Detection of the lunasin peptide in oats (Avena sativa L)

We report the first discovery of lunasin in oats (Avena sativa L). Lunasin is a novel cancer preventive, anti-inflammatory and cholesterol-reducing peptide originally isolated from soy and later found in cereals (barley, rye, wheat, triticale). Lunasin was detected in oats using LC–MS/MS analysis. The chromatograms and mass spectra of lunasin isolated from five oat genotypes were compared with those of the synthetic lunasin peptide. We measured the lunasin content in harvests of two years and found that all tested oat genotypes contained the lunasin peptide. However, we observed genotype-related fluctuations in the lunasin content. Notably, the middle early oat variety ‘Ivory’ contained the highest and the most stable lunasin level at 0.197 ± 0.01 mg per g of grain in year 2010 and 0.195 ± 0.009 mg per g of grain in 2011. We also characterized the selected oat genotypes by measuring the contents of protein, β-glucans, fat, starch and moisture in the grains. However, we did not find correlation between lunasin and protein, and β-glucan content. Lunasin isolated from oat showed similar to the synthetic lunasin antioxidant effects. The detection of lunasin complements a list of bioactive compounds present in oats and strengthens recommendations to use oat products.     

Spatial differences in occurrence of paratuberculosis in Danish dairy herds and in control programme participation

Paratuberculosis is a chronic infection of economic importance to the cattle industry and a voluntary control programme is offered to Danish dairy farmers. Our objective was to evaluate spatial differences in both control programme participation and paratuberculosis prevalence in Denmark. The study included 4414 dairy herds: 1249 were participating in the control programme, and 1503 were tested for antibodies to Mycobacterium avium subsp. paratuberculosis (MAP). Spatial differences were evaluated by kernel smoothing, kriging, and cluster analysis. Participation was lowest among herds on the island Zealand (≤23%). The risk of a herd being infected with MAP was found to be high on most of Zealand, but the uncertainty of this result was large due to a limited number of tested herds. In the rest of the country, the south western part of the peninsula Jutland had the highest risk of MAP (≥91%). The risk of MAP was also high (86-91%) in the northern part of both Jutland and Funen. The predicted apparent within-herd prevalence was highest (5-8.5%) in some local areas across Jutland, in the north western part of the island Funen, and in the south and western part of Zealand. Scan statistics located the primary cluster of herds with high apparent within-herd prevalence in the western part of Funen. Furthermore, a number of significant clusters were found in Jutland and a single significant cluster in Zealand. Consistency was found between kriging and scan statistics results with respect to location of areas with high apparent within-herd prevalence of MAP. Potential explanations for differences in participation include herd size and local herd health advisers, whereas for example soil characteristics might influence prevalence. Further studies are needed to evaluate these and other risk factors.     

Developmental regulation of the activation of translation initiation factors of skeletal muscle in response to feeding in horses

Objective-To determine whether feeding-induced activation of translation initiation factors, specifically protein kinase B, ribosomal protein S6 kinase (S6K1), ribosomal protein S6 (rpS6), and eukaryotic initiation factor 4E binding protein 1, in horses is affected by age. Animals-6 yearlings, six 2-year-old horses, and 6 mature horses. Procedures-After an 18-hour period of feed withholding, horses consumed a high-protein meal (2 g/kg) at time 0 and 30 minutes (postprandial state) or continued to have feed withheld (postabsorptive state). Blood samples were collected for the duration of the experimental procedures and used to determine plasma concentrations of glucose, insulin, and amino acids. At 90 minutes, biopsy specimens were collected from a gluteal muscle and used to measure phosphorylation of translation initiation factors. Results-Plasma glucose, insulin, and amino acid concentrations were elevated for the postprandial state, compared with results for the postabsorptive state, regardless of age. Phosphorylation of protein kinase B, S6K1, rpS6, and eukaryotic initation factor 4E binding protein 1 was increased for the postprandial state. There was an effect of age with increased phosphorylation of S6K1 at Thr(389) and rpS6 at Ser(235/236) in the yearlings and mature horses, compared with results for the 2-year-old horses. Conclusions and Clinical Relevance-Food consumption resulted in an increase in the activation of translation initiation factors, with the highest degree of responsiveness in the yearlings. This indicated that increased muscle accretion seen during growth could be a result of increased rates of muscle protein synthesis in response to a meal stimulus.     

Can field populations of the enchytraeid,Cognettia sphagnetorum,adapt to increased drought stress?

The ability to evolve increased drought tolerance in response to climate change was investigated in the enchytraeid, Cognettia sphagnetorum. Populations exposed to reduced precipitation or increased night time temperature for more than six years were collected in mixed Calluna/grass heathland at the Mols Laboratory, Denmark. The level of prolonged drought and increased temperature corresponded to a predicted climate change scenario and has been applied since 1999. In autumn 2005, enchytraeids were sampled in 3 cm intervals down to 9 cm depth and total number, biomass, diversity and soil organic matter were determined. The drought treatment resulted in a significant reduction of the density and biomass of enchytraeids, as well as changes in the species composition. In total, five different genera were found at the site in all three treatments (control, temperature and drought). C. sphagnetorum was the dominant species, especially in the upper 0–3 cm, and was clearly affected by the drought treatment. C. sphagnetorum from all plots were cultured in the laboratory to rear second or third generation adults. Results showed that populations of drought treated plots had not developed an increased drought resistance compared to populations of control or warming plots even after several years of a putative severe selection. Lack of adaptive potential in C. sphagnetorum suggests that more frequent periods with drought in the future will have a very strong negative influence on enchytraeid density, biomass and diversity.     

Restoration of bracken-invaded Calluna vulgaris heathlands: Effects on vegetation dynamics and non-target species

The coastal heathlands of north-western Europe are endangered habitats of great conservation value. Invasion by bracken Pteridium aquilinum is a major challenge for conservation and restoration of these heathlands, including the under-studied northern regions. Today, the herbicide asulam is the most widely applied bracken control measure, but increasing focus on organic farming and nature conservation calls for alternative, preferably mechanical, approaches. In a 7-year replicated field experiment in western Norway, we investigated efficiencies of the four bracken control measures asulam, Gratil, annual cutting and biannual cutting, in restoring the characteristic heathland vegetation structure and species composition. We specifically tested herbicide effects on diversity and composition of non-target species. Effects of treatments over time were evaluated by repeated measures ANOVA, and for multivariate data, Principal Response Curves. Our results show that UK based control methods are largely applicable to bracken at its northern limit in the European heathland habitat. Asulam resulted in the fastest reduction in cover but cutting proved equally efficient long-term. Community compositions progressed towards desired heathland vegetation, but successional trajectories differed. Asulam had unintended effects on a number of heathland species not predictable by species characteristics or functional groups. Gratil failed to have any long-term effects. In summary, cutting is as efficient as herbicide application in reducing bracken, and more so in restoring northern heathland vegetation over time.     

Is alternate wetting and drying irrigation technique enough to reduce methane emission from a tropical rice paddy?

Combination of a pre-season wet soil condition and rice straw incorporation just before transplanting, which is typical for a tropical rice double cropping, can induce a flash of methane (CH₄) emission shortly after the transplanting. The conventional practice of alternate wetting and drying (AWD) irrigation technique that typically starts at 21 days after transplanting (DAT) can hardly reduce this emission because the soil become methanogenic before the onset of AWD treatment. Field experiments were conducted in Central Luzon, Philippines, during the 2014–2017 dry rice seasons to examine the effects of the timing of rice straw/stubble incorporation on the efficacy of AWD in reducing the CH₄ emission. Two treatments of the timing of stubble incorporation were stubbles incorporated during the start of wet land preparation (S1) and stubbles incorporated during the dry fallow tillage (S2). For the water management, we compared two treatments: continuous flooding (CF) and AWD with – 15 cm threshold for irrigation. The AWD under S2 was implemented earlier at 10 DAT. We observed a significant interaction (p < 0.01) between effects of AWD and straw management on CH₄ emissions; the seasonal total CH₄ emission was reduced by AWD compared with CF by 73% under S2, while the reduction was <20% under S1. The AWD significantly (p < 0.05) increased the nitrous oxide (N₂O) emissions by 47 and 48% relative to CF under S1 and S2, respectively. The global warming potential (GWP, CH₄ + N₂O) and yield-scaled GWP were still substantially lower by 62 and 59%, respectively, in AWD than in CF under S2, but the reduction was not realized under S1 due to the relatively smaller CH₄ reduction and increased N₂O emission. The results confirm that pre-season aerobic stubble decomposition and earlier implementation of AWD enhanced AWD’s mitigation potential in reducing substantially the CH₄ emission from the tropical rice double-cropping system.     

Successful treatment of suspected exertional myopathy in a rhea (Rhea americana).

A 7-yr-old, adult, female greater rhea (Rhea americana) from the National Zoological Park presented with a 24-hr history of severe left leg lameness that progressed to an inability to stand. Blood work revealed creatine phosphokinase (CPK) above 50,000 U/L and elevated lactate dehydrogenase. The bird's condition deteriorated over the next week. The bird's CPK increased to over 208,400 U/L. Aggressive intravenous fluids and physical therapy along with oral anxiolytic and muscle-relaxant drugs were instituted. After 2 wk of aggressive therapy, initial signs of improvement were noted. By day 28, the bird was able to walk unassisted with no noticeable lameness. This is one of the few reported cases of successful treatment of suspected ratite exertional myopathy. It is believed that success in this case can be attributed to persistent, aggressive physical therapy, muscle relaxants, and anxiolytics aimed to counteract the hyperexcitable nature of these birds.     

Influence of plant communities and soil properties on trace gas fluxes in riparian northern hardwood forests

Wetlands contribute significant amounts of greenhouse gases to the atmosphere, yet little is known about what variables control gas emissions from these ecosystems. There is particular uncertainty about forested riparian wetlands, which have high variation in plant and soil properties due to their location at the interface between land and water. We investigated the fluxes of carbon dioxide (CO₂), nitrous oxide (N₂O), and methane (CH₄) and associated understory vegetation and soil parameters at five northern hardwood riparian sites in the Adirondack Park, NY, USA. Gas fluxes were measured in field chambers 4 times throughout the summer of 2008. CO₂ flux rates ranged from 0.01 to 0.10 g C m⁻² h⁻¹, N₂O fluxes ranged from −0.27 to 0.65 ng N cm⁻² h⁻¹ and CH₄ flux rates ranged from −1.44 to 3.64 mg CH₄ m⁻² d⁻¹. Because we observed both production and consumption of N₂O and CH₄, it was difficult to discern relationships between flux and environmental parameters such as soil moisture and pH. However, there were strong relationships between ecosystem-scale variables and flux. For example, CO₂ and N₂O flux rates were most strongly related to percent plant cover, i.e., the site with the lowest vegetation cover had the lowest CO₂ and highest N₂O emissions. These ecosystem-scale predictive relationships suggest that there may be prospects for scaling information on trace gas fluxes up to landscape and regional scales using information on the distribution of ecosystem or soil types from remote sensing or geographic information system data.     

Influence of coarse wood and pine saplings on nitrogen mineralization and microbial communities in young post-fire Pinus contorta

Nitrogen (N) limits productivity in many coniferous forests of the western US, but the influence of post-fire structure on N cycling rates in early successional stands is not well understood. We asked if the heterogeneity created by downed wood and regenerating pine saplings affected N mineralization and microbial community composition in 15-yr old lodgepole pine (Pinus contorta var. latifolia) stands established after the 1988 fires in Yellowstone National Park (Wyoming, USA). In three 0.25-ha plots, we measured annual in situ net N mineralization in mineral soil using resin cores (n = 100 per plot) under pine saplings, downed wood (legacy logs that survived the fire, and fire-killed trees that had fallen and were contacting or elevated above the ground), and in bare mineral soil. Annual in situ net N mineralization and net nitrification rates were both greater in bare mineral soil (8.4 ± 0.6 and 3.6 ± 0.3 mg N kg_soil⁻¹ yr⁻¹, respectively) than under pine saplings, contact logs, or elevated logs (ca. 3.9 ± 0.5 and 0.8 ± 0.1 mg N kg_soil⁻¹ yr⁻¹, respectively). Net nitrification was positively related to net N mineralization under all treatments except for elevated logs. In laboratory incubations using ¹⁵N pool dilution, NH₄⁺ consumption exceeded gross production by a factor of two in all treatments, but consumption and gross production were similar among treatments. Contrary to our initial hypothesis, microbial community composition also did not vary among treatments. Thus, two- to three-fold differences in in situ net N mineralization rates occurred despite the similarity in microbial communities and laboratory measures of gross production and consumption of NH₄⁺ among treatments. These results suggest the importance of microclimate on in situ annual soil N transformations, and differences among sites suggest that broader scale landscape conditions may also be important.     

Ploidy reduction in blackberry

Polyploidy in blackberries and ploidy differences between Rubus species are obstacles to the efficient introduction of valuable germplasm, both intra- and interspecific, into blackberry breeding programs. Expansion of the germplasm base would be facilitated by reducing the ploidy level of blackberry cultivars to the diploid level. In this report selection of twin seed, interspecific hybridization, and pollen irradiation were compared as methods in the recovery of dihaploids from tetraploid blackberry cultivars. One dihaploid was obtained through selection of twin seed and several were obtained following interspecific hybridization. The infrequency of twinning and difficulty in detecting twin seed in Rubus reduced the efficiency of this method. The efficiency with which dihaploids could be obtained following interspecific hybridization varied with the pollen parent. Reduced seed set and seed quality following pollinations with respectively R. parvifolius and R. hirsutus could be used to advantage in the recovery of dihaploids from blackberries. Ploidy reduction in several tetraploid blackberry cultivars was obtained following pollinations with 100 and 150 kR gamma irradiated pollen. Most of the seedlings obtained at the 50 kR dosage were aneuploid. Pollen irradiation at 150 kR was the most efficient method of obtaining dihaploids from tetraploid blackberries. Twenty percent of the seedlings obtained following this treatment were dihaploid.