Effects of Transglutaminase on Rheology,Microstructure, and Baking Properties of Frozen Dough

The improving effects of transglutaminase (TGase) were investigated on the frozen dough system and its breadmaking quality. Rheological properties and microstructure of fresh and frozen doughs were measured using a Rapid Visco‐Analyser (RVA), dynamic rheometer, and scanning electron microscopy (SEM). The frozen doughs with three storage periods (1, 3, and 5 weeks at –18°C) were studied at three levels (0.5, 1.0, and 1.5%) of TGase. As the amount of TGase increased, hot pasting peak viscosity and final viscosity from the RVA decreased, but breakdown value increased. The TGase content showed a positive correlation with both storage modulus G′ (elastic modulus) and the loss modulus G″ (viscous modulus): G′ was higher than G″ at any given frequency. The SEM micrographs showed that TGase strengthened the gluten network of fresh, unfrozen dough. After five weeks of frozen storage at –18°C, the gluten structure in the control dough appeared less continuous, more disrupted, and separated from the starch granules, while the dough containing 0.5% TGase showed less fractured gluten network. Addition of TGase increased specific volume of bread significantly (P < 0.05) with softer bread texture. Even after the five weeks of frozen storage, bread volume from dough with 1.5% TGase was similar to that of the fresh control bread (P < 0.05). The improving effects of TGase on frozen dough were likely the result of the ability of TGase to polymerize proteins to stabilize the gluten structure embedded by starch granules in frozen doughs.     

Genome‐wide identification of pathogenicity genes in Xanthomonas oryzae pv. oryzae by transposon mutagenesis

A transposon mutant library was constructed from the bacterial blight pathogen Xanthomonas oryzae pv. oryzae (Xoo) KACC10331 by Tn5 transposon mutagenesis. The susceptible rice cultivar Milyang 23 was inoculated with a total of 24 540 mutants resistant to kanamycin and 67 avirulent or reduced‐pathogenicity mutant strains were selected for study. Southern hybridization verified that 84 mutant strains had single‐copy insertions and their single‐transposon insertion sites were identified by sequencing analysis combined with thermal asymmetric interlaced (TAIL)‐PCR. The single‐transposon‐tagged sequences of 21 mutant strains belonged to pathogenicity‐related genes previously reported in Xanthomonas species, while the other 46 single‐transposon‐tagged sequences included diverse functional genes encoding, five cell‐wall‐degrading enzymes, three fimbrial and flagella assembly regulators, five regulatory proteins, 15 metabolic regulators and 18 hypothetical proteins, which were identified as novel pathogenicity genes of Xoo.     

Estimation of productivity growth,technical progress,and efficiency changes in the Korean offshore fisheries

In this study, changes in total factor productivity of 12 Korean offshore fisheries between 1997 and 2009 were estimated through the Malmquist productivity index, which is a nonparametric method. Also, the cause of such changes in productivity of each fishery was analyzed more specifically by segmenting into factors for technological progress and technical efficiency. As a result of this analysis, the total factor productivity change of the entire offshore fisheries was −6.0 %. Changes in the technical efficiency and technological level factors, respectively, contributed 0.2 and −6.2 % to this rate of decrease in total factor productivity; that is, inactivity of technological progress led to the decrease in productivity of the offshore fisheries. In addition, technological progress and technical efficiency were found to differently influence the change in total factor productivity of each fishery. In order for each fishery to improve productivity, better rational fisheries management policies by the government and efforts by the fishing industry and individual fishing business units must accompany factors that promote productivity increase.     

Salinity changes in the anadromous river pufferfish,Takifugu obscurus,mediate gene regulation

This study aimed to better understand the hydromineral regulatory response of the anadromous river pufferfish, Takifugu obscurus, to salinity changes through real-time RT-PCR. After abrupt transfer from 30 or 5 psu to 5 or 30 psu, respectively, we analyzed the mRNA expression of Na⁺/K⁺ ATPase, prolactin receptor, and aquaporin from osmoregulatory organs of the river pufferfish such as gills, kidney, and intestine. Na⁺/K⁺ ATPase showed notable changes in the gills and kidney when salinity was increased. In the gills, the expression level of Na⁺/K⁺ ATPase suddenly increased within a day after abrupt transfer from 5 to 30 psu and then slightly declined within 2 days after exposure. In the kidney, Na⁺/K⁺ ATPase has shown consistently high mRNA expression after the increase in salinity. Expression levels of the prolactin receptor gene increased when environmental salinity decreased. In the intestine, gene expression of the prolactin receptor remained high, even when salinity decreased. To the contrary, there was a steady increase or decrease in mRNA expression in the kidney in response to salinity decrease or increase, respectively. As for aquaporins, aquaporin 1 was mainly expressed in the intestine and kidney, and aquaporin 3 was mainly expressed in the gills and intestine. In the gills, increased expression of aquaporin 3 was found after transfer to lower salinity and in the intestine and kidney, a decrease in salinity followed by an abrupt decrease in aquaporin 1 and aquaporin 3. Contrastingly, the expression of these genes increased in the intestine after transfer to 30 psu. Osmoregulatory genes were expressed in diverse organs, apparently to overcome an influx or exhaust of water or ions. A superior adaptation ability of the river pufferfish to a wide range of salinities is most reasonably due to active osmoregulatory processes mediated by the genes monitored here.     

Identification of Vibrio harveyi,Vibrio ichthyoenteri,and Photobacterium damselae isolated from olive flounder Paralichthys olivaceus in Korea by multiplex PCR developed using the rpoB gene

Major fish bacterial diseases in Korea are edwardsiellosis, streptococcosis, and vibriosis. Among vibrionaceae, Listonella anguillarum, Vibrio harveyi, V. ichthyoenteri, and Photobacterium damselae were identified as causative organisms of vibriosis in flounder. In this study, we developed a multiplex PCR method using the RNA polymerase β subunit (rpoB) gene, known as a housekeeping gene for identification of Vibrio spp. causing vibriosis in flounder. Three pairs of PCR primers were designed based on the rpoB sequence of three species, V. harveyi, V. ichthyoenteri, and P. damselae. The PCR assay, using a mixture of six primers, yielded amplicons of 601, 434, and 533 bp in V. harveyi, V. ichthyoenteri, and P. damselae. None of the untargeted species yielded an amplicon. The detection limits for pure culture in kidney were 2.5 × 10⁴ cfu/g kidney for V. harveyi, 2.5 × 10⁵ cfu/g kidney for V. ichthyoenteri, and 2.5 × 10⁶ cfu/g kidney for P. damselae. From the colonies on TCBS agar plates of different samples, 632 Vibrio spp. isolated from aquacultured flounder between 2004 and 2010 were identified by the multiplex PCR method. As a result, 265 strains (41.9 %) were V. ichthyoenteri; 115 strains (18.2 %) were V. harveyi and 72 strains (11.4 %) were P. damselae.     

Provenance variation in Christmas tree characteristics in subalpine fir (Abies lasiocarpa) planted in Denmark and Iceland

A field test with 26 provenances of subalpine fir and corkbark fir was established at three sites in Denmark and one site in Iceland in 1999. Survival, growth and Christmas tree quality were assessed after 10 growing seasons in Denmark and 12 in Iceland. Provenances showed significant differences for all measured traits. The western-most subalpine fir provenances from Washington state and British Columbia showed the overall best results in Denmark with the highest survival (after 15 years), fastest growth in height and highest Christmas tree quality and profitability as well as both good postharvest needle retention and high resistance to pests. The corkbark fir provenances also showed high Christmas tree quality and the lowest frequency of fork formation, but corkbark fir provenances also exhibited the poorest postharvest needle retention. In Iceland, the corkbark fir provenances generally showed the highest survival rate and Christmas tree quality. The White River provenance from British Columbia is recommended for use in Denmark. The Mount Taylor provenance from the Cibola National Forest in New Mexico is recommended for use in Iceland.     

Effect of excess zinc and arbuscular mycorrhizal fungus on bioproduction and trace element nutrition of Tomato (Solanum lycopersicum L. cv. Micro-Tom)

ABSTRACT

The effect of excess Zn and arbuscular mycorrhizal (AM) fungus on bioproduction and trace element nutrition were investigated in tomato. In a completely randomized factorial design, the experimental treatments – Zn addition at 0 (normal) and 300 (excess) mg Zn kg^?1 soil, and AM inoculation (non-AM and Rhizophagus irregularis) – were set up in a growth chamber for 10 weeks. Generally, AM effects on the available Zn, Mn, Cu, and Fe in the rhizosphere soil were in tandem with the effects in host tissues. Under normal Zn condition, AM enhanced Cu availability in the rhizosphere, optimized the Cu:Zn balance in shoots, and increased the host biomass production. Excess Zn reduced mycorrhizal colonization in AM plants and the total plant biomass in both AM and non-AM plants. Although AM decreased the Zn concentrations in soil and host tissues under excess Zn, the distortions in host TE balance were not significantly ameliorated by the fungus. While Zn in fruit was within the safety threshold, Mn deficiency in the fruit was observed under excess Zn, alongside increased root-to-fruit Fe and Cu translocations. Mycorrhizal reductions in soil and tissue Mn concentrations were considered a minus in terms of probable symbiont amelioration of Mn:Zn in-balance under excess Zn. Additional microbe(s) that can enhance Mn homeostasis might be helpful in tomato under elevated soil Zn.     

Genetic diversity of the myrtle rust pathogen (Austropuccinia psidii) in the Americas and Hawaii: Global implications for invasive threat assessments

Since the myrtle rust pathogen (Austropuccinia psidii) was first reported (as Puccinia psidii) in Brazil on guava (Psidium guajava) in 1884, it has been found infecting diverse myrtaceous species. Because A. psidii has recently spread rapidly worldwide with an extensive host range, genetic and genotypic diversities were evaluated within and among A. psidii populations in its putative native range and other areas of myrtle rust emergence in the Americas and Hawaii. Microsatellite markers revealed several unique multilocus genotypes (MLGs), which grouped isolates into nine distinct genetic clusters [C1–C9 comprising C1: from diverse hosts from Costa Rica, Jamaica, Mexico, Puerto Rico, and USA‐Hawaii, and USA‐California; C2: from eucalypts (Eucalyptus spp.) in Brazil/Uruguay and rose apple (Syzygium jambos) in Brazil; C3: from eucalypts in Brazil; C4: from diverse hosts in USA‐Florida; C5: from Java plum (Syzygium cumini) in Brazil; C6: from guava and Brazilian guava (Psidium guineense) in Brazil; C7: from pitanga (Eugenia uniflora) in Brazil; C8: from allspice (Pimenta dioica) in Jamaica and sweet flower (Myrrhinium atropurpureum) in Uruguay; C9: from jabuticaba (Myrciaria cauliflora) in Brazil]. The C1 cluster, which included a single MLG infecting diverse host in many geographic regions, and the closely related C4 cluster are considered as a “Pandemic biotype,” associated with myrtle rust emergence in Central America, the Caribbean, USA‐Florida, USA‐Hawaii, Australia, China‐Hainan, New Caledonia, Indonesia and Colombia. Based on 19 bioclimatic variables and documented occurrences of A. psidii contrasted with reduced sets of specific genetic clusters (subnetworks, considered as biotypes), maximum entropy bioclimatic modelling was used to predict geographic locations with suitable climate for A. psidii which are at risk from invasion. The genetic diversity of A. psidii throughout the Americas and Hawaii demonstrates the importance of recognizing biotypes when assessing the invasive threats posed by A. psidii around the globe.