Introgression of <Emphasis Type="Italic">Gossypium barbadense</Emphasis> L. into Upland cotton germplasm RMBUP-C4S1

Gossypium barbadense L. cotton has significantly better fiber quality than Upland cotton (G. hirsutum L.); however, yield and environmental adaptation of G. barbadense is not as wide as Upland. Most cotton in the world is planted to Upland cultivars. Many attempts have been made, over a considerable number of years, to introgress fiber quality alleles from G. barbadense into Upland. However, introgression barriers, primarily in the form of interspecific incompatibility, have limited these traditional approaches. The use of chromosome substitution lines (CSL) as a bridge should provide a more efficient way to introgress alleles from G. barbadense into Upland. We crossed 18 G. barbadense CSL to three cultivars and developed a random mated population. After five cycles of random mating followed by one generation of self-pollination to increase the seed supply, we grew the random mated population and used 139 G. barbadense chromosome specific SSR markers to assess a random sample of 96 plants for introgression. We recovered 121 of 139 marker loci among the 96 plants. The distribution of the G. barbadense alleles ranged from 10 to 28 alleles in each plant. Among the 96 plants we found individual plants with marker loci from 6 to 14 chromosomes or chromosome arms. Identity by descent showed little relatedness among plants and no population structure was indicated by a heat map. Using CSL we were able to develop a mostly Upland random mated population with considerable introgression of G. barbadense alleles which should be useful for breeding.     

Genetic variability and heterotic groups of Brazilian popcorn populations

The development of successful advanced lines and cultivars in maize is dependent on parental selection and assignment to defined heterotic groups. So, the objectives of this study were to evaluate genetic variability and identify heterotic groups among Brazilian popcorn varieties. Thus, diallel crosses of advanced generations of the popcorn hybrids, IAC 112 and Zélia, and of three open-pollinated popcorn varieties, RS 20, Branco, and SAM were performed. Ten hybrid combinations, the five parents, and five check treatments were arranged in a block design with four replicates in two tropical-zone locations (CWb climate). Both additive and non-additive effects were important for grain yield, plant height, ear height, and husk cover. For popping expansion, only the additive effects were important. Hybrid combinations between the local variety (Branco) and F₂ populations (IAC 112 and Zelia) resulted in the third and fourth highest values for popping expansion. The best grain yields were obtained with hybrid combinations involving SAM. Cultivars Zélia, IAC 112, and RS 20 increased popping expansion, whereas cultivar Branco increased grain yield of hybrid combinations. The following conclusions may be drawn: Brazilian popcorn populations have reduced heterosis and genetic variability to popping expansion in relation commercial cultivars; there is genetic variability among Brazilian popcorn populations that allows the exploitation of additive and non-additive effects for grain yield; it is possible to increase grain yield by using local varieties; but it would be difficult to obtain commercial hybrids from local varieties because they have poor performance for popping expansion.     

Genetic variation in F<Subscript>2</Subscript> populations and their potential in the improvement of grain yield in tef (<Emphasis Type="Italic">Eragrostis tef</Emphasis>)

Tef is a staple cereal of Ethiopia in high demand by consumers. In order to cope up with this high consumer demand, productivity per unit of land must increase through the development and use of high-yielding varieties. To this effect, the National Tef Research Project has long been striving towards the development of high yielding varieties through direct selection from germplasm and concentrating favourable alleles through hybridization and selection, despite the tedious crossing technique. The objective of this study was to assess the degree of genetic variation in F₂ populations of tef as a basis for improving grain yield. F₂ populations from 12 crosses and their parents were grown at the Debre Zeit Agricultural Research Center, Ethiopia, and assessment was made on eight traits on individual plant basis. Eleven of the 12 crosses showed substantial genetic variation for grain yield and its components, indicating the potential for improvement through selection. Moreover, grain yield, plant weight and yield related traits showed moderate to high heritability values (17–80%). In all the crosses, tiller number, panicle weight, yield per panicle and panicle length showed significant (P ≤ 0.05) and positive association with grain yield. Considering the degree of genetic variation and heritability values, emphasis should be given to selected crosses in an effort to developing high-yielding tef varieties.     

Identification of quantitative trait loci associated with resistance to foliar diseases in sorghum [<Emphasis Type="Italic">Sorghum bicolor</Emphasis> (L.) Moench]

Forage sorghum cultivars grown in India are susceptible to various foliar diseases, of which anthracnose, rust, zonate leaf spot, drechslera leaf blight and target leaf spot cause severe damage. We report here the quantitative trait loci (QTLs) conferring resistance to these foliar diseases. QTL analysis was undertaken using 168 F₇ recombinant inbred lines (RILs) of a cross between a female parental line 296B (resistant) and a germplasm accession IS18551 (susceptible). RILs and parents were evaluated in replicated field trials in two environments. A total of twelve QTLs for five foliar diseases on three sorghum linkage groups (SBI-03, SBI-04 and SBI-06) were detected, accounting for 6.9–44.9% phenotypic variance. The morphological marker Plant color (Plcor) was associated with most of the QTL across years and locations. The QTL information generated in this study will aid in the transfer of foliar disease resistance into elite susceptible sorghum breeding lines through marker-assisted selection.     

Location and transmission of QTL for multiple traits in the pedigree of soybean cultivars

In silico mapping for single trait was extended to analyze many agronomic traits in the pedigree of soybean. 26 agronomic traits were measured and 477 polymorphic markers chosen on public genetic map were genotyped on 14 inbreeding lines in the pedigree of Suinong14. We firstly determined 6 principal components from 26 agronomic traits using the principal component analysis and then constructed 6 “super traits” by the multiplication of the vector of the standardized original traits by the eigenvectors corresponding to the principle components. With in silico mapping, a total of 24 markers distributing on 13 linkage groups were detected separately as QTL responsible for 6 “super traits” and of which 14 QTL performed pleiotrpy. Tracing the transmission of functional genes in the pedigree, it was found that some genes were capable to explain the genetic mechanism for the contribution of exotic germplasms and domestic founders to soybean cultivars in the improvement of the performance and quality.     

Demand-driven breeding of food legumes for plant-nutrient relations in the tropics and the sub-tropics: serving the farmers; not the crops!

A number of improved cultivars of food legume crops have been developed and released in the tropics and the sub-tropics. Most of these cultivars have been developed through conventional breeding approaches based on the development of crop varieties under optimum soil fertility levels. Nevertheless, it is hardly possible to say that the varietal provisions made by the past approach have been readily accepted, and properly utilized to boost productivity of food legumes grown by resource-poor farmers. The approach itself did not fully appreciate the actual circumstances of the resource-poor farmers where marginal production systems prevail and the poorest farmers could not afford to use cultivars developed under optimum soil fertility level. Therefore, the limitations and strategic implications of past experiences made to develop crop cultivars need to be analyzed in order to formulate better strategies and approaches in the future. The main purpose of this article is to review the efforts made, the technical difficulties associated with the genetic improvement in food legumes as related to plant-nutrient relations, causes of limited breeding success and thereby draw lessons useful to designing future breeding strategies. The scope of nutrient deficiency stress and the approaches to breeding for plant-nutrient relations are discussed and the need for refining the approach and better targeting of the breeding methodologies suggested.     

Genome composition of ‘Elatior’-begonias hybrids analyzed by genomic in situ hybridisation

Interspecific hybridization of various tuberous Begonia species hybrids with Begonia socotrana results in so-called ‘Elatior’-begonias hybrids (B. × hiemalis Fotsch). In our study, genomic in situ hybridization (GISH) has been employed to assess the genome composition in eleven ‘Elatior’-begonias hybrids and their ancestor genotypes. Genomic DNA of tuberous Begonia was sonicated to 1–10-kb fragments, labelled by nick translation with digoxigenin-11-dUTP and used as a probe whereas B. socotrana DNA was autoclaved to 100 bp fragments and used as block. The genome of tuberous Begonia was clearly pronounced in ‘Elatior’-begonias when the probe concentration was ~3.75 ng/μl (150 ng/slide), with 30 times the excess of B. socotrana blocking DNA and stringency of post hybridization washings at 73% (0.1× SSC at 42°C). In ‘Elatior’-begonias hybrids GISH distinguished two groups comprising short (0.6–1.03 μm in length) and relatively longer chromosomes (1.87–3.88 μm) which represent B. socotrana and tuberous Begonia genomes, respectively. The number of chromosomes derived from tuberous Begonia ranged from 14 to 56 and for B. socotrana from 7 to 28 which suggest the presence of different ploidy levels in analyzed ‘Elatior’-begonia hybrids. Intergenomic recombination has not been detected through GISH in hybrids analyzed. Genomic in situ hybridization turned out to be useful to identify the genome constitution of ‘Elatior’-begonia hybrids and thus gain an insight into the origins of these cultivars. This knowledge on the ploidy level and genome composition is essential for further progress in breeding Begonias.     

Occurrence of aphid vector and genetic tolerance to infection by potyvirus in hot pepper

The productivity and marketable quality of hot pepper (Capsicum annuum var. annuum L.) are low in tropical regions mainly due to virus infections and lack of effective virus management strategies. The absence of effective virus management strategies could be attributed to lack of information on virus vectors and host resistance. Parental (P₁ and P₂) and progeny (F₁, B₁, B₂ and F₂) generations of five hot pepper crosses were grown in Ethiopia at three sites (Bako, Hawasa and Melkasa) to monitor number and species of potential aphid vectors, disease incidence levels with regards to natural infections by Potato virus Y (PVY) and Ethiopian pepper mottle virus (EPMV) complex, and to determine genetic tolerance of the crop to the viruses. Disease incidence was assessed before the flowering stage of the crop plants using visible disease symptoms due to infections by PVY and EPMV. The serological tests revealed presence of symptomless genotypes of the crop to the virus infections. Aphid species potentially transmitting the viruses, such as Acyrthosiphon pisum (Harris), Aphis fabae (Scopoli), and Myzus persicae (Sulzer), were identified from specimens caught by yellow water traps. The highest number of aphids from yellow water traps was recorded at a dense foliage growth stage of the crop at Melkasa. Highly significant variation was observed among generations of the five crosses in response to infections by PVY and EPMV complex. The most susceptible parents had the levels of disease incidences ranging from 80 to 90%, whereas their progenies had only below 30% incidence levels. The most tolerant parent remained symptomless to the natural infections of PVY- and EPMV-complex. Incidence levels in progenies of a cross from the most susceptible and tolerant parents remained below 20%. Based on serological test, the proportion of PVY-positive plants ranged from 0 to 75% and of EPMV-positive plants from 0 to 25%, with 0 to 17% co-infection by the two viruses. Availability of virus sources in the vicinity, efficiency of aphids in vectoring, weather conditions during the growth period, genetic tolerance and the growth stage of the crop affected natural infection by PVY- and EPMV-complex. Exploitation of the genetic potential of introduced elite genotypes and their progenies along with breeding elite local cultivars for resistance and excluding aphid vectors at young (seedling) stage of the crop plants could be helpful for minimizing losses in yield and quality of hot pepper due to infections by PVY- and EPMV-complex.     

Comparative study on growth and development of some accessions of local Germplasm of Bambara groundnut (<Emphasis Type="Italic">Vigna subterrenea</Emphasis> L. Verdc.) of Nigeria in two cropping seasons

Two field experiments were conducted in April (early cropping) and August, (late cropping) 2007 at the Department of Crop Science Research Farm, University of Nigeria, Nsukka, to evaluate the agronomic and yield attributes of 13 cultivars of bambara groundnut. The results obtained showed that planting dates had significant effects (P < 0.05) on all traits measured. Significant cultivar and cultivar x planting date interaction effects were observed for days to 50% flowering. The principal component analysis showed that the first three components accounted for 85.18 and 86.81% of the total variation in the early and late planting, respectively. The traits representing the cultivars along the first principal axis were number of pods per plant and seed weight per plant for the early planting and number of leaves per plant and seed weight per plant in the late planting. Cultivars were differentiated on the basis of number of flowers per plant and plant height for the early planting and days to emergence for the late planting along the second principal axis. The cluster plot revealed that the 13 bambara groundnut cultivars were grouped into three clusters at both the early and late planting dates. In the early planting, the cultivars in cluster I are associated with high number of flowers, number of pods, and plant height, while cluster II cultivars flowered earlier and had good pod and seed yield. However, cluster III cultivars performed poorly in all the traits evaluated. During the late planting, the cluster I comprised early flowering cultivars while cluster II comprised cultivars with good vegetative growth, high number of pods per plant and seed weight per plant. Cluster III cultivars are early emerging and early flowering but have poor seed yield. The correlation coefficient for seed weight per plant was highly significant and positive with number of leaves per plant, plant height, number of flowers per plant and number of pods per plant indicating that increase in these traits will ultimately increase seed weight per plant. Thus, these traits could be considered as major seed yield contributing traits that could be given significant recognition during selection.