The excretion of ammonium by enchytraeids (Cognettia sphagnetorum)

Enchytraeids are involved both directly and indirectly in decomposition processes and nitrogen mineralization in soil. Their influence is especially important in nitrogen poor ecosystems such as heathland where the enchytraeid species, Cognettia sphagnetorum, is often abundant and playing a significant role in the N-cycling. The objective of this study was to quantify NH₄⁺-N excretion of C. sphagnetorum at different temperatures. The results were combined with investigations of population dynamics during one year to estimate annual NH₄⁺-N excretion of the population of C. sphagnetorum in a dry Danish heath soil. C. sphagnetorum significantly increased its NH₄⁺-N excretion rate with increasing temperature. At 5 °C about 0.5 μg NH₄⁺-N mg dry weight⁻¹ day⁻¹ was excreted increasing to about 3.3 μg NH₄⁺-N mg dry weight⁻¹ day⁻¹ at 20 °C. Average enchytraeid biomass in the field was 2.5-3.5 g dry weight m⁻² during cool and wet periods. Dry and warm conditions in May and June, 2008, had a drastic and long-term negative impact on the enchytraeid community. The excretion of NH₄⁺-N by enchytraeids was therefore highest during the cool and moist months despite low temperatures (October 2007-May 2008) and amounted to about 2 mg NH₄⁺-N m⁻² day⁻¹ during this period. The estimated annual NH₄⁺-N excretion of the enchytraeid community was approximately 0.3 g N m⁻² year⁻¹. The results of the present study and the method described for estimation of N-excretion can increase our understanding of enchytraeids’ role in nitrogen mineralization.     

Connecting knowledge resources to the veterinary electronic health record: opportunities for learning at point of care

Electronic health records (EHRs) provide clinical learning opportunities through quick and contextual linkage of patient signalment, symptom, and diagnosis data with knowledge resources covering tests, drugs, conditions, procedures, and client instructions. This paper introduces the EHR standards for linkage and the partners-practitioners, content publishers, and software developers-necessary to leverage this possibility in veterinary medicine. The efforts of the American Animal Hospital Association (AAHA) Electronic Health Records Task Force to partner with veterinary practice management systems to improve the use of controlled vocabulary is a first step in the development of standards for sharing knowledge at the point of care. The Veterinary Medical Libraries Section (VMLS) of the Medical Library Association's Task Force on Connecting the Veterinary Health Record to Information Resources compiled a list of resources of potential use at point of care. Resource details were drawn from product Web sites and organized by a metric used to evaluate medical point-of-care resources. Additional information was gathered from questions sent by e-mail and follow-up interviews with two practitioners, a hospital network, two software developers, and three publishers. Veterinarians with electronic records use a variety of information resources that are not linked to their software. Systems lack the infrastructure to use the Infobutton standard that has been gaining popularity in human EHRs. While some veterinary knowledge resources are digital, publisher sites and responses do not indicate a Web-based linkage of veterinary resources with EHRs. In order to facilitate lifelong learning and evidence-based practice, veterinarians and educators of future practitioners must demonstrate to veterinary practice software developers and publishers a clinically-based need to connect knowledge resources to veterinary EHRs.     

Using occurrence records to model historic distributions and estimate habitat losses for two psammophilic lizards

Estimating historic distributions of species is a critical step in evaluating current levels of habitat loss, evaluating sites for potential restoration and reintroductions, and for conservation planning at a landscape scale. However historic distributions can be difficult to estimate objectively because substantial habitat changes may have occurred prior to comprehensive surveys. As a means to address this question, we evaluated a novel approach by creating spatial niche models for two species of psammophilic lizards. Using a partitioned Mahalanobis D² analysis and abiotic variables that were independent of anthropogenic change, we created niche models for the federally threatened Coachella Valley fringe-toed lizard (Uma inornata) and for the flat-tailed horned lizard (Phrynosoma mcallii). The niche models estimated that within the Coachella Valley there were originally 32,164 ha of potential habitat for the fringe-toed lizard and 33,502 ha of potential habitat for the horned lizard. After screening these estimates of historic habitat for current conditions that would render that potential habitat unsuitable, we calculated a 91-95% loss of potential habitat for the fringe-toed lizard and an 83-92% loss for the horned lizard. Unlike the fringe-toed lizard, the horned lizard also occurs outside the Coachella Valley. Conducting a similar analysis throughout its range would provide an objective estimate of the total habitat loss experienced by this species. This information could be used to address whether granting it federal or state protection is warranted. For species whose distributions can be modeled with abiotic variables such as soils, elevation, topography, and climate, this approach may have broad applications for resolving questions regarding their current levels of habitat loss and regional conservation planning.     

Mitochondrial genome sequences illuminate maternal lineages of conservation concern in a rare carnivore

Background  

Science-based wildlife management relies on genetic information to infer population connectivity and identify conservation units. The most commonly used genetic marker for characterizing animal biodiversity and identifying maternal lineages is the mitochondrial genome. Mitochondrial genotyping figures prominently in conservation and management plans, with much of the attention focused on the non-coding displacement ("D") loop. We used massively parallel multiplexed sequencing to sequence complete mitochondrial genomes from 40 fishers, a threatened carnivore that possesses low mitogenomic diversity. This allowed us to test a key assumption of conservation genetics, specifically, that the D-loop accurately reflects genealogical relationships and variation of the larger mitochondrial genome.     

GIS habitat analysis for lesser prairie-chickens in southeastern New Mexico

Background  

We conducted Geographic Information System (GIS) habitat analyses for lesser prairie-chicken (LPCH, Tympanuchus pallidicinctus) conservation planning. The 876,799 ha study area included most of the occupied habitat for the LPCH in New Mexico. The objectives were to identify and quantify: 1. suitable LPCH habitat in New Mexico, 2. conversion of native habitats, 3. potential for habitat restoration, and 4. unsuitable habitat available for oil and gas activities.     

Evaluation of an erosion-sediment transport model for a hillslope using laboratory flume data

Climate change can escalate rainfall intensity and cause further increase in sediment transport in arid lands which in turn can adversely affect water quality. Hence, there is a strong need to predict the fate of sediments in order to provide measures for sound erosion control and water quality management. The presence of microtopography on hillslopes influences processes of runoff generation and erosion, which should be taken into account to achieve more accurate modelling results. This study presents a physically based mathematical model for erosion and sediment transport coupled to one-dimensional overland flow equations that simulate rainfall-runoff generation on the rill and interrill areas of a bare hillslope. Modelling effort at such a fine resolution considering the flow connection between interrill areas and rills is rarely verified. The developed model was applied on a set of data gathered from an experimental setup where a 650 cm×136 cm erosion flume was pre-formed with a longitudinal rill and interrill having a plane geometry and was equipped with a rainfall simulator that reproduces natural rainfall characteristics. The flume can be given both longitudinal and lateral slope directions. For calibration and validation, the model was applied on the experimental results obtained from the setup of the flume having 5% lateral and 10% longitudinal slope directions under rainfall intensities of 105 and 45 mm/h, respectively. Calibration showed that the model was able to produce good results based on the R2(0.84) and NSE(0.80) values. The model performance was further tested through validation which also produced good statistics(R2=0.83, NSE=0.72). Results in terms of the sedigraphs, cumulative mass curves and performance statistics suggest that the model can be a useful and an important step towards verifying and improving mathematical models of erosion and sediment transport.     

Effects of bark harvest and other human activity on populations of the African cherry (Prunus africana) on Mount Oku, Cameroon

Bark extracts from the African cherry, Prunus africana (Rosaceae), are a popular treatment for enlarged prostates. Harvests of the bark began in Cameroon in the 1970s. Because of concerns regarding the sustainability of the trade, the species is included on the IUCN Red List and in CITES Appendix II. This study followed five P. africana populations in the Kilum-Ijim Forest Preserve on Mount Oku, Cameroon, examining growth, mortality and reproductive parameters, as well as response to harvest and other human activities. During the first part of the study (1998–1999), the forest had limited human activity; by the second part (2007–2008), more activity was apparent, including wildfires, grazing and a forest-wide bark harvest in 2005/2006. Over the study period, population structure differed from a typical J-shaped frequency curve for long-lived species, which may reflect past harvesting. After the 2005/2006 harvest, the population structure had shifted slightly toward the smaller size classes. In addition, the number of surviving trees was reduced in all size classes. About half of the reproductive trees died during the study. Size class was not a significant predictor of death, but the location of the harvest (plot) was. All trees affected by wildfires died, suggesting that the species is not adapted to fire. Trees that were harvested without disrupting the vascular cambium survived better and had minimal loss of crown. Thus, the fate of the trees in a given plot may lie in the care taken by an individual harvester. Average growth (0.34 cm per year) was not significantly different among the size classes. Crown die-back significantly reduced fruit production, obscuring the asynchronous alternating fruiting pattern. Seedling numbers followed a similar alternating pattern, but survival was negligible due to grazing. The combined factors of mortalities of a large percentage of reproductive trees (especially the largest ones), highly reduced fruit production and poor seedling survival offer a bleak prognosis for future regeneration and long-term persistence of the species in this forest. Only after decades of harvest are existing standing crop inventories and scientifically based annual quotas now being determined. It is known that the trees are easily domesticated. Efforts have been intensified to train villagers and community forest managers in vegetative propagation techniques and nursery practices, offering some hope that the species can be successfully managed to provide for sustainable harvests and dependable rural livelihoods.     

Applying Chemometrics to Determine Dispersion of Mine Tailing-Affected Sediments from Submarine Tailing Disposal in Bøkfjorden,Northern Norway

Mine tailing management is one of the largest environmental issues related to mining operation. This study uses chemometrics to assess the dispersion of iron mine tailing-affected sediments in Bøkfjorden, Northern Norway. Metal concentrations (Al, As, Cd, Cr, Cu, Fe, Mn, Ni, Pb, Zn) and physico-chemical sediment characteristics (conductivity, organic matter, sulphate, chloride, grain size, CaCO₃, pH) were analysed in seven sediment cores collected in a transect out of the fjord along with two reference cores. Results of hierarchical cluster analysis and principal component analysis allowed to distinguish between mine tailing-affected and non-affected sediments. Non-affected sediments were especially characterised by high levels of organic matter whilst mine tailing-affected sediments varied significantly in sediment characteristics depending on location in the fjord. Crucial parameters to reveal mine tailing-affected sediments varied between the target metal Fe along with metals of Cd and Mn, albeit less significant. Variations in mine tailing-affected sediment characteristics could be attributed to other anthropogenic activities in the fjord. Despite potential disturbances, chemometrics made it possible to identify dispersion of mine tailing-affected sediments to cover the inner and middle parts of the fjord. The study demonstrates the advantage of applying chemometrics on complex fjord systems, which in this case was used to distinguish mine tailing-affected sediments from areas with elevated levels of metals not necessarily related to the mine.