Crystal structure of the malaria vaccine candidate apical membrane antigen 1

Apical membrane antigen 1 from Plasmodium is a leading malaria vaccine candidate. The protein is essential for host-cell invasion, but its molecular function is unknown. The crystal structure of the three domains comprising the ectoplasmic region of the antigen from P. vivax, solved at 1.8 angstrom resolution, shows that domains I and II belong to the PAN motif, which defines a superfamily of protein folds implicated in receptor binding. We also mapped the epitope of an invasion-inhibitory monoclonal antibody specific for the P. falciparum ortholog and modeled this to the structure. The location of the epitope and current knowledge on structure-function correlations for PAN domains together suggest a receptor-binding role during invasion in which domain II plays a critical part. These results are likely to aid vaccine and drug design.     

Partial sequencing and expression of genes involved in glucose metabolism in adipose tissues and skeletal muscle of healthy cats

Impaired insulin sensitivity is increasingly recognised in cats, but sequences of genes involved in insulin-signalling are largely undetermined in this species. In this study, extended feline mRNA sequences were determined for the adiponectin, glucose transporter-1 (GLUT1), GLUT4, peroxisome proliferative activated receptor-gamma1 (PPARgamma1), PPARgamma2, plasminogen activator inhibitor-1 (PAI-1), monocyte chemoattractant protein-1 (MCP-1) and insulin receptor genes. Conserved dog-specific primers identified from human-dog mRNA alignments were used to amplify feline cDNA in the polymerase chain reaction (PCR). The feline sequences determined by this method were used to design feline-specific primers suitable for real-time PCR for quantification of gene expression in insulin sensitive tissues of healthy cats. Partial sequences of feline mRNAs had 86-95% identity with dog and human genes. Expression of adiponectin, GLUT1, GLUT4, PPARgamma1, PPARgamma2, PAI-1 and insulin receptor mRNA was detected and quantified in subcutaneous and visceral fat and skeletal muscle, whereas MCP-1 mRNA was detected in adipose tissue but not in skeletal muscle. Further characterisation of genes related to glucose metabolism in cats will provide additional insights into insulin-signalling mechanisms in this species.     

Ectomycorrhizal communities in a Mediterranean forest ecosystem dominated by <Emphasis Type="Italic">Quercus ilex</Emphasis>: seasonal dynamics and response to drought in the surface organic horizon

• Introduction   

Millions of hectares of Quercus ilex forests dominate disturbed landscapes in the western part of the Mediterranean basin. Although these forests are very widespread, little is known about the composition and structure of their associated ectomycorrhizal fungal communities.     

CRISPR-Cas Technology in Plant Science

CRISPR-Cas technology has raised considerable interest among plant scientists, both in basic science and in plant breeding. Presently, the generation of random mutations at a predetermined site of the genome is well mastered, just like the targeted insertion of transgenes, although both remain restricted to species or genotypes amenable for plant transformation. On the other hand, true genome editing, i.e. the deliberate replacement of one or several nucleotides of the genome in a predetermined fashion, is limited to some rather particular examples that generally concern genes allowing positive selection, for example tolerance to herbicides. Therefore, further technological developments are necessary to fully exploit the potential of genome editing in enlarging the gene pool beyond the natural variability available in a given species. In principle, the technology can be applied to any quality related, agronomical or ecological trait, under the condition of upstream knowledge on the genes to be targeted and the precise modifications necessary to improve alleles. Published proof of concepts concern a wide range of agronomical traits, the most frequent being disease resistance, herbicide tolerance and the biochemical composition of harvested products. The regulatory status of the plants obtained by CRISPR-Cas technology raises numerous questions, in particular with regard to the plants that carry in their genomes the punctual modifications caused by the presence of the Cas9 nuclease but not the nuclease itself. Without clarification by the competent authorities, CRISPR-Cas technology would continue to be a powerful tool in functional genomics, but its potential in plant breeding would remain untapped.     

Screening and selection of faba beans (<Emphasis Type="Italic">Vicia faba</Emphasis> L.) for cold tolerance and comparison to wild relatives

Since autumn-sown faba beans possess several advantages including higher seed yield over the spring cultivars, the study was aimed to screen and select cold tolerant accessions of faba beans (Vicia faba L.) and compare these to wild species in the highland of the west Mediterranean region, Turkey. A total of 114 accessions of Vicia species including 109 accessions of faba bean, three accessions of narbon bean (V. narbonensis L.) and two accessions of V. montbretii Fisch. et C.A. Mey. were screened for cold tolerance at seedling stage in two successive years, 2005–2006 and 2006–2007 growth seasons. Accessions were evaluated for cold tolerance using a 1 (Highly cold tolerant)-5 (Highly cold susceptible) visual scale. Considerable variation was found for cold tolerance and some agronomical characteristics in faba beans. Wild relatives of faba bean were found to be more tolerant to cold than those of cultivated faba beans. Although some pigmented accessions were free from freezing damage at −9.6°C without snow cover, accessions with white flowers were damaged. The proposed screening technique could easily be used to evaluate many faba bean accessions for cold tolerance. To increase yield, it was concluded that the cold tolerant accessions with high yield could be grown as autumn-sown crop in the target environment.     

Bilateral neuroepithelial choristomas of the optic disc in a cynomolgus monkey (Macaca fascicularis): a case report

A 6-year-old intact male cynomolgus monkey of Chinese origin was received at the Sierra Biomedical Facility. While physical examination revealed good body condition with no abnormalities, routine ophthalmic examination revealed bilateral proliferative optic neuropathy involving the dorsal aspect of the optic disc. No changes were noted in the appearance of the lesions over 8 months, and fluoroescein angiography revealed no abnormalities other than obstruction of the view of the retinal vessels by the lesions. Histopathologic studies revealed characteristics consistent with a diagnosis of bilateral neuroepithelial choristoma.     

Seroprevalence of brucellosis and its contribution to abortion in cattle,camel, and goat kept under pastoral management in Borana,Ethiopia

The involvement of Brucella infection in causing abortion was investigated in a breeding female subpopulation of 283 cattle, 756 camels, and 757 goats. Serum samples were serially tested using the Rose Bengal test and complement fixation test. The study showed that anti-Brucella antibodies were prevalent in 10.6% (95% confidence interval (CI), 7.4, 14.9), 2.2% (95%CI, 1.4, 3.7), and 1.9% (95%CI, 1.1, 3.2) of cattle, camel, and goats, respectively. Abortion was more commonly reported in camels (23.4%) than cattle (13.8%) and goats (12.4%). The results of this study suggested that Brucella infections contribute significantly to abortion in cattle (odds ratio (OR), = 4.7; 95%CI, 2.0, 10.8) and goats (OR = 6.9; 95%CI, 2.2, 21.7) but not in camels. The number of young animals produced by breeding females seems to be apparently reduced in seropositive groups. Keeping more than two animal species at household level was found to be the risk factor for cattle (OR = 3.1; 95%CI, 1.2, 7.9) and camel (OR = 5.3; 95%CI, 1.2–23.5) seropositivity to Brucella infection when compared to those animals from households that keep only two animal species. This may suggest a possibility of cross species transmission of Brucella infection under such mixed herding. Wet season (OR = 4.8; 95%CI, 1.3, 18.1) was found to be associated with seropositivity in goats, linked to a coincidence of increased deliveries in flocks with possible excretion of Brucella organisms. The study results suggest that Brucella infection is the likely cause of abortion in cattle and goats while other causes largely outweigh brucellosis as a cause of abortion in camels in Borana, hence, contributing to reproductive loss.     

Soil Test,Aerial Image and Yield Data as Inputs for Site-specific Fertility and Hybrid Management Under Maize

Several potential sources of information exist to support precision management of crop inputs. This study evaluated soil test data, bare-soil remote sensing imagery and yield monitor information for their potential contributions to precision management of maize (Zea mays L.). Data were collected from five farmer-managed fields in Central New York in 1999, 2000, and 2001. Geostatistical techniques were used to analyze the spatial structure of soil fertility (pH, P, K, NO₃ and organic matter content) and yield variables (yield, hybrid response and N fertilization response), while remote sensing imagery was processed using principal component analysis. Geographic information system (GIS) spatial data processing and correlation analyses were used to evaluate relationships in the data. Organic matter content, pH, P, and K were highly consistent over time and showed high to moderate levels of spatial autocorrelation, suggesting that grid soil sampling at 2.5–5.5ha scale may be used as a basis for defining fertility management zones. Soil nitrate levels were strongly influenced by seasonal weather conditions and showed low potential for site-specific N management. Aerial image data were correlated to soil organic matter content and in some cases to yield, mainly through the effect of drainage patterns. Aerial image data were not well correlated with soil fertility indicators, and therefore were not useful for defining fertility management zones. Yield response to hybrid selection and nitrogen fertilization rates were highly variable among years, and showed little justification for site-specific management. In conclusion, we recommend grid-based management of lime, P, and K, but no justification existed within our limited study area for site-specific N or hybrid management.     

The non-uniform phase structure in blend fiber. I. Non-uniform deformation of the dispersed phase in melt spinning

By melt spinning of incompatible polymer blends, the deformation of the dispersed phase was investigated in the fiber spinning process, for polypropylene/polystyrene (PP/PS) blend fiber and low density polyethylene/polyamide 6 (LDPE/PA6) blend fiber, respectively. Two kinds of the take-up fiber all exhibit the matrix fibrillar morphology, but with the opposite morphology. For PP/PS take-up fiber, the dispersed PS fibrils were finer in the core than near the surface. On the contrary, the dispersed PA6 fibrils were finer near the surface than in the core for LDPE/PA6 take-up fiber. However, for the special fiber in which the extensional flow was absent, there was the uniform morphology in either PP/PS or LDPE/PA6. Thus, fibrils’ non-uniform deformation, occurred in the drawing process, was considered to be due to the radial non-uniform processing conditions across the spin-line cross-section. The distribution of fibrils’ diameter was also investigated on the whole cross section. Rheological properties of each component were measured by the capillary rheometer. The non-uniform phase structure in blend fiber is a new phenomenon in the extensional flow.