Characterization of correlation between grain moisture and ear rot resistance in maize by QTL meta-analysis

Ear rot (ER) in maize is a prevalent disease worldwide which reduces yield and grain quality. Grain moisture content (GM) is an important factor which impacts the fungal development of ER species. Our purpose was to identify the genomic regions of maize in the control of GM and ER resistance, and the correlations between two traits. A meta-analysis was carried out using 241 quantitative trait loci (QTL) from 29 studies to propose meta-QTL (MQTL) on a high-density genetic linkage map (IBM 2 neighbors 2008). For GM content, 44 MQTL were identified on all chromosomes except for chromosome 9, while 29 MQTL were found for ER resistance, mainly located on chromosomes 3, 6 and 7. Moreover, 14 overlapping domains for GM MQTL and ER MQTL were observed on chromosomes 2, 3, 6 and 7, mainly focused on five active regions (bins 2.08–2.09, 3.04, 3.06, 6.04–6.06 and 7.03–7.03). There were 13 genes in the overlapping domain which could be divided into five classes: stress-related gene, photosystem-related gene, architecture-related gene, dynamic-related gene and seminal-related gene. It was possibly that the five-class genes were simultaneously related with GM and ER.     

Zinc fractions and solubility in a tropical semi-arid soil under long-term cultivation

There is an increasing incidence of Zn deficiency in savanna soil under intensive cultivation. The sizes of Zn pools and Zn²⁺ solubility were studied in a savanna soil under long-term cultivation and varying management practices which included fertilization with NPK, farmyard manure (FYM), NPK + FYM and a control which received neither NPK nor FYM for 50 years. An uncultivated natural site was sampled as a reference for assessing the effect of management history on Zn fractions and solubility. Total Zn ranged from 38 to 63 mg kg^-1 in the natural site, and from 28 to 57 mg kg^-1 in the cultivated fields. The FYM-fertilized field maintained total and extractable Zn on par with the natural site. Cultivation and management history did not affect the concentration of diethylenetriaminepentaacetic acid- (DTPA) extractable Zn, water-soluble Zn (SOL-Zn), exchangeable Zn (EXCH-Zn) and organically complexed Zn (OM-Zn). For the natural site, residual Zn (RES-Zn) accounted for 48% of total Zn, whereas Mn-oxide-bound Zn (MnOX-Zn) accounted for between 40% and 61% of total Zn in the cultivated fields. Cultivation caused the depletion of RES-Zn especially in FYM- and FYM + NPK-fertilized soils. Solubility studies indicated that some mechanism involving Zn and Fe, but independent of pH, appeared to control Zn²⁺ concentration in soil solution consistent with the reasonably constant values of pZn²⁺ + 2pFe³⁺ in soil solution.     

Effects of short-term conservation management practices on soil organic carbon fractions and microbial community composition under a rice-wheat rotation system

The objective of this study was to investigate the effects of short-term (less than 2 years) conservation managements [no-tillage (NT) and crop residue returning] on top soil (0–5 cm) microbial community composition and soil organic C (SOC) fractions under a rice-wheat rotation at Junchuan town of Hubei Province, China. Treatments were established following a split-plot design of a randomized complete block with tillage practices [conventional tillage (CT) and NT] as the main plot and residue returning level [no residue returning (0) and all residues returned to fields from the preceding crop (S, 2,146 kg C ha^?1)] as the subplots. The four treatments were CT with or without residue returning (CT0 and CTS) and NT with or without residue returning (NT0 and NTS). The abundances of microbial groups [total FLFAs, fungal biomass, bacterial biomass, fungal biomass/bacterial biomass (F/B), monounsaturated fatty acids/saturated fatty acids (MUFA/STFA), and microbial stress] were determined by phospholipid fatty acid (PLFA) analysis of soil. The ratio of MUFA/STFA reflects aeration of soil and greater MUFA/STFA means better aeration condition of soil. Moreover, the microbial stress, the ratio of cy19:0 to 18:1ω7, was regarded as an indicator of physiological or nutritional stress of microbial community. PLFA profiles were dominated by the fatty acids iC15:0 (9.8 %), C16:0 (16.5 %), 10Me17:0 (9.9 %), and Cyc19:0 (8.3 %), together accounting for 44.6 % of the total PLFAs. Compared with CT, NT significantly increased microbial biomass C (MBC) by 20.0 % but did not affect concentrations of total organic C (TOC), dissolved organic C (DOC), easily oxidizable C (EOC), and SOC of aggregates. Residue returning significantly increased MBC by 18.3 % and SOC content of 2–1-mm aggregate by 9.4 %. NT significantly increased total PLFAs by 9.8 % and fungal biomass by 40.8 % but decreased MUFA/STFA by 15.5 %. Residue returning significantly enhanced total PLFAs, bacterial biomass, fungal biomass, F/B, and MUFA/STFA by 31.1, 36.0, 95.9, 42.5, and 58.8 %, respectively, but decreased microbial stress by 45.9 %. Multivariate analysis (redundancy analysis and partial correlation analysis) indicated that SOC of 2–1-mm aggregate was related to changes in the composition of soil microbial groups, suggesting that SOC of 2–1-mm aggregate was sensitive to changes in soil microbial community composition affected by short-term conservation management practices in our study.     

Production Objectives and Management Strategies of Livestock Keepers in South-East Kenya: Implications for a Breeding Programme

A survey of pastoralist and agropastoralist households in south-east Kenya was conducted to determine their production objectives and management strategies in order to optimize and extend a breeding programme for indigenous small East African Shorthorn Zebu cattle. The reasons for keeping cattle and the breed/trait preferences identified reflect the multiple objectives of the livestock keepers, with both adaptive traits and productive/reproductive traits rated as important. Although the Maasai and Kamba zebu (M&KZ) breeds were ranked highly with regard to adaptive traits, the population is considered to have been in decline over recent years. In order to promote the conservation and sustainable use of the M&KZ cattle, the formation of an open nucleus breeding scheme is recommended. In particular, such a scheme would be able to address several existing constraints (e.g. individual herds are very small and communal use of pastures/water makes controlled mating difficult). Such interventions would require the full participation of the livestock keepers, as well as ensuring that a holistic approach to species and breed attributes is taken into account in setting breeding goals, such that the full array of contributions that livestock make to livelihoods and the genetic characteristics related to these contributions are fully incorporated into the programme.     

Immunotoxic responses of chronic exposure to cypermethrin in common carp

In the current study, laboratory evaluations were made to assess the immunomodulatory effect of cypermethrin on fingerlings of common carp (Cyprinus carpio L.). Results showed that 96-h LC50 of cypermethrin in common carp was estimated at 0.85 μg/L. Fish were exposed for 21 days to cypermethrin at three sub-lethal concentrations of 0.042, 0.085, and 0.17 μg/L that represented 5, 10, and 20%, respectively, of the 96-h LC50 of the pesticide for this fish species. Blood samples were taken after 7, 14, and 21 days of exposure. Immunological indices and resistance against bacterial infection were determined. Compared to the control group, the fish exposed to cypermethrin showed a significant increase in neutrophil ratio but exhibited a significant decrease in leukocyte number and lymphocyte ratio in treatments exposed to 0.17 and/or 0.085 μg/L after 21 days of exposure (p < 0.05). Serum protein level was significantly decreased in group exposed to 0.17 μg/L on day 14 and also in groups exposed to 0.085 and 0.17 μg/L on day 21 (p < 0.05). Immunoglobulin value was significantly reduced in groups exposed to 0.085 and 0.17 μg/L after 21 days of exposure (p < 0.05). Serum lysozyme activity and phagocytic activity were significantly decreased following exposure to 0.17 μg/L determined on days 14 and 21, post-exposure (p < 0.05). Mortality rate following the challenge with Aeromonas hydrophila significantly increased in fish exposed to 0.17 μg/L of cypermethrin. Overall, the present results indicate severe immunotoxicological effects of cypermethrin in common carp. Therefore, the use of cypermethrin in the proximities of common carp farms should be carefully considered.     

Plant interference and trial designs to study it in a glasshouse: a review

Silvicultural approaches at forest plantations with wider initial tree spacing have created potential for increased understory vegetation growth in response to increased light and greater nutrient resources. In consequence understory vegetation can fill a more important role in forest ecosystems, especially in interactions (competition or facilitation) between understorey vegetation and forests trees that might affect tree growth and nutrition. Considerable research has been carried out on plant interference. However, the experimental designs used in these studies vary from one study to another, and from species to species depending on the aims, objectives and practicalities of the studies. Thus there is no optimum design for competition experiments. This review discusses designs available in studying plant interferences in a glasshouse, particularly the effects of below-ground interaction of understorey vegetation and forest trees.     

An overview of the ongoing insights in selenium research and its role in fish nutrition and fish health

In the present review, the ongoing researches about selenium research in fish nutrition have been comprehensively discussed. Selenium research is getting popularity in fish nutrition as it is required for the normal growth and proper physiological and biochemical functions in fish. Its deficiency or surplus amounts create severe problems in fish. It is available as inorganic form, organic form, and nano form. In fish, most of the previous research is about the selenium requirements for fish by using only one selenium source mainly the inorganic one. Selenium shows maximum biological activity and bioavailability when it is supplied in proper form. However, to differentiate the more bioavailable and less toxic form of selenium, sufficient information is needed about the comparative bioavailability of different selenium forms in different fish species. In fish, important data about the new forms of selenoproteins is still scarce. Therefore, it is necessary to focus on the determination and elucidation of the new selenoproteins in fish through the utilization of recent approaches of molecular biology and proteomics. The adaptation of these new approaches will replace the old fashioned methodologies regarding the selenium research in fish nutrition. Moreover, the use of molecular biology and proteomics-based new approaches in combination with selenium research will help in optimizing the area of fish nutrition and will improve the feed intake, growth performance, and more importantly the flesh quality which has a promising importance in the consumer market.     

Spatial learning-induced <Emphasis Type="Italic">egr</Emphasis>-<Emphasis Type="Italic">1</Emphasis> expression in telencephalon of gold fish <Emphasis Type="Italic">Carassius auratus</Emphasis>

The immediate-early gene (egr-1) expression was used to examine the neuron’s response in telencephalon of goldfish during spatial learning in small space. Fishes were pre-exposed in the experimental apparatus and trained to pick food from the tray in a rectangular-shaped arena. The apparatus was divided into identical compartments comprising three gates to provide different spatial tasks. After the fish learned to pass through the gate one, two more gates were introduced one by one. Fish made more number of attempts and took longer time (P < 0.05) to pass through the first gate than the gate two or three. This active learning induces the expression of egr-1 in telencephalon as established by western blot analysis. Subsequently, the fish learn quickly to cross the similar type of second and third gate and make fewer errors with a corresponding decline in the level of egr-1 expression. As the fish learned to pass through all the three gates, third gate was replaced by modified gate three. Interestingly, the level of egr-1 expression increased again, when the fish exhibit a high exploratory behavior to cross the modified gate three. The present study shows that egr-1 expression is induced in the telencephalon of goldfish while intensively acquiring geometric spatial information to pass through the gates.     

Demonstration of primary cilia and acetylated α-tubulin in fish endothelial,epithelial and fibroblast cell lines

Primary cilia (PC) were demonstrated for the first time in fish endothelial, epithelial and fibroblast cell lines through immunofluorescence staining with the monoclonal antibody, 6-11B-1, against acetylated α-tubulin. The study was carried out with eight recently developed cell lines from the walleye, Sander vitreus (Mitchill). These were three fibroblast-like cell lines, WE-cfin11f, WE-skin11f and WE-liver3 from, respectively, the caudal fin, skin and liver, and three epithelial-like cell lines, WE-cfin11e, WE-spleen6 and WErpe from, respectively, the caudal fin, spleen and retina. Also, endothelial-like WEBA from the bulbus arteriosus and glial-like WE-brain5 from the brain were used. Immunocytochemistry revealed strong staining for acetylated α-tubulin in mitotic spindles and midbodies for all cell lines, and in PC for all cell lines except WE-skin11f. Staining of cytoplasmic microtubules (fibrils) was absent in three cell lines, including WEBA, but present in the others, especially WE-skin11f, which might have obscured PC detection in these cells. Tubacin, an inhibitor of histone deacetylase 6, induced cytoplasmic fibrils in WEBA and the intensity of their staining in WE-cfin11f. These results suggest that the cell lines might differ in their deacetylase activities, making them useful for studying this tubulin modification in teleosts, as well as for studying PC.     

Effect of inland water salinity on growth,feed conversion efficiency and intestinal enzyme activity in growing grey mullet, <Emphasis Type="Italic">Mugil cephalus</Emphasis> (Linn.): Field and laboratory studies

Two experiments were conducted to investigate the effect of inland water salinity on growth performance, feed conversion efficiency and intestinal enzyme activity in grey mullet. In experiment I, a 90 day monoculture of grey mullet at different salinity levels (0, 10, 15, 20 and 25%) was carried out. The fingerlings were stocked at 5000 per hectare and fed on a supplementary diet at 5% BW d^–1. This Study revealed that fish growth mean body weight (90.5 ± 4.5 g) and mean length (21.6 ± 0.4 cm), SGR (4.70%) and growth per day (0.99 g d^–1) were significantly (p < 0.05) enhanced in fish maintained at 10% salinity in comparison with other treatments. Nutrient levels, phytoplankton population, NPP and chlorophyll a all decreased with an increase in salinity (>10%). In addition, zooplankton populations increased with an increase in the salinity level. Most of the other hydrochemical characteristics remained at optimal levels in all other treatments. Fish weight gain showed a significant positive correlation with productivity indicating parameters viz. alkalinity (r = 0.53), turbidity (r = 0.62), NPP (r = 0.75) and chlorophyll a (r = 0.46), clearly revealing that fish growth is also related to the trophic status of the ponds. In the second experiment (Experiment II), mullet fry were exposed to five different salinity levels (10, 15, 20, 25 and 30%) and maintained for 70 days in the laboratory. Significantly (p < 0.05) high growth, (SGR and per cent increase in body weight), feed conversion efficiency and intestinal enzyme activity were observed in the group maintained at 10 salinity in comparison with other groups maintained at similar salinity levels. Carcass composition, musc1e and liver glycogen levels were also significantly (p < 0.05) affected by salinity changes.