Genotyping of infectious bronchitis viruses isolated in Japan during 2008−2019

Seventeen isolates of infectious bronchitis virus (IBV) were obtained from various prefectures of Japan during 2008–2019 and genetically analyzed. The IBV isolates were classified into six genetic groups, based on phylogenetic analysis of the S1 gene. The S1 genotypes were distinguishable by a newly developed restriction fragment length polymorphism (RFLP) method using three endonucleases, Hae II, Hpa I, and Fok I. Moreover, the isolates were classified into four genetic groups, based on phylogenetic analysis of the S2 gene. However, novel genetic groups based on a combination of S1 and S2 genotypes, which were undetected previously, were confirmed in this study, indicating that various recombinant IBV strains were prevalent in poultry in Japan.     

Molecular detection of filarial nematode parasites in Japanese black bears (Ursus thibetanus japonicus) from Iwate Prefecture, Japan

This study aimed to detect filarial parasites in blood samples of Japanese black bears (Ursus thibetanus japonicus) collected from Iwate Prefecture, Japan. Positive amplicons were obtained from 26 out of 30 samples by nested PCR targeting 18S ribosomal RNA gene and first internal transcribed spacer regions. DNA sequences of Mansonella sp. close to M. ozzardi and Dirofilaria sp. were detected for eight and 11 positive amplicons, respectively. Co-infection was detected for the remaining seven amplicons. Dirofilaria sp. was identified as D. ursi by further genetic analysis of 5S ribosomal RNA gene sequence. The results of this study will contribute to further investigations of Japanese black bears for monitoring their risk as a reservoir of possible zoonotic filarial parasites.     

A low body-color regulating ability of spotted halibut Verasper variegatus: Evaluation of the roles of melanin-concentrating hormone and proopiomelanocortin systems

In teleosts, melanin-concentrating hormone (MCH) induces body brightening. On the other hand, α-melanophore-stimulating hormone (α-MSH), derived from the precursor proopiomelanocortin (POMC), leads to body darkening. In many teleosts, the expression level of pmch is high in light backgrounds, while that of pomc is low in dark backgrounds. In the present study, we investigated the ability of spotted halibut Verasper variegatus to regulate body coloration. Intraperitoneal administration of MCH resulted in a dose-dependent brightening of body color. The body color and brain contents of pmch1 and pmch2 in spotted halibut acclimated to the black or white background were not almost affected by background color. In addition, pituitary mRNA levels of pomc-a, pomc-b, and pomc-c genes in fish acclimated to the white background often exceed those levels of fish kept under the black background. These results suggest that the weak response of expression levels of pmch genes in response to background color is a factor in the blunt ability of spotted halibut to regulate body color. The different profiles of pomc gene expression to background color compared to that reported in other teleosts may be another factor for the weak ability of body color change in the spotted halibut.

     

Impact of a 5-year winter cover crop rotational system on the molecular diversity of arbuscular mycorrhizal fungi colonizing roots of subsequent soybean

The impact of winter cover crops, specifically wheat (Triticum aestivum L.), red clover (Trifolium pratense L.), and rapeseed (Brassica napus L.) or winter fallow, on community composition of arbuscular mycorrhizal fungi (AMF) in subsequent soybean roots was investigated in a 5-year field trial on andosolic soils in Japan. Soybean roots were sampled at full-flowering and analyzed for AMF communities using a partial LSU rDNA region. Phylogenetic analysis detected 22 AMF phylotypes, including eight Glomus, three Gigaspora, two Scutellospora, three Acaulospora, two Rhizophagus, and one of Funneliformis, Diversispora, Paraglomus, and an unknown glomeromycete in the roots. The 5-year rotation of different winter cover crops or winter fallow did not impact the molecular diversity of AMF communities colonizing the roots of subsequent soybean. In all of the rotations, Glomus and Gigaspora phylotypes were common to soybean roots over the 5-year period. Redundancy analysis (RDA) demonstrated that AMF communities in the roots of subsequent soybean were not significantly different among winter cover crop rotations or fallow. However, AMF communities in soybean roots were clearly influenced by rotation year suggesting that climate or other environmental factors were more important than winter cover cropping system management.     

Abnormal morphology in megalopae of the swimming crab,Portunus trituberculatus during seed production: causes and prevention

The occurrence of morphologically immature megalopae, which retain zoeal features such as dorsal spines and furcae of telson, is closely correlated with larval mass mortality during seed production of the swimming crab Portunus trituberculatus in Japanese hatcheries. To determine the cause of immature megalopal morphology, zoeae were reared with various supplementary schedules and density of diets (rotifer, Artemia and phytoplanktons including Chlorella vulgaris and Nannochloropsis oculata). In addition, to assess the relationship between immature morphology and endocrine control, the effect of causative dietary factor was compared with the effect of eyestalk ablation at various timing during zoeal development. Megalopal immature morphology was more distinct in Chlorella‐supplemented groups than in Nannochloropsis‐supplemented groups. High density Chlorella supplementation was associated with the highest incidence of immaturity and resulted in larval mass mortality. The premoult of the third zoeal stage was identified as a critical period at which Chlorella supplementation led to the highest incidence of immaturity. This critical period coincided with the critical period at which larval metamorphosis was regulated by the eyestalk neurosecretory system. Our results suggested that the occurrence of immature megalopal morphology under culture conditions is most likely caused by phytoplankton (especially, Chlorella) supplementation, which disrupts the endocrine regulation. On the basis of our results, we successfully prevented the occurrence of immature megalopal morphology in 500 L tanks by excluding the influence of phytoplankton before the critical period (i.e. discontinuing phytoplankton supplementation and supplying rotifer cultured with non‐phytoplankton materials).     

纳米水雾环境对新鲜农产品采后贮藏过程中失重的调控

质量损失与冷害症状在新鲜农产品冷藏过程中经常发生,并会导致园艺产业巨大的经济损失。本试验分别研究了三种园艺产品,茄子(Solanum melongena)、日本芜青(Brassica rapa)和无花果(Ficus carica)在用两种类型加湿器制造的相对湿度为95%、温度分别为5.5℃和7℃的环境下贮藏10、6和8 d的贮藏品质。由纳米加湿器生成的水雾粒子平均直径小于100 nm,而由超声波加湿器生成的水雾粒子平均直径为216 nm。结果表明,纳米加湿器处理的日本芜菁、茄子和无花果样品的失重率分别为3.7%、5.3%和8.8%,超声波加湿器处理三种样品的失重率分别为7.3%、8.5%和14.7%。在纳米水雾贮藏室内放置的茄子果实的冷害指数要低于在超声波加湿环境中贮藏的果实。纳米水雾中的日本芜菁和无花果的气孔相比其初始状态下分别关闭了34.7μm2和51.5μm2,而在超声波水雾中则分别关闭了15.8μm2和25.5μm2。在纳米水雾中贮藏的日本芜菁的颜色要比在超声波水雾中贮藏的芫菁更绿。     

An evaluation of the growth-promoting effects of green light on spotted halibut for its practical application in aquaculture

Fisheries Science - We examined the effects of tank color and stocking density on the growth of spotted halibut (Verasper variegatus) under a green light-emitting diode (LED). Fish reared for...     

Effects of yield-related QTLs SPIKE and GPS in two indica rice genetic backgrounds

Recent progress in rice genomics has promoted the identification of quantitative trait loci (QTLs) associated with yield and its related traits. SPIKE, a QTL controlling spikelet number per panicle, and GPS, a QTL controlling leaf photosynthesis rate, were identical to NAL1. To assess the effect of SPIKE/GPS on yield potential, we compared DNA sequences of these alleles and conducted yield experiments in the field of Japan using the near-isogenic lines NIL-SPIKE (allele from Daringan in IR 64 genetic background), NIL-GPS (allele from Koshihikari in Takanari genetic background), and a chromosome segment substitution line, SL2115 (allele from Koshihikari in IR 64 genetic background). Despite the two SNPs in the promoter regions between Koshihikari and Daringan, both alleles were effective to increase the number of spikelets per panicle both in Takanari and IR 64 backgrounds. However, the extent of the increase was smaller and unstable in Takanari background than that in IR 64 background. In addition, SPIKE/GPS improved percentage of filled spikelets only in the IR 64 background. These results suggest that the effects of SPIKE/GPS alleles are similar but are affected by the difference of the genetic backgrounds. Because the increasing effect of spikelets number per panicle was canceled by the decrease of the number of panicles, which seems to be affected by environmental factors, none of NIL-SPIKE, SL2115, or NIL-GPS significantly out-yielded their parental cultivars. These results indicate the importance to consider genetic backgrounds and QTL-environment interaction toward the future use of SPIKE/GPS.