Genetic variability within <Emphasis Type="Italic">Septoria carvi</Emphasis> Syd.- a pathogen of caraway <Emphasis Type="Italic">Carum carvi</Emphasis> L

Genetic variability within Septoria carvi isolates obtained from various organs of caraway cultivated in south-eastern and central Poland was studied using the RAPD-PCR technique. The tests were performed using randomly selected primers. The DNA profiles obtained using four primers proved useful in determining genetic variability among the genotypes of Septoria carvi isolates. The present study characterized the differences in the nucleotide sequence within the internal transcribed spacer region of rDNA (ITS1, 5.8S, ITS2) of selected S. carvi isolates and reference strains of Septoria spp. Moreover, eight isolates were sequenced for three loci: actin, calmodulin and translation elongation factor 1-alpha, and the obtained sequences were compared with the sequences of Septoria reference strains affecting other plants of the family Apiaceae. Phylogenetic analysis showed distinct differences of the tested isolates, which allowed to treat them Septoria carvi species affecting the above-ground organs of caraway Carum carvi L. This study is the first report on the genetic characteristics of the species S. carvi.     

Seasonal changes of mercury speciation in the coastal sediments

Purpose

Mercury speciation in sediments is linked to environmental conditions and processes. Domination of particular mercury species depends on its source, displays considerable seasonal behavior, and may be further modified due to oxygen levels, icing conditions, or the input of fresh organic matter. The purpose of this study was to examine the coastal area of the Gulf of Gdańsk in terms of mercury contamination and the influence of seasonal environmental changes on its speciation.

Materials and methods

In three highly dynamic coastal sites, mercury speciation in sediments was studied in relation to other environmental parameters (redox conditions, organic matter concentration, bacteria abundance, etc.). Sediment and water samples were collected monthly during a 3-year study. Sequential extraction of sediments was used for identification of four inorganic mercury species: dissolved, bound with fulvic and humic acids, mercury sulfide, and residual fraction. Cold vapor atomic fluorescence spectrometry (CV-AFS) was used for extracts and liquid sample analysis. Total mercury in sediments was measured with atomic absorption spectrometry (AAS). Changes in salinity were analyzed by measurements of chloride and sulfate ion concentrations using ion chromatography. Bacteria number and biomass were measured by direct counting using epifluorescence microscopy.

Results and discussion

Seasonal changes in mercury speciation were observed at all sites and attributed to different processes. Labile mercury fraction contribution varied from 0 to 80%. The speciation patterns varied locally as the stations selected for the study are diversified in terms of anthropogenic impact, water dynamics, and output from land. Mercury concentrations at all stations fluctuated during phytoplankton blooms, icing of marine waters, precipitation, or increased surface runoff from the land. In this local scale, the global climate changes are visible already as environmental conditions in studied area changed in comparison to elder research.

Conclusions

Obtained results suggest that although mercury emissions to the environment have decreased in recent years, local weather conditions, which may be intensified by climate change, seriously affect the bioavailability of past mercury deposits in coastal sediments.

     

Advocating a need for suitable breeding approaches to boost integrated pest management: a European perspective

Currently, European farmers do not have access to sufficient numbers and diversity of crop species/varieties. This prevents them from designing cropping systems more resilient to abiotic and biotic stresses. Crop diversification is a key lever to reduce pest (pathogens, animal pests and weeds) pressures at all spatial levels from fields to landscapes. In this context, plant breeding should consist of: (1) increased efforts in the development of new or minor crop varieties to foster diversity in cropping systems, and (2) focus on more resilient varieties showing local adaptation. This new breeding paradigm, called here ‘breeding for integrated pest management (IPM)’, may boost IPM through the development of cultivars with tolerance or resistance to key pests, with the goal of reducing reliance on conventional pesticides. At the same time, this paradigm has legal and practical implications for future breeding programs, including those targeting sustainable agricultural systems. By putting these issues into the context, this article presents the key outcomes of a questionnaire survey and experts' views expressed during an EU workshop entitled ‘Breeding for IPM in sustainable agricultural systems’. © 2017 Society of Chemical Industry     

Practical Applicability of Germination Index Assessed by Logistic Models

Sewage sludge management is a major challenge in environmental protection. Composting is an organic waste treatment method that is cost effective and leads to resource recovery. Composting is considered an environmentally and agriculturally friendly method of sewage sludge utilisation. The objective of this study was to evaluate maturity of three composts prepared on the basis of sewage sludge mixed with structure-forming waste materials, such as pine bark, sawdust and wheat straw. The germination index (GI) was used to assess the maturity and phytotoxicity of composts at particular composting stages (initial, mesophilic, thermophilic, cooling, maturation). Cress seeds were used to determine the GI. The logistic model, which belongs to a broad class of generalized linear models, was used to analyze experimental data. Using this model the interesting probabilities (from the point of view of the experimenter) for the occurrence of a specific root length were determined. In addition, a model was constructed providing a dependence of probability on temperature.

This work indicates a marked dependence between root length produced by cress seeds and the temperature of the composting process, which was closely related to the GI values. The longest plant roots, similarly as the highest GI values, were found at the lower temperature, which took place at the beginning and at the end of the composting process. Our findings suggest that the practical applicability of GI in the evaluation of compost maturity is limited. Additionally, the role of additional wastes being structure-forming agents in composted mixtures with sewage sludge was stressed as a sorption matrix for harmful substances released from sewage sludge.