Infectivity of scrapie prion protein (PrPSc) following in vitro digestion with bovine gastrointestinal microbiota

The influence of a complex microflora residing in the gastrointestinal tract of cattle on the prion protein plays a crucial role with respect to early pathogenesis and the potential infectivity of faeces resulting in contamination of the environment. It is unknown whether infectious prion proteins, considered to be very stable, are inactivated by microbial processes in the gastrointestinal tract of animals during digestion. In our previous study it was shown that the scrapie-associated prion protein was degraded by ruminal and colonic microbiota of cattle, as indicated by a loss of anti-prion antibody 3F4 immunoreactivity in Western blot. Subsequently, in this study hamster bioassays with the pre-treated samples were performed. Although the PrP(Sc) signal was reduced up to immunochemically undetectable levels within 40 h of pre-treatment, significant residual prion infectivity was retained after degradation of infected hamster brain through the gastrointestinal microflora of cattle. The data presented here show that the loss of anti-prion antibody 3F4 immunoreactivity is obviously not correlated with a biological inactivation of PrP(Sc). These results highlight the deficiency of using Western blot in transmissible spongiform encephalopathies inactivation assessment studies and, additionally, point to the possibility of environmental contamination with faeces containing PrP(Sc) following an oral ingestion of prions.     

The phosphorus status of German cropland—An inventory of top‐ and subsoils

Background : In search for more sustainable crop production, the subsoil has recently come into focus as considerable reservoir of nutrients and water. Aims : Dimensions of subsoil phosphorus (P) reserves are yet largely unknown but crucial for identifying regions suitable to include subsoil into sustainable management strategies. Methods : We analyzed stocks of total and plant‐available (calcium acetate lactate‐extractable) P in 96 representative soil profiles of German arable land down to 1 m depth. Results : We found that the German arable soils stored, on average, 8 t ha^?1 of total P, of which nearly 500 kg ha^?1 were readily plant‐available. Notably, one third of plant‐available P was located below the plow layer and one fifth even at depths below 0.5 m. The depth gradients of plant‐available P stocks were affected more by major reference soil group than by texture. Generally, Chernozem but also Anthrosol, Gleysol and Fluvisol exhibited the largest P stocks in German cropland. The contribution of plant‐available P to total P stocks was larger in sandy and extremely acidic (pH < 4.5) soils compared with more fine‐grained and slightly acidic to alkaline soils, possibly because fertilization compensated for overall lower total P stocks at these sites. Generally, the more P was stored in topsoils, the more P was stored also in subsoils. Conclusions : A hypothetical crop utilization of 10% from plant‐available P stocks and 0.1% from total P stocks from shallow subsoil could compensate for P fertilization by ca. 8 kg ha^?1, but the rate of plant‐available P replenishment in subsoil likely remains the crucial factor for the role of subsoil P stocks in crop nutrition. Generally, the large P reserves found in subsoil could act as an ‘insurance' system for crops.     

Effect of ultrasonic power on soil organic carbon fractions

Ultrasonic dispersion is a prevalent tool for soil fractionation. It is widely ignored that variation in ultrasonic power might lead to significantly different dispersion. We evaluated the effect of power variation with constant energy on the fine fraction mass, its organic C content and quality. All parameters increased significantly with power. The term “stable aggregates” as used in fractionation schemes cannot be defined by ultrasonic energy alone but power needs to be standardized, too.     

Connectivity of sediment transport in a semiarid environment: a synthesis for the Upper Jaguaribe Basin,Brazil

Purpose

Hydrosedimentological studies conducted in the semiarid Upper Jaguaribe Basin, Brazil, enabled the identification of the key processes controlling sediment connectivity at different spatial scales (10⁰–10⁴ km²).

Materials and methods

Water and sediment fluxes were assessed from discharge, sediment concentrations and reservoir siltation measurements. Additionally, mathematical modelling (WASA-SED model) was used to quantify water and sediment transfer within the watershed.

Results and discussion

Rainfall erosivity in the study area was moderate (4600 MJ mm ha^?1 h^?1 year^?1), whereas runoff depths (16–60 mm year^?1), and therefore the sediment transport capacity, were low. Consequently, ～60 % of the eroded sediment was deposited along the landscape, regardless of the spatial scale. The existing high-density reservoir network (contributing area of 6 km² per reservoir) also limits sediment propagation, retaining up to 47 % of the sediment at the large basin scale. The sediment delivery ratio (SDR) decreased with the spatial scale; on average, 41 % of the eroded sediment was yielded from the hillslopes, while for the whole 24,600-km² basin, the SDR was reduced to 1 % downstream of a large reservoir (1940-hm³ capacity).

Conclusions

Hydrological behaviour in the Upper Jaguaribe Basin represents a constraint on sediment propagation; low runoff depth is the main feature breaking sediment connectivity, which limits sediment transference from the hillslopes to the drainage system. Surface reservoirs are also important barriers, but their relative importance to sediment retention increases with scale, since larger contributing areas are more suitable for the construction of dams due to higher hydrological potential.     

Process-based modelling of erosion,sediment transport and reservoir siltation in mesoscale semi-arid catchments

Purpose

To support scientifically sound water management in dryland environments a modelling system has been developed for the quantitative assessment of water and sediment fluxes in catchments, transport in the river system, and retention in reservoirs. The spatial scale of interest is the mesoscale because this is the scale most relevant for management of water and land resources.

Materials and methods

This modelling system comprises process-oriented hydrological components tailored for dryland characteristics coupled with components comprising hillslope erosion, sediment transport and reservoir deposition processes. The spatial discretization is hierarchically designed according to a multi-scale concept to account for particular relevant process scales. The non-linear and partly intermittent run-off generation and sediment dynamics are dealt with by accounting for connectivity phenomena at the intersections of landscape compartments. The modelling system has been developed by means of data from nested research catchments in NE-Spain and in NE-Brazil.

Results and discussion

In the semi-arid NE of Brazil sediment retention along the topography is the main process for sediment retention at all scales, i.e. the sediment delivery is transport limited. This kind of deposition retains roughly 50 to 60 % of eroded sediment, maintaining a similar deposition proportion in all spatial scales investigated. On the other hand, the sediment retained in reservoirs is clearly related to the scale, increasing with catchment area. With increasing area, there are more reservoirs, increasing the possibility of deposition. Furthermore, the area increase also promotes an increase in flow volume, favouring the construction of larger reservoirs, which generally overflow less frequently and retain higher sediment fractions. The second example comprises a highly dynamic Mediterranean catchment in NE-Spain with nested sub-catchments and reveals the full dynamics of hydrological, erosion and deposition features. The run-off modelling performed well with only some overestimation during low-flow periods due to the neglect of water losses along the river. The simulated peaks in sediment flux are reproduced well, while low-flow sediment transport is less well captured, due to the disregard of sediment remobilization in the riverbed during low flow.

Conclusions

This combined observation and modelling study deepened the understanding of hydro-sedimentological systems characterized by flashy run-off generation and by erosion and sediment transport pulses through the different landscape compartments. The connectivity between the different landscape compartments plays a very relevant role, regarding both the total mass of water and sediment transport and the transport time through the catchment.     

Ion neutral mass spectrometer results from the first flyby of Titan

The Cassini Ion Neutral Mass Spectrometer (INMS) has obtained the first in situ composition measurements of the neutral densities of molecular nitrogen, methane, molecular hydrogen, argon, and a host of stable carbon-nitrile compounds in Titan's upper atmosphere. INMS in situ mass spectrometry has also provided evidence for atmospheric waves in the upper atmosphere and the first direct measurements of isotopes of nitrogen, carbon, and argon, which reveal interesting clues about the evolution of the atmosphere. The bulk composition and thermal structure of the moon's upper atmosphere do not appear to have changed considerably since the Voyager 1 flyby.     

From micro- to nanofabrication with soft materials

Soft materials are finding applications in areas ranging from microfluidic device technology to nanofabrication. We review recent work in these areas, discuss the motivation for device fabrication with soft materials, and describe applications of soft materials. In particular, we discuss active microfluidic devices for cell sorting and biochemical assays, replication-molded optics with subdiffraction limit features, and nanometer-scale resonators and wires formed from single-molecule DNA templates as examples of how the special properties of soft materials address outstanding problems in device fabrication.     

Fecal Indicator and Pathogen Reduction in Vegetation Microcosms

Municipal wastewater has been applied as a fertilizer to coniferous forest in northern Sweden with the additional aims to purify the wastewater and reduce the treatment costs. This practice has the potential to introduce pathogenic microorganisms from the applied wastewater or sludge to the environment, with a subsequent risk of transmission to exposed humans or animals. Seasonality and climatological conditions, in particular low temperature, humidity and low sun intensity will furthermore affect the persistence of pathogens in the forest in northern Scandinavia and may therefore enhance the survival and thereby the exposure risk. The survival of two pathogens (Salmonella senftenberg and Campylobacter coli) and four fecal indicator organisms; bacteria strains (E. coli and E. fecalis) and bacteriophages (S. typhimurium phage 28 B and ?x174), used here as viral models, was evaluated in microcosms (60 Litre terrariums) with two vegetation regimes (characterized as moss and lichen) at selected temperatures (+3^?C to +27^?C) and artificial light exposure (light and dark). Salmonella persisted in high numbers after 35 days in the vegetation, indicating a potential risk for further transmission. Neither the vegetation regime nor temperature or light exposure as independent factors governed the reduction of the indicator bacteria and the bacteriophages. The persistence of the indicator organisms was generally best supported in the moss vegetation at low temperature in the dark, where the time for a 90% reduction (T₉₀) was in the range from 8 days (E. coli) to 31 days (Salmonella phage). The die-off characteristics found in this study provide baseline values for further validations in the field and verify that the purification and reuse of municipal wastewater in coniferous forest could potentially be responsible for transmission of fecal pathogens to humans and animals.     

Pesticide knowledge and risk perception among adolescent Latino farmworkers

A substantial proportion of the agricultural production in the U.S. is dependent on the labor of Latino farmworkers. While exact figures are not known, it is estimated that adolescents make up 7% of this valuable workforce. These young workers may be at increased risk for the toxic effects of environmental exposures encountered during their work. Furthermore, language barriers and health beliefs may influence the risk perceptions of this population. We conducted a cross-sectional survey of migrant adolescent farmworkers in 1998 to investigate their work practices, health beliefs, and pesticide knowledge. The large majority of the adolescents in our sample were from Mexico, and 36.3% spoke primarily indigenous languages. Many of the adolescents (64.7%) were traveling and working in the U.S. independent of their parents. Few of the adolescents reported having received pesticide training; however, 21.6% of the sample reported that their current work involved mixing and/or applying agricultural chemicals. The scores on the pesticide knowledge questionnaire were found to significantly predict self-reported use of protection for adolescent farmworkers. The results of this study point to a need for improved pesticide training in youth agricultural workers and specialized education efforts directed toward minorities who speak indigenous dialects. Special attention is merited toward adolescent farmworkers who report that their work includes mixing or applying agricultural chemicals. As the number of adolescent farmworkers increases in the U.S. and the characteristics of the migrant stream continue to change, culturally and developmentally appropriate instruments are needed to adequately assess the health beliefs and protective practices of this population.