Laboratory and field testing of a dose calculation model for neutralization of Adirondack acidic lakes

A deterministic lake dose calculation model has been applied to estimate the quantity of Ca carbonate-based material needed to achieve a desired initial water chemistry in a whole lake treatment of two Adirondack acid lakes. The study lakes were treated with calcite during May 30–31, 1985. The model accurately simulated laboratory column water chemistry profiles (spatially and temporally) and dissolution efficiencies; however, the model predicted conservative efficiencies for the study lakes. Time-series water chemistry profiles of the lakes suggest that epilimnetic mixing extended suspension time of fine calcite particles, and that atmospheric carbon dioxide intrusion rate was greater than expected. The combination of these factors enhanced dissolution efficiency.     

Relationships between Soil Parameters and the Growth of Wheat Plants on an Acid Soil in Rwanda

Three wheat categories with different biomass production were studied on tropical Inceptisols in Rwanda. Growth parameters such as number of tillers per square meter, average plant height, and shoot and root biomass were determined, and elemental concentrations of roots and leaves measured. In order to identify reasons for inhibited wheat growth soil parameters such as pH, exchangeable cations, C_org and N_tot were determined. As aluminum toxicity was suspected on the acid soils, aluminum fractionation was carried out in water extracts of the soil samples using 8-hydroxyquinoline. Growth parameters correlated well with exchangeable aluminum and with soil pH. These findings, along with root morphology, indicated aluminum toxicity at the low productivity plots. Aluminum fractionation results strengthened this hypothesis, but did not give much additional information. The reasons for this are discussed. Simultaneously, the elemental concentrations of the leaves suggested Ca, Mg and P deficiencies.     

Vegetative compatibility groups in <Emphasis Type="Italic">Verticillium dahliae</Emphasis> isolates from olive in western Turkey

Verticillium wilt, caused by Verticillium dahliae, is the most serious disease in olive cultivation areas in western Turkey. Two hundred and eight isolates of V. dahliae from olive (Olea europea var. sativa) trees were taken for vegetative compatibility analysis using nitrate non-utilizing (nit) mutants. One isolate did not produce a nit mutant. Nit mutants of 207 isolates were tested against tester strains of internationally known vegetative compatibility groups (VCGs) 1A, 2A, 2B, 3, 4A and 4B, and also paired in many combinations among themselves. One hundred and eighty nine of the isolates (90.9%) were strongly compatible with T9, the tester strain of VCG1A, and thus were assigned to VCG1A. Eight isolates were assigned to VCG2A and four isolates to VCG4B. One isolate was heterokaryon self-incompatible (HSI) and five isolates could not be grouped to any of the VCGs tested. Pathogenicity assays were conducted on a susceptible olive cultivar (O. europea cv. Manzanilla) and a susceptible local cotton cultivar (Gossypium hirsutum cv. Çukurova 1518). Both cotton and olive inoculated with all VCG1A isolates showed defoliating symptoms in greenhouse tests. This is the first report on VCGs in V. dahliae from olive trees in Turkey which demonstrates that VCG1A of the cotton-defoliating type is the most commonly detected form from olive plants in the western part of Turkey.     

Occurrence of non-sorbitol fermenting, verocytotoxin-lacking Escherichia coli O157 on cattle farms

Escherichia coli O157 is often associated with hemorrhagic colitis and the hemolytic uremic syndrome (HUS). The verocytotoxins are considered to be the major virulence determinants. However, vt-negative E. coli O157 were recently isolated from patients with HUS. Several transmission routes to humans are described, but cattle feces are the primary source from which both the food supply and the environment become contaminated with E. coli O157.In a prevalence study performed on dairy, beef, mixed dairy/beef and veal farms in the summer of 2007, vt-negative isolates were detected on 11.8% (8/68) of the positive farms. From these eight farms, a total of 43 sorbitol-negative E. coli O157:H7 were collected. On five farms, only strains negative for the vt genes were present whereas both vt-negative and vt-positive strains could be detected on three other farms. Further characterization revealed that all isolates carried the eaeA and hlyA genes. Pulsed-field gel electrophoresis (PFGE) of all isolates resulted in nine different PFGE types and within the vt-negative strains, four different genotypes were identified, indicating that certain genetic clones are widespread over the cattle population.     

Organic matter returns to soils must be higher under organic compared to conventional farming

The aim of this paper is to discuss the demand of fresh organic matter (FOM) supply to maintain soil organic matter (SOM) levels and productivity of arable soils under organic management. The basic question is whether the different frame conditions in organic vs. conventional farming result in a different and system‐specific FOM demand. If this is the case, it would follow that the farming system has to be considered in the calculation of SOM balances. SOM balances are the most common decision support tools in organic matter management. A conversion to organic farming in practice usually leads to an increase of SOM levels as well as soil microbial activity over time. The system‐specific driver of this effect is the indispensable extension of the share of (perennial) legumes in crop rotations at the expense of non‐legumes such as cereals, row crops, and maize. Extended legume cropping is essential for N supply in crop rotations as the import of N fertilizer in total is limited by organic farming regulations and mineral N fertilizer may not be used at all. Based on this characteristic of organic management, we argue that the demand of FOM supply to soils must be higher than in conventional crop production. The most relevant factors are (1) the non‐existence of mineral N fertilizer as an external N source that supports the maintenance of SOM by decreasing the demand for SOM‐N, (2) benefits of increasing SOM stocks and turnover for soil productivity under organic management, and, (3) increased mass‐losses of FOM and easily degradable SOM compartments due to higher microbial activity in soils. These effects have to be quantified and must be considered in SOM balances in order to avoid misleading assessments and erroneous decisions.     

Identification and characterization of pathotypes in <Emphasis Type="Italic">Puccinia horiana</Emphasis>, a rust pathogen of <Emphasis Type="Italic">Chrysanthemum</Emphasis> x <Emphasis Type="Italic">morifolium</Emphasis>

Puccinia horiana is the causal agent of chrysanthemum white rust or Japanese rust. This microcyclic autoecious rust has a quarantine status and can cause major damage in the commercial production of Chrysanthemum x morifolium. Given the international and often trans-continental production of planting material and cut flowers of chrysanthemum and the decreasing availability of registered fungicides in specific regions, breeding for resistance against P. horiana will gain importance and will need to involve the appropriate resistance genes for the pathotypes that may be present. As pathotypes have not been well characterized in this system, the main objective was to build an international collection of isolates and screen these on a large collection of cultivars to identify different pathotypes. Using a robust and high throughput bioassay, we tested 36 selected cultivars with 22 individual single-pustule isolates of P. horiana. The isolates originated from three different continents over 4 different collection years and included some isolates from cultivars previously reported as resistant. In most cases the bioassays resulted in a clear scoring of interaction phenotypes as susceptible or resistant, while in several cases consistent intermediate phenotypes were found, often on specific cultivars. Twenty-four of the cultivars gave a differential interaction phenotype profile. All isolates produced a unique profile, infecting a minimum of 4 and a maximum of 19 differential cultivars. Based on the Person analysis of these profiles, this pathosystem contains at least seven resistance genes (and seven avirulence genes), demonstrating the highly complex race structure in this pathosystem.     

Growth Response of Various Perennial Grasses to Increasing Salinity

ABSTRACT

Although the effect of salinity on plant growth has been the focus of a substantive research effort, much of this research has failed adequately to separate the various growth-limiting aspects of salinity; thus, the results are confounded by multiple factors. Eight perennial grass species were grown in a sand-culture system dominated by sodium chloride (NaCl) [electrical conductivities (ECs) between 1.4 and 38 dS m^?1], with sufficient calcium (Ca) added to each treatment to ensure that Na-induced Ca deficiency did not reduce growth. Of the eight perennial grass species examined, Chloris gayana cv. ‘Pioneer’ (Rhodes grass) was the most salt-tolerant species, while Chrysopogon zizanioides cv. ‘Monto’ (vetiver) was of only moderate tolerance. However, observed salinity tolerances tended to be lower than those expected from published values based on the threshold-salinity (bent-stick) model. This discrepancy may be due in part to differences in the evapotranspirational demand between studies; i.e., an increase in demand accelerates the accumulation of sodium (Na) in the shoots and hence decreases apparent salinity tolerance. It was also observed that the use of a non-saline growth period (to allow seed germination and establishment) results in the overestimation of vegetative salinity tolerance if not taken into consideration. This situation is particularly true for species of low salt tolerance, due to their comparatively rapid growth in the non-saline medium compared with growth at full salinity.     

Aerial photographs reveal late-20th-century dynamic ice loss in northwestern Greenland

Global warming is predicted to have a profound impact on the Greenland Ice Sheet and its contribution to global sea-level rise. Recent mass loss in the northwest of Greenland has been substantial. Using aerial photographs, we produced digital elevation models and extended the time record of recent observed marginal dynamic thinning back to the mid-1980s. We reveal two independent dynamic ice loss events on the northwestern Greenland Ice Sheet margin: from 1985 to 1993 and 2005 to 2010, which were separated by limited mass changes. Our results suggest that the ice mass changes in this sector were primarily caused by short-lived dynamic ice loss events rather than changes in the surface mass balance. This finding challenges predictions about the future response of the Greenland Ice Sheet to increasing global temperatures.     

The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes

Wood is a major pool of organic carbon that is highly resistant to decay, owing largely to the presence of lignin. The only organisms capable of substantial lignin decay are white rot fungi in the Agaricomycetes, which also contains non-lignin-degrading brown rot and ectomycorrhizal species. Comparative analyses of 31 fungal genomes (12 generated for this study) suggest that lignin-degrading peroxidases expanded in the lineage leading to the ancestor of the Agaricomycetes, which is reconstructed as a white rot species, and then contracted in parallel lineages leading to brown rot and mycorrhizal species. Molecular clock analyses suggest that the origin of lignin degradation might have coincided with the sharp decrease in the rate of organic carbon burial around the end of the Carboniferous period.