A century of logging and forestry in a reindeer herding area in northern Sweden

Boreal forest ecosystems are generally highly sensitive to logging and other forestry activities. Thus, commercial forestry has had major effects on the forests and landscape structure in northern Sweden since the middle of the 19th Century, when it rapidly extended across the region. Lichens (which constitute up to 80% of reindeer forage in winter and early spring) have often been amongst the most severely affected ecosystem components. The overall aim of the present study was to analyze how forestry has influenced the potential supply of ground-growing lichens as winter forage for the reindeer in this region over the past ca. 100 years. For this purpose, we analysed changes in forest and stand structure in Scots pine-dominated (Pinus sylvestris L.) reindeer wintering areas in the southern part of the county Norrbotten (covering ca. 58,000 ha) using detailed historical forest inventories and management plans. We found that the amount of the forest types considered potentially good pasture (mainly middle-aged and old pine forests) decreased during the first part of the 20th Century. However, the quality of grazing grounds was improved by forestry during this time mainly because selective logging made the forests more open which benefits lichen growth. During the last part of the 20th century forestry impaired the quality of grazing grounds in several ways, e.g. by clear-cutting and intensified use of various silvicultural measures. We conclude that ca. 30–50% of the winter grazing grounds have been lost in the study area because of intensive forest management during the last century. The spatially precise historical information about the affects of forestry on lichen pasture provided in this study can be used to direct forest management which will facilitate and promote reindeer herding in the future.     

Physiological responses of ponderosa pine in western Montana to thinning, prescribed fire and burning season

Low-elevation ponderosa pine (Pinus ponderosa Dougl. ex. Laws.) forests of the northern Rocky Mountains historically experienced frequent low-intensity fires that maintained open uneven-aged stands. A century of fire exclusion has contributed to denser ponderosa pine forests with greater competition for resources, higher tree stress and greater risk of insect attack and stand-destroying fire. Active management intended to restore a semblance of the more sustainable historic stand structure and composition includes selective thinning and prescribed fire. However, little is known about the relative effects of these management practices on the physiological performance of ponderosa pine. We measured soil water and nitrogen availability, physiological performance and wood radial increment of second growth ponderosa pine trees at the Lick Creek Experimental Site in the Bitterroot National Forest, Montana, 8 and 9 years after the application of four treatments: thinning only; thinning followed by prescribed fire in the spring; thinning followed by prescribed fire in the fall; and untreated controls. Volumetric soil water content and resin capsule ammonium did not differ among treatments. Resin capsule nitrate in the control treatment was similar to that in all other treatments, although burned treatments had lower nitrate relative to the thinned-only treatment. Trees of similar size and canopy condition in the three thinned treatments (with and without fire) displayed higher leaf-area-based photosynthetic rate, stomatal conductance and mid-morning leaf water potential in June and July, and higher wood radial increment relative to trees in control units. Specific leaf area, mass-based leaf nitrogen content and carbon isotope discrimination did not vary among treatments. Our results suggest that, despite minimal differences in soil resource availability, trees in managed units where basal area was reduced had improved gas exchange and growth compared with trees in unmanaged units. Prescribed fire (either in the spring or in the fall) in addition to thinning, had no measurable effect on the mid-term physiological performance and wood growth of second growth ponderosa pine.     

Biological significance of RNA-seq and single-cell genomic research in woody plants

RNA-seq and single-cell genomic research emerge as an important research area in the recent years due to its ability to examine genetic information of any number of single cells in all living organisms.The knowledge gained from RNA-seq and single-cell genomic research will have a great impact in many aspects of plant biology.In this review,we summary and discuss the biological significance of RNA-seq and single-cell genomic research in plants including the single-cell DNA-sequencing,RNA-seq and single-cell RNA sequencing in woody plants,methods of RNA-seq and single-cell RNA-sequencing,single-cell RNA-sequencing for studying plant development,and single-cell RNA-sequencing for elucidating cell type composition.We will focus on RNA-seq and single-cell RNA sequencing in woody plants,understanding of plant development through single-cell RNAsequencing,and elucidation of cell type composition via single-cell RNA-sequencing.Information presented in this review will be helpful to increase our understanding of plant genomic research in a way with the power of plant single-cell RNA-sequencing analysis.     

Recovery of boreal forest structures near abandoned villages in Western White Sea Karelia,Russia

Regeneration of natural forest structures and dead wood has a key role in the long-term maintenance of biodiversity in most parts of the boreal zone. In order to obtain benchmarks for practical dead wood management rapidly, we utilised unintended historical experiments in land use by studying the recovery of forests surrounding abandoned villages along 2.5-km transects in NW Russia. The signs of past human forest use declined as a function of distance from villages. We found that the closest forests were 130 yr old or younger and contained very few elements typical of natural forests. Forests at a distance of between 1 and 1.5 km were older than 150 yr but showed marks of selective cuttings and had a less complete continuum of dead wood than forests that were 2–2.5 km from the villages. The most remote stands, which were generally older than 200 yr, predominantly had no signs of past forest use and had the most diverse dead wood composition. Our study shows that full recovery of the dead wood continuum in middle boreal forests is a slow process and also that less intensive past forest use can have a significant effect on the dead wood continuum.     

Applications and roles of the CRISPR system in genome editing of plants

Genome editing is a valuable tool to target specific DNA sequences for mutagenesis in the genomes of microbes, plants, and animals. Although different genome editing technologies are available, the clustered regularly interspaced short palindromic repeats/Cas9 (CRISPR/Cas9) system, which utilizes engineered endonucleases to generate a double-stranded DNA break (DSB) in the target DNA region and subsequently stimulates site-specific mutagenesis through DNA repair machineries, is emerging as a powerful genome editing tool for elucidating mechanisms of protection from plant viruses, plant disease resistance, and gene functions in basic and applied research. In this review, we provide an overview of recent advances in the CRISPR system associated genome editing in plants by focusing on application of this technology in model plants, crop plants, fruit plants, woody plants and grasses and discuss how genome editing associated with the CRISPR system can provide insights into genome modifications and functional genomics in plants.     

Proactive intervention to sustain high-elevation pine ecosystems threatened by white pine blister rust

Only recently have efforts begun to address how management might prepare currently healthy forests to affect the outcome of invasion by established non-native pests. Cronartium ribicola, the fungus that causes the disease white pine blister rust (WPBR), is among the introductions into North America where containment and eradication have failed; the disease continues to spread. Ecosystem function is impaired by high rust-caused mortality in mature five-needle white pine forests. This paper evaluates five proactive management options to mitigate the development of impacts caused by white pine blister rust in threatened remote high-elevation five-needle pine ecosystems of western North America. They are: reducing pest populations; managing forest composition; improving host vigor; introducing resistant stock with artificial regeneration; and diversifying age class structure to affect the natural selection process for resistance. Proactive intervention to manage and facilitate evolutionary change in the host species may sustain host populations and ecosystem function during pathogen naturalization.     

Past and predicted future effects of housing growth on open space conservation opportunity areas and habitat connectivity around National Wildlife Refuges

Context

Housing growth can alter suitability of matrix habitats around protected areas, strongly affecting movements of organisms and, consequently, threatening connectivity of protected area networks.

Objectives

Our goal was to quantify distribution and growth of housing around the U.S. Fish and Wildlife Service National Wildlife Refuge System. This is important information for conservation planning, particularly given promotion of habitat connectivity as a climate change adaptation measure.

Methods

We quantified housing growth from 1940 to 2000 and projected future growth to 2030 within three distances from refuges, identifying very low housing density open space, “opportunity areas” (contiguous areas with <6.17 houses/km²), both nationally and by USFWS administrative region. Additionally, we quantified number and area of habitat corridors within these opportunity areas in 2000.

Results

Our results indicated that the number and area of open space opportunity areas generally decreased with increasing distance from refuges and with the passage of time. Furthermore, total area in habitat corridors was much lower than in opportunity areas. In addition, the number of corridors sometimes exceeded number of opportunity areas as a result of habitat fragmentation, indicating corridors are likely vulnerable to land use change. Finally, regional differences were strong and indicated some refuges may have experienced so much housing growth already that they are effectively too isolated to adapt to climate change, while others may require extensive habitat restoration work.

Conclusions

Wildlife refuges are increasingly isolated by residential housing development, potentially constraining the movement of wildlife and, therefore, their ability to adapt to a changing climate.