Degradation of scrapie associated prion protein (PrPSc) by the gastrointestinal microbiota of cattle

A food-borne origin of the transmission of bovine spongiform encephalopathy (BSE) to cattle is commonly assumed. However, the fate of infectious prion protein during polygastric digestion remains unclear. It is unknown at present, whether infectious prion proteins, considered to be very stable, are degraded or inactivated by microbial processes in the gastrointestinal tract of cattle. In this study, rumen and colon contents from healthy cattle, taken immediately after slaughter, were used to assess the ability of these microbial consortia to degrade PrP(Sc). Therefore, the consortia were incubated with brain homogenates of scrapie (strain 263K) infected hamsters under physiological anaerobic conditions at 37 degrees C. Within 20 h, PrP(Sc) was digested both with ruminal and colonic microbiota up to immunochemically undetectable levels. Especially polymyxin resistant (mainly gram-positive) bacteria expressed PrP(Sc) degrading activity. These data demonstrate the ability of bovine gastrointestinal microbiota to degrade PrP(Sc) during digestion.     

Visualising the premature brain using 17.6 Tesla magnetic resonance imaging

The aim of this study was to evaluate the ability of a 17.6 Tesla magnetic resonance (MR) microscope to determine external and internal structures and three-dimensional (3D) volume rendering of premature bovine brain tissue. Two bovine embryos (Carnegie-stages 16 and 21) were examined. 3D magnetic resonance imaging (MRI) was performed with a high field MR-scanner at a field strength of 17.6 Tesla. Images with isotropic nominal resolutions up to 39.1 μm were acquired. The MR images corresponded very well with histological slices. 3D virtual models of the embryonic brain were easily produced in a relatively short time and the high field scanner provided highly detailed images of formalin fixed brain tissue. Manual segmentation and automatic volume rendering is a valuable tool for the fast generation of 3D brain models and, to some degree, can replace conventional techniques in comparative embryology.     

Characterization of local and peripheral immune system in pregnant and nonpregnant ewes

Modulation of the immune system is known to be important for successful pregnancy but how immune function might differ between the lymph nodes draining the reproductive tract and peripheral lymph nodes is not well understood. Additionally, if immune system changes in response to the presence of an embryo during early pregnancy, and if this response differs in local versus peripheral immune tissue, has not been well characterized. To address these questions, we examined expression of genes important for immune function using NanoString technology in the ampulla and isthmus of the oviduct, endometrium, lymph nodes draining the reproductive tract (lumbo-aortic and medial iliac) as well as a peripheral lymph node (axillary), the spleen, and circulating immune cells from ewes on day 5 of the estrous cycle or pregnancy. Concentrations of estradiol and progesterone in plasma were also determined. Principal component analysis revealed separation of the local from the peripheral lymph nodes (MANOVA P = 3.245e-08, R² = 0.3) as well as separation of tissues from pregnant and nonpregnant animals [lymph nodes (MANOVA P = 2.337e-09, R² = 0.5), reproductive tissues (MANOVA P = 2.417e-14, R² = 0.47)]. Nine genes were differentially (FDR < 0.10) expressed between lymph node types, with clear difference in expression of these genes between the lumbo-aortic and axillary lymph nodes. Expression of these genes in the medial iliac lymph node was not consistently different to either the axillary or the lumbo-aortic lymph node. Expression of IL10RB was increased (FDR < 0.05) by 24% in the reproductive tissue of the pregnant animals compared to nonpregnant animals. Analysis of gene categories revealed that expression of genes of the T-cell receptor pathway in reproductive tract tissues was associated (P < 0.05) with pregnancy status. In conclusion, assessment of gene expression of reproductive and immune tissue provides evidence for a specialization of the local immune system around the reproductive tract potentially important for successful establishment of pregnancy. Additionally, differences in gene expression patterns in reproductive tissue from pregnant and nonpregnant animals could be discerned as early as day 5 of pregnancy. This was found to be associated with expression of genes important for T-cell function and thus highlights the important role of these cells in early pregnancy.     

Field investigations of soil hydrological properties of fen soils in North‐East Germany

To investigate the changes of hydrological properties of peat soil in course of soil development, field measurements at 84 fen sites (Histosols) in 19 fen regions of North‐East Germany were carried out. Capillary water supply at all the stages of soil development was not limited up to 70 cm of ground water level. Worsening of plant water supply was the result of mud accumulation in the capillary fringe, ground water levels located deeper than 70 cm below soil surface, low hydraulic conductivity in the ground water zone, and hysteresis effects, affected by high dynamics of ground water level during the day.     

Bestimmung von nichtaustauschbarem Ammonium in Böden mit einer Halbmikromethode

Determination of non exchangeable Ammonia in Soils by a semicro method A semi-micro version (sample weight 0,1 g) for the determination of nonexchangeable NH₄⁺ of soils, based on the method of Silva and Bremner (1966) is described. The results of the semi-micro version are compared with the original method. The regression-coefficient is r = 0,9906. Analysis time is reduced by a factor of 2, reagent needs approximately by a factor of 20. Exactness and reproducibility are satisfactory for routine measurements. Pampean soils from Argentina, analyzed with the semi-micro method contain between 50 and 90 ppm nonexchangeable NH₄⁺.     

RAPD analysis of genetic relationships of seven flax species in the genus Linum L

The wild progenitor of the cultivated flax (Linumusitatissimum L.) has been long hypothesized to beL. angustifolium Huds., largely fromseveral phytogeographic cytogenetic and phenotypic studies, but no molecularstudies on the issue are found. In this study, we genotyped 12 flax accessionsrepresenting seven flax species in the genus Linum with 527RAPD loci from 29 informative RAPD primers and analyzed their geneticrelationships with simple matching, Dice's and Jaccard's similaritycoefficients. Large RAPD variations were found among the flax species.L. usitatissimum andL. angustifolium had a higher RAPDsimilarity than the other pairs of flax species and these two species wereconsistently clustered in the same group with all of the similarity coefficientsused. This molecular finding provides an additional support for the hypothesisof L. angustifolium as the wildprogenitor of cultivated flax.     

Estimating microbial biomass N in soils with and without living roots: Limitations of a pre-extraction step

Special net-closed soil containers were used in a pot experiment with low and high plant densities to give soil samples with and without roots. Soils from the containers were analysed either by the fumigation-extraction method or by a modified procedure starting with a pre-extraction and sieving step to remove plant roots from the samples. In the extracts NO ₃ ^- -N, NH ₄ ⁺ -N, organic N, and total N were measured. Microbial biomass N was calculated from the differences in total N in fumigated and unfumigated soils. Different plant densities had almost no influence on the values of the N compounds using either method. In soils with roots, significantly more organic N (and total N) was found by the fumigation-extraction method compared to soils without roots while no differences were obtained using pre-extractions and sieving. Though the organic N content in pre-extracts from soils with roots was significantly higher than from soils without roots, the NO ₃ ^- -N and NH ₄ ⁺ -N content was lower. Significant differences in biomass N in soils with and without roots were found only with the fumigation-extraction method. Biomass N levels calculated using the results after pre-extraction and sieving were about 50% lower than levels detected using fumigation-extraction alone. With the use of special net-closed soil containers, not only were soil samples produced with and without roots, but it was also possible to induce a rhizophere in the soils. A comparison of the two methods using these soils clearly demonstrated that the method used has profound influence on the final biomass N results. While higher biomass levels were found by fumigation-extraction in soils with roots, because root N becomes extractable after fumigation, the use of a pre-extraction and a sieving step may underestimate the total biomass N content due to the pre-extraction of microbial N (especially from rhizosphere microorganisms) from the sample. Nevertheless, pre-extraction and sieving followed by fumigation-extraction does seem to be the preferable method for biomass N measurement in comparative studies, because in most cases only minor errors will occur.