems and basal area median diameter. The data were collected from three separate forest stands in Koli National Park, eastern Finland. At each site, we measured breast height diameter and coordinates of each aspen. The comparison of inventory methods of aspens within the three stands was based on simulations with mapped field data. We mimicked stand level inventory by locating varying numbers of fixed area circular plots both systematically and randomly within the stands. Additionally, we also tested if the use of airborne laser scanning(ALS) data as auxiliary information would improve the accuracy of the stand level inventory by applying the probability proportional to size sampling to assist the selection of field plot locations.Results: The results showed that aspens were always clustered, and the diameter distributions indicated different stand structures in the three investigated forest stands. The reliability of the volume and number of large aspen trees varied from relative root mean square error figures above 50% with fewer sample plots(5–10) to values of25%–50% with 10 or more sample plots. Stand level inventory estimates were also able to detect spatial pattern and the shape of the diameter distribution. In addition, ALS-based auxiliary information could be useful in guiding the inventories, but caution should be used when applying the ALS-supported inventory technique.Conclusions: This study characterized European aspen populations for the purposes of monitoring and management of boreal conservation areas. Our results suggest that if the number of sample plots is adequate,i.e. 10 or more stand level inventory will provide accurate enough forest attributes estimates in conservation areas(minimum accuracy requirement of RMSE% is 20%–50%). Even for the more ecologically valuable attributes, such as diameter distribution, spatial pattern and large aspens, the estimates are acceptable for conservation purposes.     

Sensitivity of barley varieties to weather in Finland

Global climate change is predicted to shift seasonal temperature and precipitation patterns. An increasing frequency of extreme weather events such as heat waves and prolonged droughts is predicted, but there are high levels of uncertainty about the nature of local changes. Crop adaptation will be important in reducing potential damage to agriculture. Crop diversity may enhance resilience to climate variability and changes that are difficult to predict. Therefore, there has to be sufficient diversity within the set of available cultivars in response to weather parameters critical for yield formation. To determine the scale of such 'weather response diversity' within barley (Hordeum vulgare L.), an important crop in northern conditions, the yield responses of a wide range of modern and historical varieties were analysed according to a well-defined set of critical agro-meteorological variables. The Finnish long-term dataset of MTT Official Variety Trials was used together with historical weather records of the Finnish Meteorological Institute. The foci of the analysis were firstly to describe the general response of barley to different weather conditions and secondly to reveal the diversity among varieties in the sensitivity to each weather variable. It was established that barley yields were frequently reduced by drought or excessive rain early in the season, by high temperatures at around heading, and by accelerated temperature sum accumulation rates during periods 2 weeks before heading and between heading and yellow ripeness. Low temperatures early in the season increased yields, but frost during the first 4 weeks after sowing had no effect. After canopy establishment, higher precipitation on average resulted in higher yields. In a cultivar-specific analysis, it was found that there were differences in responses to all but three of the studied climatic variables: waterlogging and drought early in the season and temperature sum accumulation rate before heading. The results suggest that low temperatures early in the season, delayed sowing, rain 3-7 weeks after sowing, a temperature change 3-4 weeks after sowing, a high temperature sum accumulation rate from heading to yellow ripeness and high temperatures (?25°C) at around heading could mostly be addressed by exploiting the traits found in the range of varieties included in the present study. However, new technology and novel genetic material are needed to enable crops to withstand periods of excessive rain or drought early in the season and to enhance performance under increased temperature sum accumulation rates prior to heading.     

Climate change mitigation through increased wood use in the European construction sector—towards an integrated modelling framework

Using wood as a building material affects the carbon balance through several mechanisms. This paper describes a modelling approach that integrates a wood product substitution model, a global partial equilibrium model, a regional forest model and a stand-level model. Three different scenarios were compared with a business-as-usual scenario over a 23-year period (2008?C2030). Two scenarios assumed an additional one million apartment flats per year will be built of wood instead of non-wood materials by 2030. These scenarios had little effect on markets and forest management and reduced annual carbon emissions by 0.2?C0.5% of the total 1990 European GHG emissions. However, the scenarios are associated with high specific CO₂ emission reductions per unit of wood used. The third scenario, an extreme assumption that all European countries will consume 1-m³ sawn wood per capita by 2030, had large effects on carbon emission, volumes and trade flows. The price changes of this scenario, however, also affected forest management in ways that greatly deviated from the partial equilibrium model projections. Our results suggest that increased wood construction will have a minor impact on forest management and forest carbon stocks. To analyse larger perturbations on the demand side, a market equilibrium model seems crucial. However, for that analytical system to work properly, the market and forest regional models must be better synchronized than here, in particular regarding assumptions on timber supply behaviour. Also, bioenergy as a commodity in market and forest models needs to be considered to study new market developments; those modules are currently missing.     

Parr dispersal between streams via a marine environment: A novel mechanism behind straying for anadromous brown trout?

Otolith Sr:Ca profiles demonstrated that juvenile anadromous brown trout (ABT) Salmo trutta may descend to the brackish waters of the Baltic Sea from their natal streams as parr or fry and then migrate into non‐natal streams before transforming into smolt. To our knowledge, no such published documentation exists for ABT. The ecological significance of this life‐history strategy is presently not clear. However, stream shifting through the marine environment should to be considered with regard to stock management and the assessment and restoration of salmonid populations and their potential habitats.     

Random sample estimates of tree mean for fruit size and colour in apple

Data obtained in 2005 from thinning experiments with ‘Ariane’ and ‘Pitchounette’ apples (Malus × domestica L. Borkh.) were used to estimate tree mean fruit diameter (MD), weight (MW) and proportion of red overcolour (MC) using random samples. Twenty fruit per tree were taken from the boxes containing the fruit harvested at each picking. To avoid taking only fruit in the upper layers of the boxes, fruit from each tree were spread out on a table beforehand. The estimated values were compared with the true MD, MW or MC calculated from each picking and from the entire crop. Statistical techniques were used to assess agreement between the values obtained with estimation methods and the true values. Estimates obtained from a sample averaging ∼15–20% of total crop may range from 2 to 3% of the true mean diameter, and from 6.0 to 8.5% of the true mean weight. Estimates for MC obtained from the same samples may range from 10 to 25% of the true mean overcolour. The error margin associated with estimating fruit diameter and weight from the sampling method employed in this study seems to be small enough to consider it reasonably adequate to detect treatment differences that would be considered biologically or economically significant. Blind sampling and colour determination through image analysis are suggested as a means to obtain unbiased and objective data for fruit colour determinations.     

Effects of outdoor winter housing and feeding level on performance and blood metabolites of suckler cows fed whole-crop barley silage

The experiment studied the effects of long-term cold climatic housing conditions at a latitude of 62°N on pregnant Hereford cows and their progeny. Thirty-five cows in their third parity were overwintered in outdoor facilities with either a rain-shelter or a three-wall shelter, or in an uninsulated barn. Whole-crop barley silage was offered to the cows either ad libitum or restricted supplemented with oats. The dry matter intake on the restricted diet was 75% of that on the ad libitum diet. The cow live weight (LW) averaged 670 kg at the onset of the experiment. During winter the cows outdoors on the restricted diet maintained their LW while those on the ad libitum diet gained LW (P < 0.05, − 3 vs. 41 kg). On pasture, the LW gain (LWG) was 61 and 32 kg (P < 0.05) for the cows overwintered outdoors on the restricted and on the ad libitum diets, respectively. The initial body condition score (BCS, Scale: 0–5) of the cows averaged 2.90. During winter the cows outdoors on the restricted diet decreased and those on the ad libitum diet increased the BCS (P < 0.01, − 0.14 vs. 0.21). On pasture, the cows overwintered outdoors on the restricted diet increased the BCS more than those overwintered on the ad libitum diet (P < 0.05, 0.31 vs. 0.08). No signs of extraordinary stress, massive consumption of energy stores, frequent muscle injuries or severe inflammations occurred in any of the groups according to blood analyses of cows, e.g. cortisol, long-chain fatty acids, aspartate aminotransferase, creatine kinase and white blood cell count. The calving period was from 11 March to 21 April. Only one indoor calving was classified as difficult due to faulty disposition leading to the loss of the calf. All outdoor calvings were easy. The LWG of the indoor calves of cows on the ad libitum diet was poorer (P < 0.05) pre the grazing period than that of the outdoor calves of cows on the ad libitum diet. On pasture and during the entire experiment the LWG was similar for all calves, averaging 1335 and 1251 g/d, respectively. The breeding season was 82 days. Thirty cows out of 33 were observed to be pregnant after the mating period. All the facilities offered adequate shelter for the mature, pregnant suckler cows. The restricted offering of whole-crop barley silage provided, on average, 101 MJ metabolizable energy/d and gave enough energy for the cows.