Exploring the theory and practice of participatory research in US sustainable agriculture: A case study in insect pest management

Farmers have always played a key role in developing and testing agricultural technology. Scientist initiated agricultural research models and methods that explicitly include the participation of farmers principally have been developed and implemented in the Third World. Recently, these strategies have begun to receive attention in the US sustainable agriculture research community. This paper presents a case study where scientists collaborated with farmers in developing, implementing, and revising research in peach insect pest management in sustainable agroecosystems in California. A theoretical framework constructed from emerging epistemological and philosophical premises is used to point out the imperative of including participatory strategies in US sustainable agriculture. Methods drawn from Rapid Rural Appraisal were adapted to fit the local circumstances of working within intensive peach production systems and with a US farmer or ganization, California Clean Growers Association, in developing a research agenda. Farmer-scientist participation continued throughout the research implementation phases via individual and group meetings. A mid-project workshop provided a forum where farmers had explicit decision-making power over the course of the research project. Selected natural science research results are presented to illustrate the value of merging farmers' and scientists' knowledge in achieving relevant and scientifically interesting information. It is argued that the adoption and innovation of participatory research strategies in US sustainable agriculture will require confronting philosophical and methodological issues at individual and institutional levels.     

Structure and mechanism of the lactose permease of Escherichia coli

Membrane transport proteins that transduce free energy stored in electrochemical ion gradients into a concentration gradient are a major class of membrane proteins. We report the crystal structure at 3.5 angstroms of the Escherichia coli lactose permease, an intensively studied member of the major facilitator superfamily of transporters. The molecule is composed of N- and C-terminal domains, each with six transmembrane helices, symmetrically positioned within the permease. A large internal hydrophilic cavity open to the cytoplasmic side represents the inward-facing conformation of the transporter. The structure with a bound lactose homolog, beta-D-galactopyranosyl-1-thio-beta-D-galactopyranoside, reveals the sugar-binding site in the cavity, and residues that play major roles in substrate recognition and proton translocation are identified. We propose a possible mechanism for lactose/proton symport (co-transport) consistent with both the structure and a large body of experimental data.     

Development of A dormancy release technology: A review

Tuber dormancy can be released immediately in many commercially important potato cultivars by brief treatment (1-2 days) with bromoethane (BE) vapor at room temperature. The development of a large scale technology for BE application and safe removal through a capturing technique is necessary for successful application of this dormancy release method. Ideally, BE treatment of seed tubers would occur in a closed environment that would capture BE vapor in an unaltered form and allow controlled release for treatment of subsequent tuber lots. Results of screening studies for adsorbents indicate that the medium capacity activated carbon adsorbent, YAO has: i) a high capacity for BE; ii) a low capacity for water; and, iii) adsorbs and de-adsorbs BE quickly and easily. A plausible design of a large scale, dormancy release facility is presented. The proposed facility should meet present goals of the seed potato industry in an environmentally responsible manner.     

Assessment of bovine mammary chemokine gene expression in response to lipopolysaccharide, lipotechoic acid + peptidoglycan, and CpG oligodeoxynucleotide 2135

During intramammary infections pathogen associated molecular patterns (PAMPs) induce an inflammatory response, recognized clinically as mastitis. Recognition of PAMPs by mammary cells leads to the production of the pro-inflammatory cytokines, TNF-α and IL-1β. These cytokines augment the secretion of various chemokines that are responsible for directing the host cellular immune response, and consequently the outcome of infection. Previous research has shown that gram-negative and gram-positive bacteria elicit different types of innate immune responses. The purpose of this study, therefore, was to characterize the expression of various chemokine genes in bovine mammary gland explants in response to lipopolysaccharide (LPS), peptidoglycan (PTG) combined with lipotechoic acid (LTA), and CpG oligodeoxynucleotide (CpG-ODN) 2135 representing gram-negative bacteria, gram-positive bacteria, and bacterial DNA, respectively, to determine if these PAMPs induce different chemokine gene expression patterns. Explants from 3 Holstein cows were cultured with 10 μg/mL of LPS, LTA + PTG, or CpG-ODN 2135 for 6 and 24 h. Total RNA was extracted and the expression of CXCL8, MCP-1, MCP-2, MCP-3, MIP1-α, and RANTES genes was measured by real-time polymerase chain reaction (RT-PCR). Lipopolysaccharide significantly induced MCP-1, MCP-2, and MCP-3 expression, and slightly increased CXCL8 gene expression. The combined PAMPs, LTA + PTG, on the other hand, significantly induced MCP-1 gene expression, and slightly increased MCP-3 expression. No significant expression differences for any of the chemokine genes were observed in explants stimulated with CpG-ODN 2135. These results demonstrate that PAMPs associated with different mastitis-causing pathogens induce chemokine-specific gene expression patterns that may contribute to different innate immune responses to bacteria.     

The incorporation of environmentally derived 87Sr/86Sr and Sr/Ca in early otolith formation of Chinook salmon

Effective species management often requires understanding patterns of movement and habitat use. A common approach in identifying where individuals reside relies upon chemical tracers from the environment that are incorporated into an individual's tissues. For fish, isotopes in their otoliths, specifically the portion of their otolith formed during their larval stage, have been used to identify the natal origin. Complicating this work, however, is the fact that during this life stage, there is a shift in the source of isotopes deposited onto the growing otolith from maternally to environmentally derived. The objective of this study was to identify the portion of the otolith representing this transition to environmentally derived isotopes so as to accurately investigate questions of natal origin for a threatened population of fall Chinook salmon (Oncorhynchus tshawytscha). We exposed developing larvae to four treatments that differed in terms of their water strontium isotope ratio (⁸⁷Sr/⁸⁶Sr) and used change-point analysis of otolith ⁸⁷Sr/⁸⁶Sr and strontium to calcium ratio (Sr/Ca) to identify the otolith radius corresponding to the transition to environmentally derived isotopes. Our results indicated this transition occurred, on average, at 132 μm (⁸⁷Sr/⁸⁶Sr; ±50 μm standard deviation) and 127 μm (Sr/Ca; ±29 μm) from the otolith core, which corresponded to the developmental time between hatching and exogenous feeding. A substantial proportion of our otoliths (i.e., 61%) did not show convergence between otolith and water ⁸⁷Sr/⁸⁶Sr by the end of the 113-day experiment, which was likely due to the dietary contribution of marine-based feed. Therefore, we were unable to recommend an otolith radius to target for the purposes of reconstructing natal origin apart from being beyond approximately 130 μm.     

Fate of Dwarf Bunt Fungus Teliospores During Milling of Wheat into Flour

Wheat contaminated with teliospores of Tilletia controversa Kühn (TCK) was mixed with uncontaminated wheat and processed through the Kansas State University pilot mill. Two 50-bu lots of the contaminated mixture were cleaned, tempered, and milled. Approximately 500 samples of wheat, cleanings, and mill fractions were collected and examined for the presence of intact and broken TCK teliospores. Whole wheat samples (50 g) were washed, sieved through a 60-μm nylon sieve, and pelleted by centrifugation. Contents of the pellet were examined microscopically for the presence of TCK spores. The procedure was modified as needed to accommodate cleanings and mill fractions. Levels of spore contamination in whole wheat samples decreased at each step during the handling process, and large numbers of spores were found in materials that were sieved or aspirated from the grain. Very few spores were found in bran, germ, and shorts; none were detected in red dog or straight-grade flour. The results showed that a high percentage of spores can be removed from wheat by mechanical cleaning but that it is not feasible to remove all of them.