A continuum of dead wood with various habitat elements maintains the diversity of wood-inhabiting fungi in an old-growth boreal forest

Evidence on habitat associations of threatened wood-inhabiting species in boreal forests may contribute to a better understanding of their ecology and conservation needs. We examined the diversity of wood-inhabiting fungal communities in an old-growth boreal forest with high substrate availability and continuity based on repeated surveys of fruit bodies. The number of species in morphological and functional groups in relation to coarse woody debris (CWD) attributes was estimated with generalized linear models. Additionally, we calculated species interaction networks of CWD attributes and fungal species. The composition of fungal communities was analysed using a non-metric multidimensional scaling with subsequent environmental fitting. Old conifer (especially spruce) logs and large aspen logs with branches represented the most important substrates for the red-listed species and the indicator species of old-growth boreal forests. Among “dynamic” CWD attributes such as time since tree death, decay class and stage of epixylic succession, the latter was the most important indicator of diversity of all species and their morphological and functional groups. The interaction network provided evidence of the importance of tree species diversity for fungal diversity. The composition of fungal communities was tree species specific and related to dynamic attributes, bark cover and diameter of logs. Our results suggest the importance of a continuum of dead wood from different tree species with a variety of niches such as branches, exposed wood, fragmented and complete cover of bark and patches of epixylic vegetation to maintain the assemblages of wood-inhabiting fungi in an old-growth boreal forest.     

Marine Fungal Cerebroside Flavuside B Protects HaCaT Keratinocytes against Staphylococcus aureus Induced Damage

Cerebrosides are glycosylated sphingolipids, and in mammals they contribute to the pro-/anti-inflammatory properties and innate antimicrobial activity of the skin and mucosal surfaces. Staphylococcus aureus infection can develop, not only from minor scratches of the skin, but this pathogen can also actively promote epithelial breach. The effect of cerebroside flavuside B from marine sediment-derived fungus Penicillium islandicum (Aniva Bay, the Sea of Okhotsk) on viability, apoptosis, total caspase activity, and cell cycle in human epidermal keratinocytes HaCaT line co-cultivated with S. aureus, as well as influence of flavuside B on LPS-treated HaCaT cells were studied. Influence of flavuside B on bacterial growth and biofilm formation of S. aureus and its effect on the enzymatic activity of sortase A was also investigated. It was found S. aureus co-cultivated with keratinocytes induces caspase-depended apoptosis and cell death, arrest cell cycle in the G0/G1 phase, and increases in cellular immune inflammation. Cerebroside flavuside B has demonstrated its antimicrobial and anti-inflammatory properties, substantially eliminating all the negative consequences caused by co-cultivation of keratinocytes with S. aureus or bacterial LPS. The dual action of flavuside B may be highly effective in the treatment of bacterial skin lesions and will be studied in the future in in vivo experiments.     

Carbon and nitrogen release from decomposing Scots pine,Norway spruce and silver birch stumps

Stumps are the largest coarse woody debris component in managed forests, but their role in nutrient cycling is poorly understood. We studied carbon (C) and nitrogen (N) dynamics in Scots pine (Pinus sylvestris), Norway spruce (Picea abies), and silver birch (Betula pendula) stumps, which had decomposed for 0, 5, 10, 20, 30 and 40 years after clear-cutting in southern Finland. Carbon and N were released significantly faster from birch stumps than from conifer stumps. In 40 years, conifer stumps lost 78% and birch stumps 90% of their initial C. In contrast, the amount of N in stumps increased, indicating that external N accumulated in the stumps. After 40 years of decomposition, the amount of N was 1.7 and 2.7 times higher than the initial amount in pine and spruce stumps, respectively. Nitrogen was released from birch stumps, but only after they had decomposed for 20 or more years. On average, 59% of N stored in birch stumps was released during 40 years. The results indicate that the stumps of the major tree species in Fennoscandian forests are long-term C and, especially, N pools which serve as N sinks, thus potentially diminishing N leaching into ground water and watercourses after harvesting. This suggests that the removal of stumps for bioenergy production may markedly affect the nutrient status and nutrient cycling of boreal forests.     

Lulworthinone: In Vitro Mode of Action Investigation of an Antibacterial Dimeric Naphthopyrone Isolated from a Marine Fungus

Treatment options for infections caused by antimicrobial-resistant bacteria are rendered ineffective, and drug alternatives are needed—either from new chemical classes or drugs with new modes of action. Historically, natural products have been important contributors to drug discovery. In a recent study, the dimeric naphthopyrone lulworthinone produced by an obligate marine fungus in the family Lulworthiaceae was discovered. The observed potent antibacterial activity against Gram-positive bacteria, including several clinical methicillin-resistant Staphylococcus aureus (MRSA) isolates, prompted this follow-up mode of action investigation. This paper aimed to characterize the antibacterial mode of action (MOA) of lulworthinone by combining in vitro assays, NMR experiments and microscopy. The results point to a MOA targeting the bacterial membrane, leading to improper cell division. Treatment with lulworthinone induced an upregulation of genes responding to cell envelope stress in Bacillus subtilis. Analysis of the membrane integrity and membrane potential indicated that lulworthinone targets the bacterial membrane without destroying it. This was supported by NMR experiments using artificial lipid bilayers. Fluorescence microscopy revealed that lulworthinone affects cell morphology and impedes the localization of the cell division protein FtsZ. Surface plasmon resonance and dynamic light scattering assays showed that this activity is linked with the compound‘s ability to form colloidal aggregates. Antibacterial agents acting at cell membranes are of special interest, as the development of bacterial resistance to such compounds is deemed more difficult to occur.     

Circle of life: the common hamster (Cricetus cricetus) adaptations to the urban environment

Traditionally, urbanization has been seen as a negative phenomenon for biota. However, changes in the environmental parameters induced by urbanization might be favorable for some species. Over the past half‐century, the common hamster has actively populated cities, establishing populations in some European, Russian and Kazakhstan cities. Based on integrative methods, we investigated free‐range common hamsters inhabiting Simferopol from 2015 to 2018 to reveal possible adaptations to the urbanized environment across several parameters, including lifespan, hibernation period, reproductive activity and body mass. Results show that in urban areas, the common hamster demonstrates an extremely short hibernation period compared to other localities, possibly due to enhanced food resources from urban forestry (walnuts, locus and hazelnut), allowing the species to start breeding very early (February) and finish as late as October. We present the first evidence of polyandry for this species: mating of receptive females with several males and subsequent confirmation of multiple paternity. Despite high reproductive potential, the lifespan of the common hamster in urban conditions is generally very short (less than 1 year). We speculate that in the process of synurbization, the common hamster's innate plasticity across many life history traits permits it to successfully colonize throughout a wide range of habitats, with the ability to form novel adaptations to urban environments.     

Comorbidity of ectopic thymoma-associated exfoliative dermatitis and pemphigus foliaceus in a cat

An 8-year-old cat was presented with pruritus, purulent paronychia, scaling, crusting, and spontaneous alopecia. Histopathology revealed intraepidermal neutrophilic pustular acantholytic dermatitis and hyperkeratotic cytotoxic interface dermatitis. No thoracic mass was seen on a lateral radiograph. Ectopic thymoma was discovered on necropsy. This case highlights the necessity for thorough investigation of any case of feline exfoliative dermatitis and pemphigus foliaceus for the presence of thymoma.Key clinical message:Comorbidity of exfoliative dermatitis and pemphigus foliaceus in a cat should prompt a thorough investigation for presence of a thymoma, possibly with advanced imaging techniques.     

Control of exciton fluxes in an excitonic integrated circuit

Efficient signal communication uses photons. Signal processing, however, uses an optically inactive medium, electrons. Therefore, an interconnection between electronic signal processing and optical communication is required at the integrated circuit level. We demonstrated control of exciton fluxes in an excitonic integrated circuit. The circuit consists of three exciton optoelectronic transistors and performs operations with exciton fluxes, such as directional switching and merging. Photons transform into excitons at the circuit input, and the excitons transform into photons at the circuit output. The exciton flux from the input to the output is controlled by a pattern of the electrode voltages. The direct coupling of photons, used in communication, to excitons, used as the device-operation medium, may lead to the development of efficient exciton-based optoelectronic devices.     

Phosphorus and base cation accumulation and release patterns in decomposing Scots pine,Norway spruce and silver birch stumps

Tree stumps are integral constituents of managed forest ecosystems, but their role in nutrient cycling is poorly understood. We studied phosphorus (P), potassium (K), calcium (Ca) and magnesium (Mg) dynamics in decomposing Scots pine (Pinus sylvestris), Norway spruce (Picea abies), and silver birch (Betula pendula) stumps in southern Finland in a chronosequence of 0-, 5-, 10-, 20-, 30- and 40-year-old clear-cut areas. Along with the decomposition of pine and spruce stumps, the amount of P in stumps increased, but K and Ca were released, and the amount of Mg initially decreased and then increased. All nutrients, except K, accumulated in birch stumps during the first ten years, but were released thereafter. After 40 years of decomposition, pine and spruce stumps contained 180% and 202% of their initial amounts of P, respectively. In addition, the amounts of Mg were larger than the initial amounts in 40-year decomposed pine (126%) and spruce (202%) stumps. In contrast, birch stumps lost 64% and 75%, respectively, of their initial amounts of P and Mg over a 40-year period. The stumps of all the species were found to release K and Ca. Pine, spruce and birch stumps lost 48%, 64% and 87% of their initial amount of K, and 49%, 35% and 42% of their initial amount of Ca, respectively, during the 40-year period. The results indicate that decomposing stumps of the major tree species in Fennoscandian forests are long-term nutrient pools and they serve as P sinks, thus potentially reducing P leaching after clear-cutting.     

Retrotransposon-based sequence-specific amplified polymorphism markers for the analysis of genetic diversity and phylogeny in <Emphasis Type="Italic">Malus</Emphasis> Mill. (Rosaceae)

Sequence-Specific Amplified Polymorphism (S-SAP)-analysis of 131 accessions of different species from five sections of the genus Malus was carried out to study genetic diversity, and to clarify phylogenetic and taxonomic issues. S-SAP-markers, based on long terminal repeat (LTR)-retrotransposons TRIM2 and dem1, were developed, which identified 679 polymorphic fragments in the studied Malus species. S-SAP technique proved to be effective for taxonomic studies in Malus. The obtained results generally support the existing sectional taxonomy in the genus Malus and allowed to determine the taxonomic status of some Russian landraces. The genetic diversity and taxonomic status of the Russian apple Antonovka landraces, widely used in breeding programs for their increased adaptation to abiotic stress and scab resistance, were clarified. All of them belong to M. domestica, section Malus. However, Antonovka Olginskaya might have a hybrid origin with some contribution from Gymnomeles species according to PCO analysis data. The taxonomic status was resolved for another Russian landrace, Yakutskaya, which exhibits increased winter hardiness and drought resistance; it belongs to section Gymnomeles, with a high resemblance to M. baccata.