Characterization of volatiles and aroma-active compounds in honeybush (Cyclopia subternata) by GC-MS and GC-O analysis

Volatile organic compounds (VOCs) in fermented honeybush, Cyclopia subternata, were sampled by means of a high-capacity headspace sample enrichment probe (SEP) and analyzed by gas chromatography-mass spectrometry (GC-MS). Stereochemistry was determined by means of enantioselective GC-MS with derivatized β-cyclodextrin columns as chiral selectors. A total of 183 compounds, the majority of which are terpenoids (103; 56%), were identified by comparing their mass spectra and retention indices with those of reference compounds or tentatively identified by comparison with spectral library or literature data. Of these compounds, 37 were determined by gas chromatography-olfactometry (GC-O), using detection frequency (DF) and aroma extract dilution analysis (AEDA), to be odor-active (FD ≥ 2). (E)-β-Damascenone, (R/S)-linalool, (E)-β-damascone, geraniol, (E)-β-ionone, and (7E)-megastigma-5,7,9-trien-4-one were identified with the highest FD factors (≥512). The odors of certain compounds, that is, (6E,8Z)-megastigma-4,6,8-trien-3-one, (6E,8E)-megastigma-4,6,8-trien-3-one, (7E)-megastigma-5,7,9-trien-4-one, 10-epi-γ-eudesmol, epi-α-muurolol, and epi-α-cadinol, were perceived by GC-O assessors as typically honeybush-like.     

Aetiology of garlic rot,an emerging disease in France

The incidence of garlic rot has constantly increased in France since the early 2000s. To set up an efficient method of garlic protection against this disease, we have clarified its aetiology. This was achieved by surveying garlic from the two main French basins of garlic production over 3 years. Fungi were isolated from 5,493 garlic cloves belonging to pink, purple, and white garlic types. Sequencing of the translation elongation factor 1α gene of 1,171 strains revealed that 94% of the strains belonged to the species Fusarium proliferatum and 6% belonged to F. oxysporum. The pathogenicity of both species on garlic was confirmed by artificial inoculations and reisolations. There was significantly more F. oxysporum in garlic cloves with symptoms coming from the southeast basin (9.44%) than from the southwest basin (2.76%). This study confirms that garlic rot is present in pink, purple, and white types. However, pink type garlic harbours F. oxysporum significantly less frequently (1.59%) than white (9.39%) and purple (7.34%) types. Sequencing of rpb1, rpb2, ITS, and IGS regions of a subsample of strains revealed that there is little genetic diversity in the French population of F. proliferatum.     

Vitamin D status of 51-75-year-old Irish women: its determinants and impact on biochemical indices of bone turnover

OBJECTIVES: To assess the vitamin D status of Irish postmenopausal women during wintertime, and to examine its relationship with serum parathyroid hormone (PTH) and biochemical markers of bone turnover. In addition, the determinants of wintertime serum 25-hydroxyvitamin D (25OH-D) levels in these women were investigated. DESIGN: A cross-sectional observational study. SETTING: Cork City, Ireland (52 degrees N). SUBJECTS: Ninety-five apparently healthy, free-living postmenopausal women (aged 51-75 years), not taking any medication and free from any condition likely to affect vitamin D status or calcium/bone metabolism. RESULTS: Forty-eight per cent and 7% of women had serum 25OH-D levels <50 nmol l(-1) and <25 nmol l(-1), respectively. 25OH-D levels in these women were positively associated with dietary calcium intake (P = 0.0002) and use of vitamin D-containing supplements (P = 0.031), and negatively associated with cigarette smoking (P = 0.027) and body mass index (BMI) (P = 0.030). Low serum 25OH-D levels (<50 nmol l(-1)) were associated (P < 0.01) with elevated serum PTH levels. There were no significant differences in urinary pyridinium crosslinks or serum osteocalcin, biochemical indices of bone turnover, between subjects with serum 25OH-D levels above or below 50 nmol l(-1). CONCLUSION: A high proportion of Irish postmenopausal women had low vitamin D status (<50 nmol l(-1)) during late wintertime, which appeared to lead to elevated levels of serum PTH but not of bone turnover markers. Use of regular low-dose supplemental vitamin D, meeting daily calcium recommendations, cessation of smoking and maintaining BMI in the normal range are important factors that could help maintain adequate vitamin D levels during wintertime in these women.     

Biochemical and structural factors contributing to seasonal variation in the texture of farmed Atlantic halibut (Hippoglossus hippoglossus L.) flesh

Factors contributing to the texture of fish flesh, including pH, water content, density of fast muscle fibers, and the concentration of collagen and hydroxylysyl pyridinoline (PYD) cross-links, were investigated post-rigor in commercially farmed Atlantic halibut (Hippoglossus hippoglossus L.). The fish was sampled every quarter for a 12 month period from May 2004 to May 2005. Hydroxyproline (HYP) as a measure of collagen and PYD were determined using a high-performance liquid chromatography (HPLC) method. An ANCOVA model with fork length and season as covariates were used to explore the seasonal effects on texture, pH, muscle fiber density, alkaline-insoluble collagen (a-i HYP), alkaline-soluble collagen (a-s HYP), and PYD cross-links. A multiple linear regression (MLR) showed that the most important factors contributing to texture were PYD>water (%)>a-i HYP>fiber density, while pH and a-s HYP did not show any correlation to texture. The contribution of fast muscle fiber density to texture was found to vary between sexes and with the season, contributing more in males and in the spring. The most important parameter affecting texture was PYD, explaining 64% (p<0.001) of the total variation in a linear regression analysis. It is concluded that cross-linking processes are of great importance for the rigidity and strength of the collagen in Atlantic halibut flesh. Farmed halibut should be harvested in the fall or early winter when texture and nutrition are good to obtain optimal quality.     

Use of a commercially available culture system for diagnosis of Tritrichomonas foetus infection in cats

OBJECTIVE: To evaluate the efficacy of and optimize a commercially available culture system for sensitive and specific in-clinic culture of Tritrichomonas foetus from cat feces. DESIGN: Prospective study. SAMPLE POPULATION: Samples of freshly voided feces from 117 purebred cats and pure cultures of T. foetus obtained from a cat with chronic diarrhea. PROCEDURE: Optimal conditions for use of the culture system, such as quantity of fecal inoculum (0.025 to 0.2 g) and cultivation temperature (25 or 37 degrees C [98.6 or 77.0 degrees F]), were determined. Specificity of the system was examined by attempted culture of Giardia lamblia and Pentatrichomonas hominis. Sensitivity of the system to detect T. foetus was determined by inoculation of culture system pouches with serially diluted T. foetus suspensions with and without feces. RESULTS: Detection limit of the culture system was 1 and 1,000 T. foetus organisms without and with feces from cats, respectively. Optimal fecal inoculum was < 0.1 g of feces. At 37 degrees C, cultures yielded positive results in 24 hours; organisms remained viable for 1 to 6 days, and bacterial overgrowth was common. At 25 degrees C, cultures yielded positive results in 1 to 11 days; organisms were long-lived, and bacterial overgrowth was uncommon. Neither G. lamblia or P. hominis survived in the culture system. CONCLUSIONS AND CLINICAL RELEVANCE: The culture system was sensitive and specific for culture of T. foetus in feces of cats. Performance was optimal when test kits were inoculated with < or = 0.1 g of freshly voided feces and cultured at 25 degrees C.     

Revision of Dioncopseudobenedenia Yamaguti, 1965 including the description of D. ancoralis sp. n. (Monogenea: Capsalidae) from Pacific acanthuroid teleosts

Dioncopseudobenedenia Yamaguti, 1965 (Monogenea: Capsalidae) is redefined. Dioncopseudobenedenia kala Yamaguti, 1965 (type species) is redescribed from type material from Hawaii and from new specimens from Heron Island, Queensland, Australia and New Caledonia. We made detailed observations on D. macracantha Yamaguti, 1968 from type material from Hawaii, and from new material from Heron Island and New Caledonia. Dioncopseudobenedenia ancoralis sp. n. is described from the gill chamber of Siganus lineatus (Valenciennes) from Green Island and Heron Island, Australia and from New Caledonia. This study confirms that only one pair of large central sclerites is present on the haptor in Dioncopseudobenedenia species. The male copulatory organ in species of Dioncopseudobenedenia is a penis contained in a fluid-filled space (= penis canal) with weakly muscular walls. Dioncopseudobenedenia kala and D. ancoralis bear a sclerite at the tip of the penis. In D. macracantha, the structure of the penis, which has no terminal sclerite, indicates it may combine the functions of a penis and a cirrus. Dioncopseudobenedenia is compared with Calicobenedenia Kritsky et Fennessy, 1999, the other capsalid genus with a single pair of large sclerites on the haptor. The large haptoral sclerites in species of Dioncopseudobenedenia resemble accessory sclerites, whereas those of C. polyprioni Kritsky et Fennessy, 1999 resemble hamuli. Observations of oncomiracidia confirmed that the large haptoral sclerites in D. kala are accessory sclerites. Haptoral morphology suggests that different Dioncopseudobenedenia spp. employ different means of attachment. Mating behaviour was observed twice between two different pairs of D. kala specimens from Heron Island. Two preserved specimens from Nouméa, New Caledonia had structures near the dorsal vaginal pore that we interpret as spermatophores. This is the first report of spermatophores in a capsalid inhabiting the gill chamber. The geographic distribution of Dioncopseudobenedenia spp. is discussed.     

Helium Isotopic Evidence for a Lower Mantle Component in Depleted Archean Komatiite

Archean magnesium-rich komatiites require hot and presumably deep mantle sources, but their trace-element composition and radiogenic isotope composition are similar to those of modern mid-ocean ridge basalts, which originate in the upper mantle. The isotopic composition of helium extracted by sequential crushing of fresh olivines separated from two Archean and one mid-Proterozoic komatiites varies over three orders of magnitude, between a radiogenic end-member rich in helium-4 and a component rich in helium-3. Such helium-3 enrichment suggests the presence of a lower mantle component in Archean komatiites.     

Seasonal variations in the physical and chemical characteristics of ponds: implications for biodiversity conservation

• 1. The natural evolution of ponds leads to the filling up of these small ecosystems, and human intervention may sometimes be necessary to ensure their continued nature conservation interest.
• 2. In the arid karstic region of the ‘Causses du Quercy’ (France), there are numerous ponds bored into parts of the calcareous rock where water cannot percolate. Without human management they are destined to disappear, although they constitute the only available surface water resource on this limestone plateau.
• 3. Little information is available about the physical and chemical changes occurring as ponds go through different successional stages. A comparative study of three ponds at various stages of succession allowed an analysis to be made of the seasonal changes in a number of abiotic variables.
• 4. There was evidence that the temporal and spatial variability of abiotic factors (such as temperature, water level and dissolved oxygen concentrations) increased as ponds progressed through successional stages.
• 5. This study indicated that ponds varied in terms of plant and animal species richness and rarity, temperature, and oxygen concentration at different successional stages. Each pond supported a distinctive fauna. The results suggest that biotic diversity is, in part, driven by local‐scale physical and chemical heterogeneity. Management plans should be drawn at a scale that maintains the heterogeneity of such pond networks.

Copyright © 2004 John Wiley & Sons, Ltd.     

Selecting focal species for marine protected area network planning in the Scotia–Fundy region of Atlantic Canada

• 1. Focal species warrant conservation attention because they serve keystone, umbrella, indicator or flagship functions, and/or are sensitive or vulnerable to threats.
• 2. Defining critical habitat requirements for viable populations of focal species could provide important information for marine protected area (MPA) network design, as a complement to other considerations such as habitat representation.
• 3. A generally applicable approach for selecting focal species based on 20 characteristics that identify species as important in the community and/or susceptible to threats is presented with reference to the Scotia–Fundy region of Atlantic Canada.
• 4. Although a rigorous quantitative assessment of all local species against these characteristics is not included, several potential focal species are shown to possess many of the characteristics.
• 5. The North Atlantic right whale (Eubalaena glacialis) demonstrates flagship, umbrella and indicator characteristics, and is locally vulnerable to threats. Seasonally important feeding, nursery and socializing areas could be protected within a network of MPAs in the Scotia–Fundy region, which would concurrently protect sympatric species with smaller area requirements.
• 6. Cold‐water corals (i.e. Primnoa resedaeformis, Paragorgia arborea, Lophelia pertusa) possess keystone, indicator and flagship characteristics and are sensitive and vulnerable to local threats; thus, areas of high coral density and/or diversity could be protected within an MPA network, which would also help protect associated species.
• 7. These examples illustrate how consideration of the characteristics can help identify focal species and how their life requisites may be applied to MPA network design.
• 8. Rigorous quantitative assessment of all local species is required to select a comprehensive suite of focal species, and further research is needed to fill data gaps and confirm underlying hypotheses.
• 9. Nonetheless, focal species considerations show promise as a complement to other approaches to MPA network design and thus warrant further exploration in the Scotia–Fundy region and elsewhere.

Copyright © 2005 John Wiley & Sons, Ltd.     

Hidden neotropical diversity: greater than the sum of its parts

The diversity of tropical herbivorous insects has been explained as a direct function of plant species diversity. Testing that explanation, we reared 2857 flies from flowers and seeds of 24 species of plants from 34 neotropical sites. Samples yielded 52 morphologically similar species of flies and documented highly conserved patterns of specificity to host taxa and host parts. Widespread species of plants can support 13 species of flies. Within single populations of plants, we typically found one or more fly species specific to female flowers and multiple specialists on male flowers. We suggest that neotropical herbivorous insect diversity is not simply a function of plant taxonomic and architectural diversity, but also reflects the geographic distribution of hosts and the age and area of the neotropics.