A 20‐year census of a rocky littoral fish community in Lake Tanganyika

Takeuchi Y, Ochi H, Kohda M, Sinyinza D, Hori M. A 20‐year census of a rocky littoral fish community in Lake Tanganyika. Ecology of Freshwater Fish 2010: 19: 239–248. © 2010 John Wiley & Sons A/S Abstract – Tropical fish communities are highly diverse with large numbers of allied species coexisting. Concerns have been raised about changes in such communities caused by anthropogenic disturbances, but little is known about long‐term changes. We investigated changes in the littoral fish community of Lake Tanganyika. A 10 × 40‐m quadrat was placed on a rocky shore in the southern part of the lake, and fish censuses were conducted once a year during most years in 1988–2008. In total, 54 cichlid and 6 non‐cichlid species were recorded. Aufwuch feeders were most abundant, followed by plankton feeders, detritus feeders, piscivores, shrimp eaters, zoo‐benthos eaters, and scale eaters. Species richness and abundance were sustained over the study period, with biodiversity, as evaluated by the Shannon–Wiener index, remaining high. However, Mantel tests between the Bray–Curtis index and the difference in years between compared censuses revealed that the species composition of the community gradually changed with time. The fish community gradually underwent a change that may be due to low anthropogenic impacts on food condition. Our results promote awareness about the conservation of diversity in Lake Tanganyika.     

Spawning induction and seed production of Eastern little tuna,Euthynnus affinis (Cantor, 1849), in the post‐ and pre‐spawning seasons by hormonal treatment in a semi‐closed recirculation system with elevated temperature

We previously established a method for spawning induction in Eastern little tuna (ELT) Euthynnus affinis (Cantor, 1849) by administering a gonadotropin‐releasing hormone analog (GnRHa) during the natural spawning season in Japan (August–October). In order to establish seed production of ELT in the off‐spawning season, we first conducted three spawning induction trials by GnRHa administration from October 2011 to January 2012 using ELT broodstock (2 years old; three females and four males) maintained in a 10‐m³ tank with a semi‐closed recirculation system and static elevated temperature. Average water temperature and daily egg production in three trials lasting 11–15 days were 27.0 ± 0.09°C and 268 173 eggs (Trial 1), 27.0 ± 0.11°C and 277 9098 eggs (Trial 2), and 25.5 ± 0.39°C and 291 113 eggs (Trial 3) respectively. Mean fertilization rate and mean hatching rate were 70.4% and 60.5% (Trial 1), 83.9% and 79.6% (Trial 2), and 62.5% and 57.4% (Trial 3) respectively. We also succeeded in producing ELT larvae in the pre‐spawning season (April–July), although the quantity and quality of larvae produced were inferior to those produced in other calendar months. In trials involving periodic GnRHa administration during the off‐spawning seasons, hatched larvae were obtained in the 10‐m³ tank after six of nine administrations in the 2011–2012 off‐spawning season and in 16 of 19 administrations in the 2012–2013 off‐spawning season. The findings of this study demonstrated that hormonal treatment and thermal control could be used to extend the spawning period in ELT, potentially allowing larval production in the post‐ and pre‐spawning seasons.     

Transgenic Nile tilapia (Oreochromis niloticus) over-expressing growth hormone show reduced ammonia excretion

The growth of aquaculture has negatively affected the environment due to the high levels of nitrogen excreted by farmed fish. Here we propose that modifying the nitrogen metabolism of the fish themselves using transgenic technology might solve the pollution problem. Growth hormone (GH) is known to increase protein retention and absorption, and is thought to reduce ammonia excretion. Thus, we produced transgenic Nile tilapia (Oreochromis niloticus) that over-expressed the GH gene throughout their bodies. Our findings showed that the food-conversion efficiency of the transgenic fish was 35% higher than that of their non-transgenic siblings. The rearing period required for the transgenic fish to reach a body weight of 20 g was about 75% of that required for non-transgenic fish that were fed the same type and quantity of food. The total amount of ammonium-nitrogen excreted by the transgenic fish was about 69% of that excreted by the wild-type fish over their lifetime. These results suggest that our transgenic approach has the potential to reduce the amount of nitrogen pollution caused by farmed fish. This strategy is a promising option for making aquaculture more ‘eco-friendly’.     

Genome-wide SNP genotyping reveals hidden population structure of an acroporid species at a subtropical coral island: Implications for coral restoration

1. It is essential to consider genetic composition for both conventional coral restoration management and for initiating new interventions to counter the significant global decline in living corals. Population genetic structure at a fine spatial scale should be carefully evaluated before implementing strategies to achieve self-sustaining ecosystems via coral restoration.
2. This study investigated the population genetic structure of two acroporid species at Kume Island, Okinawa, Japan. There were 140 colonies of Acropora digitifera collected from seven study sites, and 81 colonies of Acropora tenuis from six sites. In total, 384 single nucleotide polymorphism (SNP) loci for A. digitifera and 470 SNPs for A. tenuis were obtained using a comparatively economical technique, Multiplexed ISSR Genotyping by sequencing.
3. Observed heterozygosity was significantly lower than expected heterozygosity at all SNP sites in both acroporid species, suggesting deficient genetic diversity possibly caused by past massive coral bleaching. Even though both species are broadcast spawners, the population structure was different in the two species. No detectable structure was evident in A. digitifera, but two distinct clades were found in A. tenuis. The genetic homogeneity of A. digitifera at Kume Island suggests that this species could be used as a focal species for active restoration in terms of genetic differentiation at this island. By contrast, A. tenuis unexpectedly included two distinct clades with little or no admixture within a small study area, possibly representing two reproductively isolated cryptic species. Thus, when using A. tenuis, it would be prudent to avoid disturbing the genetic composition of wild populations until this question is answered.

     

Breed differences in genotype and allele frequency of catechol O-methyltransferase gene polymorphic regions in dogs

Catechol O-methyltransferase (COMT) inactivates catecholamines and catechol-containing drugs such as L-DOPA. The common genetic polymorphism Val158Met in the human COMT gene is suspected to be associated with "persistence" or risk for schizophrenia. In this study, we attempted to identify the canine COMT gene fragment and to find a similar polymorphism and to reveal its genetic distribution among five representative canine breeds. We found that the amplified gene consisted of 663 bp nucleotides and was 84% homologous with the human COMT gene. The single nucleotide polymorphisms, guanine adenine substitution, were observed at the 39th, 216th and 482nd nucleotides. From the genotyping of the 216th polymorphism among 266 dogs by the polymerase chain reaction-restriction fragment length polymorphism method with restriction enzyme EagI, and that of the 482nd polymorphism with restriction enzyme SfcI, we found inter-breed variations of genotypes as well as of allelic frequencies for both of these polymorphic regions. These results suggest that the identified polymorphisms will be useful tools in elucidating the genetic background of canine behavioral traits.     

Agent-based modeling of complex social–ecological feedback loops to assess multi-dimensional trade-offs in dryland ecosystem services

Context

Recent conceptual developments in ecosystem services research have revealed the need to elucidate the complex and unintended relationships between humans and the environment if we are to better understand and manage ecosystem services in practice.

Objectives

This study aimed to develop a model that spatially represents a complex human–environment (H–E) system consisting of heterogeneous social–ecological components and feedback mechanisms at multiple scales, in order to assess multi-dimensional (spatial, temporal, and social) trade-offs in ecosystem services.

Methods

We constructed an agent-based model and empirically calibrated it for a semi-arid region in Northeast China, and examined ecosystem service trade-offs derived from the Sloping Land Conversion Program (SLCP), which is based on payment for ecosystem services. This paper describes our model, named Inner Mongolia Land Use Dynamic Simulator (IM-LUDAS), using the overview, design concepts, and details + decision (ODD + D) protocol and demonstrates the capabilities of IM-LUDAS through simulations.

Results

IM-LUDAS represented typical characteristics of complex H–E systems, such as secondary and cross-scale feedback loops, time lags, and threshold change, revealing the following results: tree plantations expanded by the SLCP facilitated vegetation and soil restoration and household change toward off-farm livelihoods, as expected by the government; conversely, the program caused further land degradation outside the implementation plots; moreover, the livelihood changes were not large enough to compensate for income deterioration by policy-induced reduction in cropland.

Conclusions

IM-LUDAS proved itself to be an advanced empirical model that can recreate essential features of complex H–E systems and assess multi-dimensional trade-offs in ecosystem services.