The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease

Whole-genome sequencing of the protozoan pathogen Trypanosoma cruzi revealed that the diploid genome contains a predicted 22,570 proteins encoded by genes, of which 12,570 represent allelic pairs. Over 50% of the genome consists of repeated sequences, such as retrotransposons and genes for large families of surface molecules, which include trans-sialidases, mucins, gp63s, and a large novel family (>1300 copies) of mucin-associated surface protein (MASP) genes. Analyses of the T. cruzi, T. brucei, and Leishmania major (Tritryp) genomes imply differences from other eukaryotes in DNA repair and initiation of replication and reflect their unusual mitochondrial DNA. Although the Tritryp lack several classes of signaling molecules, their kinomes contain a large and diverse set of protein kinases and phosphatases; their size and diversity imply previously unknown interactions and regulatory processes, which may be targets for intervention.     

Characterization of a Unique “Super Soft” Kernel Trait in Wheat

Kernel texture in wheat (Triticum sp.) is central to end‐use quality and utilization. Here we report the discovery of a novel soft kernel trait in soft white winter wheat (T. aestivum L.). Two heritable kernel phenotypes were selected among F₃‐derived sibs, hereafter designated “normal soft” (wild‐type) and “super soft.” Normal soft lines exhibited single kernel characterization system (SKCS) hardness index (HI) values typical of soft wheat (HI ≈ 20), whereas the super soft lines were unusually soft (HI ≈ 5). Under some environments, individual super soft lines exhibited HI values as low as HI = –4. The super soft trait was manifested in reduced SKCS kernel texture and higher break flour yields, with some increase in sodium carbonate SRC (solvent retention capacity) values and sponge cake volumes. Straight‐grade flour yield, flour ash, milling score, and cookie diameter were largely unaffected. With the possible exception of the sodium carbonate SRC values, we observed no indication that the super soft trait conferred any negative aspects to commercial soft wheat quality. As such, the super soft trait may provide wheat breeders with new opportunities to modify the end‐use quality of wheat.     

An age-dependent association between a leptin C3469T single nucleotide polymorphism and intramuscular fat content in pigs

The objective of this work was to investigate whether the C3469T mutation at exon 3 of the pig leptin (Lep) gene is associated with fatness and if the magnitude and direction of these associations is consistent within age. Repeated measurements on body weight (BW), ultrasonic subcutaneous backfat (SB) and loin-muscle (LT) thickness, and intramuscular fat (IMF) content and composition were taken at 160, 180, 215 and 225 days of age on 162 Duroc barrows previously genotyped for the C3469T mutation. Plasma leptin concentration was determined at 180 days. A total of 505 records of IMF content and composition, which were determined both in live samples of longisimus dorsi muscle (LM) and in carcass samples of LM and gluteus medius muscle, were used in the analyses. The genotypic frequencies associated with the C3469T Lep mutation were 0.76, 0.23, and 0.01 for TT, TC, and CC genotypes, respectively. The effect of the Lep genotypes was assessed using a Bayesian approach based on a polynomial mixed model on age. No evidence was found for an association of the Lep genotypes neither with BW, SB thickness nor with plasma leptin concentration. The posterior mean of the difference TT–TC ranged, for LT, from 0.82 (160 days, posterior probability density (PP)> 0 of 87%) to 1.98 mm (220 days, PP > 0 of 96%) and, for IMF, from 0.96 (160 days, PP > 0 of 84%) to − 1.64 mg/g DM (220 days, PP > 0 of 2%). The results suggest an age-dependent association of the C3469T Lep polymorphism with LT and IMF, which may be useful to explain some controversial results in the literature concerning the association of this polymorphism with IMF content.     

地面平养蛋鸡就巢行为的遗传改善

在许多发达国家,存在着一种放弃利用传统鸡笼饲养蛋鸡的趋势,并且提供了替代型饲养系统及设施。如：散养系统（图1）、室内地面放养（图2）、大鸟笼式饲养系统（多层式地面平养禽舍）（图3）、改良式笼养系统（增设巢、沙浴和栖木等装置）（图4）。     

Phosphorus losses from two representative small catchments in the Mediterranean part of Spain

Purpose

Information about phosphorus (P) losses from agricultural catchments in Mediterranean environments is scarce. In this work, P losses in overland flow from two representative small Mediterranean catchments, one dominated by Alfisols and the other by Vertisols, were studied.

Materials and methods

At the lowest level of each catchment, overland flow was measured and several runoff samples taken in each runoff event during two growing seasons (2001–2002 and 2002–2003). After centrifugation, total P in sediments and total and molybdate reactive P in supernatant were determined. Different chemical extraction methods were used to quantify the forms of P in soils and sediments.

Results and discussion

Total P losses in the studied catchments ranged between 0.5 and 3.2 kg ha^?1 year^?1, losses higher than 2 kg P ha^?1 being observed in one event. Phosphorus was mainly lost in the sediments, the ratio of total dissolved P to particulate P being higher in the Alfisol than in the Vertisol catchment. Phosphorus concentration in sediments from the Vertisol catchment was similar to that in the source soils, whereas sediments in the Alfisol catchment had 2.1 times more inorganic P and 9 times more organic P (OP) than the source soils. In the latter catchment, there was an enrichment in the more labile inorganic P forms in the sediments relative to the source soils, which corresponds to a relative enrichment in iron (Fe) oxides by a factor of 2.4. Alfisols had lower TP contents and exhibited lower erosion rates than Vertisols in the studied period but they posed a greater environmental risk than the latter soils because their sediments were richer in P and had a higher proportion of P in forms bound to the Fe oxides compared to the source soils—these P forms can be easily released with the onset of reducing conditions at the bottom of waterbodies.

Conclusions

A study of the P enrichment ratios and the dominant P forms in eroded sediments is therefore necessary to predict the impact of P losses from soils on the ecological quality of waterbodies.     

Participation of silicon in cation‐anion balance as a possible mechanism for aluminum and iron tolerance in some gramineae

Abstract

Silicon (Si) has been suggested as a factor in aluminum (Al) tolerance of some species of the gramineae when grown on acid soils. Silicon concentrations are generally much higher in monocot plants than in dicot plants, and the phenomenon is related to the fact that mineral cation:mineral anion uptake ratio is much higher in dicots than in monocots. When large amounts of anionic Si, supposedly as sulfate (SO₄ ^4‐), participate in cation‐anion balance to add to the excess of anion uptake, equivalent amounts of hydroxyl ions should be expelled from roots which can increase rhizosphere pH and decrease uptake of Al and iron (Fe). The magnitude of OH^? released by roots for a 5000 kg/ha crop with an excess uptake of 1% Si can be equivalent to 357 kg lime per hectare. This could be very significant in decreasing Al and Fe uptake from acid soils when localized in the rhizosphere. Success of agriculture on highly acid soils may be enhanced by use in a rotation of crops and cultivars that have the ability to accumulate Si.     

Evaluation of the Physical–Chemical Characteristics of Wastewater After Disinfection with Peracetic Acid

Water, Air, &; Soil Pollution - The use of peracetic acid (PAA) in the disinfection of sanitary effluents has been proposed by various authors. However, there are still doubts about its...