Genetic and non-genetic factors influencing KLH binding natural antibodies and specific antibody response to Newcastle disease in Kenyan chicken populations

This study aimed at investigating the influence of genetic and non-genetic factors on immune traits to inform on possibilities of genetic improvement of disease resistance traits in local chicken of Kenya. Immune traits such as natural and specific antibodies are considered suitable indicators of an individual's health status and consequently, used as indicator traits of disease resistance. In this study, natural antibodies binding to Keyhole Limpet Hemocyanin (KLH-NAbs) was used to measure general disease resistance. Specific antibodies binding to Newcastle disease virus (NDV-IgG) post vaccination was used to measure specific disease resistance. Titers of KLH-NAbs isotypes (KLH-IgM, KLH-IgG and KLH-IgA) and NDV-IgG were measured in 1,540 chickens of different ages ranging from 12 to 56 weeks. A general linear model was fitted to determine the effect of sex, generation, population type, phylogenetic cluster, line, genotype and age on the antibody traits. A multivariate animal mixed model was fitted to estimate heritability and genetic correlations among the antibody traits. The model constituted of non-genetic factors found to have a significant influence on the antibody traits as fixed effects, and animal and residual effects as random variables. Overall mean (±SE) concentration levels for KLH-IgM, KLH-IgG, KLH-IgA and NDV-IgG were 10.33 ± 0.04, 9.08 ± 0.02, 6.00 ± 0.02 and 10.12 ± 0.03, respectively. Sex, generation and age (linear covariate) significantly (p < 0.05) influenced variation across all the antibody traits. Genotype effects (p < 0.05) were present in all antibody traits, apart from KLH-IgA. Interaction between generation and line was significant (p < 0.05) in KLH-IgM and NDV-IgG while nesting phylogenetic cluster within population significantly (p < 0.05) influenced all antibody traits, apart from KLH-IgA. Heritability estimates for KLH-IgM, KLH-IgG, KLH-IgA and NDV-IgG were 0.28 ± 0.08, 0.14 ± 0.06, 0.07 ± 0.04 and 0.31 ± 0.06, respectively. There were positive genetic correlations (0.40–0.61) among the KLH-NAbs while negative genetic correlations (−0.26 to −0.98) were observed between the KLH-NAbs and NDV-IgG. Results from this study indicate that non-genetic effects due to biological and environmental factors influence natural and specific antibodies and should be accounted for to reduce bias and improve accuracy when evaluating the traits. Subsequently, the moderate heritability estimates in KLH-IgM and NDV-IgG suggest selection possibilities for genetic improvement of general and specific immunity, respectively, and consequently disease resistance. However, the negative correlations between KLH-NAbs and NDV-IgG indicate the need to consider a suitable approach that can optimally combine both traits in a multiple trait selection strategies.     

Alfalfa (Medicago sativa L.) water use efficiency as affected by harvest traffic and soil compaction in a sandy loam soil

Summary Traffic during alfalfa harvest operations can cause soil compaction and damage to newly growing stems. Root exploration for soil water and nutrients, forage growth dynamics, and final yield can all be affected. The objectives of this study were to determine the long-term effects of harvest traffic and soil compaction on water-use efficiency (WUE) of alfalfa grown in a Wasco sandy loam (coarse-loamy, mixed, nonacid, thermic Typic Torriorthents). Alfalfa was planted into tilled soil and managed with or without harvest traffic. Plants subjected to traffic during harvest had a significantly lower WUE two out of the three years studied compared to plants that were never subject to traffic. The second experiment examined whether planting alfalfa into compacted soil and managed with or without harvest traffic altered WUE. Soil compaction had no affect on alfalfa WUE. It was significantly lower when grown in compacted soil and subjected to harvest traffic. It is suggested that the decrease in WUE caused by harvest traffic may be explained by plants allocating carbohydrates to damaged shoots and crowns instead of to above ground forage production. The area of the field affected by harvest traffic, which damages newly growing stems, should be minimized to increase crop water use efficiency.     

Design and evaluation of an irrigation system for creating water gradients under an automatic rain shelter

Summary This paper reports on the design and performance of an irrigation system associated with a rain shelter. The shelter is used in the closed position as a platform for multiple spray lines. This system automatically supplies, at a specified time, water of specified depth and delivery rate, either uniformly or on a specified gradient across the sheltered area. Variations in crop water deficits and yields have conformed closely to imposed water gradients.     

Simulation of the intake and partition of nutrients by the dairy cow: Part I — Management control in the dairy enterprise; philosophy and general model construction

The development of management control techniques for the dairy derd is discussed in this paper in relation to the rationale behind the construction of a detailed model of milk production in the individual cow. The movement towards a more flexible and individualised basis for predicting yield, which does not depend on historical records or standard energy systems, is highlighted.The overall concept and approach of the model are set out and the control aspects and structural framework of the program explained. Subsequent papers in the series will deal in more detail with the major sections of the program in order to illustrate how the mechanisms of the model actually operate and to provide results and an account of the validation procedure.     

Control of irrigation amounts using velocity and position of wetting front

A new approach for the estimation and control of the quantity of water applied in an irrigation is presented in which irrigation is stopped when the wetting front reaches a critical depth, Z _L. An expression for calculating the critical depth Z _L was developed. A major parameter in this expression is the velocity of advance of the wetting front, V, which was shown to be directly related to the application rate, IR, and inversely related to the initial soil water content, _i. A depth probe (patent pending) was designed, constructed and tested for the purpose of monitoring the position of the wetting front during infiltration and redistribution and for computing the value of V. Equations developed for relating the velocity of advance of the wetting front to _i as well as for estimating the value of the critical depth Z _L were successfully tested under conditions of uniform distribution of the initial soil water content. An iterative learning process which utilizes the real time output from the depth probe during each irrigation and is therefore capable of handling realistic field conditions where nonuniformity is the rule is presented. The acquired information is used to estimate a critical depth of the wetting front, Z _L, for a planned final wetted depth, Z _F, during each irrigation. This process is incorporated in the depth probe and is used to stop irrigation and thus control the quantity of water applied.     

Photosynthesis,plant growth and dry matter distribution in kiwifruit as influenced by water deficits

The effects of water deficits on photosynthesis, plant growth and dry matter accumulation and distribution in the kiwifruit, cv Hayward, grown under controlled conditions in the glasshouse were studied. Water stress was imposed by irrigating the plants with 100%, 85%, 65% and 40% of water needed to reach pot capacity in the soil. Water deficits reduced the rate of photosynthesis by up to 53–64% in relation to the control. This decline was attributed to stomatal closure, since stomatal conductance was reduced significantly, or/and to inhibition of photosynthesis at chloroplast level. Severe water stress reduced plant height by 78–84%, total dry weight by 58–66% and total leaf area by 72–77%. The root to shoot ratio was 3.5 times higher in water-stressed plants, showing that water stress in kiwifruit alters the pattern of dry matter distribution favouring the roots. The decrease in growth induced by water deficits was a consequence of a reduction in both photosynthesis and photosynthates partitioning, which adversely affects leaf area development.     

A model of decision-making and information flows for information-intensive agriculture

This paper describes the development of a systems based model to characterise farmers’ decision-making process in information-intensive practices, and its evaluation in the context of Precision Agriculture (PA). A participative methodology was developed in which farm managers decomposed their process of decision-making into brief decision statements along with associated information requirements. The methodology was first developed on a university research farm in Denmark and further revised during testing on a number of research and commercial farms in Indiana, USA. Twenty-one decision-analysis factors were identified to characterise a farm manager’s decision-making process. Then, a general data flow diagram (DFD) was constructed that describes the information flows “from data to decision”. Illustrative examples of the model in the form of DFDs are presented for a strategic, a tactical and an operational decision. The model was validated for a range of decisions related to operations by three university farm managers and by five commercial farmers practicing PA for cereal, corn and soybean production in Denmark and in Indiana, USA.     

Farmers' perception on self created water management rules in a pioneer scheme: The mula irrigation scheme, India

During the past two decades with farmer participation in irrigation management moving to center stage, the traditional view of having a centralized control over the water resources for better management has changed. Nevertheless, success of irrigation management transfer depend on a whole set of institutional arrangements or the rules-in-use and the willingness of the users to comply and enforce and/or change the rules in the light of changing circumstances. There are many institutional analyses of water sector, much of them touch on law, policy and administration, and characteristics of the users. The present paper is based on the study carried out to examine the institutional arrangements in one of the water users association that was first in the Maharashtra state. It focuses on the institutional arrangements governing water use and distribution and attempts to elicit the perceptions of the members regarding the rules-in-use. The findings reveal that the WUA has been successful in devising and enforcing the rules for water distribution, fee collection and conflict resolution for over a decade. However, current socio-economic developments such as political heterogeneity have required explicit conflict resolution mechanisms. These issues have now become issues demanding immediate attention and may be use of existing courts or legal institutions to help the WUA sustain in future.     

Combining deliberative and computer-based methods for multi-objective land-use planning

This paper reports the outcomes of a deliberative workshop comparing land-use plans proposed by land-manager or domain experts with those derived using a computer-based decision support system (DSS). The DSS integrates four main components, a geographic information system, land-use systems simulation models, impact assessments and land-use planning tools. The land-use planning tools draw on the other components to generate and evaluate alternative patterns of land use and management. Since the land-use planning tools are based on multi-objective genetic algorithms (mGAs) it is possible to generate a range of alternative plans that define the structure of the trade-off between the objectives. The workshop tasked the delegates with specifying land-use plans that achieved the best compromise between two objectives known to be non-commensurable and conflicting. The nature of the best compromise was dependent on their individual perspectives. The delegates proposed allocations both as individuals and in researcher-facilitated sub-groups. The mGA allocations were then compared with those derived by delegates and were found to be broadly similar in performance. Differences in the range of allocations considered feasible were explained by the hard and soft constraints on allocations agreed between the delegates and articulated within the workshop process. The hypothesis that part of the difference in performance between the mGA and delegate allocations was due to the delegates blocking together fields with the same land use for convenience of management was proved. The analysis of the group allocations revealed that the decision-making process had failed to improve on the individual allocations. From these results it was concluded that there was a potential role for mGA based land-use planning tools in researching into, and deliberating on, the possible impacts of policy or other factors affecting land-use systems. It was further concluded that the tools should not be used in isolation since there was the need for stake-holder inputs to adequately define the range of feasible and practical land-use plans.