Identification of diverse germplasm lines for agronomic traits in a chickpea (Cicer arietinum L.) core collection for use in crop improvement

Utilization of exotic and diverse germplasm is needed to enhance the genetic diversity of cultivars. Genetically diverse lines provide ample opportunity to create favorable gene combinations, and the probability of producing a unique genotype increases in proportion to the number of genes by which the parents differ. Representative core collections (10% of the entire collection) have been suggested as a means to identify useful parents for crop improvement programs. The chickpea core collection (1956 accessions) was evaluated for 14 agronomic traits in two seasons to identify diverse agronomically superior chickpea germplasm. Season (year) and genotypic effects were significant for 13 of the 14 traits, while genotype × season effect was significant for 8 traits. The desi, kabuli, and intermediate type chickpeas differed significantly for days to maturity, basal secondary branches, pods per plant, seed yield, and 100-seed weight. In comparison to controls, 12 accessions flowered early, 15 produced greater seed yield, and 29 had greater 100-seed weight. Based on days to 50% flowering, pods per plant, seed yield, and 100-seed weight, 19 desi, 15 kabuli and 5 intermediate type chickpea germplasm lines originating from 10 countries were selected. The selected desi accessions produced 8.5% more seed yield and had 32% larger seeds than the control cultivar Annigeri while the selected kabuli accessions yielded at par with control L 550 but had 84% larger seeds. The 39 selected accessions and two control cultivars (Annigeri and L 550) were grouped by their first five principal components (PCs) into three clusters. Cluster 1 consisted of early maturing large-seeded kabuli types, cluster 2 early and late maturing desi types, and cluster 3 late maturing intermediate and kabuli types. Clusters 2 and 3 accessions had small to medium sized seeds. These accessions can be used in chickpea breeding programs to develop high yielding desi and kabuli cultivars with a broad genetic base.     

Characterisation and epitope mapping of neutralising monoclonal antibodies to A24 Cruzeiro strain of FMDV

Characterisation of seven neutralising monoclonal antibodies (mAbs) produced against foot-and-mouth disease virus A(24) Cruzeiro revealed three reactivity groups. Gr-I recognised linear epitopes where as Gr-II was conformation-dependent and trypsin-insensitive. The Gr-III was also conformation-dependent, but trypsin-sensitive. Mar (mAb neutralisation resistant)-mutants could only be produced against Gr-I and Gr-III mAbs. Capsid sequence comparison of Gr-I mar-mutants with parent virus revealed changes in the G-H loop of VP1 at positions 141, 143 and 147. Similarly, a Gr-III mar-mutant showed a change from a highly conserved glycine to a tryptophan at position 148 of VP1 along with three additional changes at the N-terminus of VP1, VP2 and VP4. This residue at 148 of VP1 is located at +2 position after "RGD" and is equivalent to the position identified by the mAb recognising site 5 in serotype O viruses. This site is probably formed because of the interaction of the G-H loop with other residues in different structural proteins.     

Molecular approaches for enhancing sweetness in fruits and vegetables

The quality of fruits and vegetables is mainly dependant on the sweetness determined by the level of soluble sugars such as glucose, fructose and sucrose. Other fruit quality parameters include Brix content, acidity, aroma, color, size and shape. Total sugar content in fruits and vegetables is a function of genetic, nutritional, environmental and developmental factors. Understanding the factors controlling sweetness is important to design strategies for enhancing quality of fruits and vegetables. Modifying the activity of enzymes in carbohydrate metabolism such as sucrose synthase (SuSy), acid invertase, ADP-glucose pyrophosphorylase (AGPase), sucrose phosphate synthase (SPS) and sucrose transporters were found to influence carbohydrate partitioning and sucrose accumulation in sink tissues of several food crops. Plant based taste-modifying sweet proteins such as brazzein, cucurmin, mabinlin, monellin, miraculin, neoculin and thaumatin have potential application for developing transgenic plants to improve the sweetness and quality of fruits and vegetables. The present review envisages various cultural, breeding and molecular approaches used for enhancing sugar content and sweetness in fruits and vegetables.     

Characterization of groundnut (Arachis hypogaea L.) collection using quantitative and qualitative traits in the Mediterranean Basin

This study was conducted to determine the genetic diversity and relationship among 256 groundnut genotypes of which 132 belong to subsp. hypogaea (Arachis hypogaea L.) and 124 to subsp. fastigiata (Arachis fastigiata L.). The collection was evaluated for eight quantitative and five qualitative traits during three consecutive years under Mediterranean climate conditions. Coefficient of variation (CV) significantly differed among the genotypes for all the studied quantitative traits ranged from 9.10 to 33.98%, while the highest CV was recorded for seed yield. The subspecies of hypogaea and fastigiata displayed significant differences for quantitative traits except for numbers of pods per plant and seed yield. Principal component analyses showed that the first three principal components accounted for 68.14% variation for quantitative traits. Major traits that accounted for the variation by the three principal components (PCs) include days to the first flowering, days to 50% flowering, number of pods per plant and shelling percentage. The groundnut collection also offers wide seed coat color diversity which affects the crop marketability. The information on variations in quantitative and qualitative traits identified in the present investigation provided useful genotypes which would be serving parents. These parental genotypes can be used in groundnut breeding programs to develop desirable cultivars in Mediterranean Basin and globally.     

Optimal placement of proximal sensors for precision irrigation in tree crops

Precision Agriculture - Soil water or plant water status-based precision irrigation has the potential to improve water productivity. In this study, the question of number as well as placement of...     

Prediction of plant water status in almond and walnut trees using a continuous leaf monitoring system

Persistent drought conditions in the Central valley of California demands efficient irrigation scheduling tools such as precision or variable rate irrigation (VRI). To assist VRI scheduling, an experiment was conducted in almond and walnut orchards using a sensor system called ‘leaf monitor’, which was developed at UC Davis to detect plant water status. A Modified Crop Water Stress Index (MCWSI) was calculated to quantify plant water status using leaf temperature and environmental data collected by the leaf monitor. This technique also took into account spatio-temporal variability of plant water status. Stem water potential (SWP), which is considered a standard method for determining plant water stress (PWS), was also measured simultaneously. Relationships between measured deficit stem water potential (DSWP), which is the difference between SWP and the saturated baseline, and MCWSI were developed for both crops based on data collected during the 2013 and 2014 growing seasons. A linear relationship was found in the case of walnut crop with a coefficient of determination (r²) value of 0.67. A quadratic relationship was found in the case of almonds with a coefficient of multiple determination (R²) value of 0.75. Moreover, these results highlighted that at lower PWS of below 0.5 MPa of DSWP, almonds crops did not show any decrease in transpiration rate. However, when the stress level exceeded 0.5 MPa of DSWP, transpiration rate tended to decrease. On the other hand, walnut crop showed decrease in transpiration rate even at low PWS of below 0.5 MPa of DSWP. Temporal variability was noticed in PWS as it was found that coefficients of saturation baseline used for MCWSI method changed significantly throughout the season. MCWSI values estimated before an irrigation event was used to calculate the irrigation amount for low frequency variable rate irrigation (VRI) based on the relationship found between MCWSI and DSWP, and VRI led to an average 39% reduction in water usage as compared to the fixed 100% ET replacement irrigation method for all trees. Based on the results, leaf monitor showed potential for use as an irrigation scheduling tool.

     

A NIR Technique for Rapid Determination of Soil Mineral Nitrogen

The objective of this investigation is to determine the possibility of rapidly sensing soil mineral-N content using near infrared (NIR) reflectance. Simulation studies were conducted to determine the ability of Partial Least Squares (PLS) and Principal Components Regression (PCR) techniques to relate NIR spectral data to soil nitrate content in the presence of interfering effects and experimental noise. The simulation studies revealed that both PLS and PCR techniques were quite robust in predicting soil nitrate content provided the calibration set included the same interfering effects. These techniques failed completely if the prediction set contained interfering effects which were not included in the calibration set. This implies that a site-specific calibration is necessary for this technique to work successfully. Laboratory tests using Yolo loam and Capay clay soil samples as well as verification tests using field soils (Yolo loam and Capay clay) mixed with nitrogen fertilizer indicated that soil mineral-N content can be determined using the NIR technique provided site-specific calibration is used.