Editing of CD1d-bound lipid antigens by endosomal lipid transfer proteins

It is now established that CD1 molecules present lipid antigens to T cells, although it is not clear how the exchange of lipids between membrane compartments and the CD1 binding groove is assisted. We report that mice deficient in prosaposin, the precursor to a family of endosomal lipid transfer proteins (LTP), exhibit specific defects in CD1d-mediated antigen presentation and lack Valpha14 NKT cells. In vitro, saposins extracted monomeric lipids from membranes and from CD1, thereby promoting the loading as well as the editing of lipids on CD1. Transient complexes between CD1, lipid, and LTP suggested a "tug-of-war" model in which lipid exchange between CD1 and LTP is on the basis of their respective affinities for lipids. LTPs constitute a previously unknown link between lipid metabolism and immunity and are likely to exert a profound influence on the repertoire of self, tumor, and microbial lipid antigens.     

Expression and localization of angiopoietin family in corpus luteum during different stages of oestrous cycle and modulatory role of angiopoietins on steroidogenesis,angiogenesis and survivability of cultured buffalo luteal cells

The objective of this study was to document the expression and localization of angiopoietin (ANGPT) family members comprising of angiopoietin (ANGPT1 and ANGPT2), and their receptors (Tie1 and Tie2) in buffalo corpus luteum (CL) obtained from different stages of the oestrous cycle, and the modulatory role of ANGPT1 and ANGPT2 alone or in combinations on progesterone (P₄) secretion and mRNA expression of phosphotidylinositide‐3kinase‐protein kinase B (PI3K‐AKT), phosphoinositide‐dependent kinase (PDK), protein kinase B (AKT), Bcl2 associated death promoter (BAD), caspase 3 and von willebrand factor (vWF) in luteal cells obtained from midluteal phase (MLP) of oestrous cycle in buffalo. Real‐time RT‐PCR (qPCR), Western blot and immunohistochemistry were applied to investigate mRNA expression, protein expression and localization of examined factors whereas, the P₄ secretion was assessed by RIA. The mRNA and protein expression of ANGPT1 and Tie2 was maximum (p < .05) in mid luteal phase (MLP) of oestrous cycle. The ANGPT2 mRNA and protein expression was maximum (p < .05) in early luteal phase, decreased in MLP and again increased in late luteal phase of oestrous cycle. ANGPT family members were localized in luteal cells and endothelial cells with a stage specific immunoreactivity. P₄ secretion was highest (p < .05) with 100 ng/ml at 72 hr when luteal cells were treated with either protein alone. The mRNA expression of PDK, AKT and vWF was highest (p < .05) and BAD along with caspase 3 were lowest (p < .05) at 100 ng/ml at 72 hr of incubation period, when cultured luteal cells were treated with either protein alone or in combination. To conclude, our study explores the steroidogenic potential of angiopoietins to promote P₄ secretion, luteal cell survival and angiogenesis through an autocrine and paracrine actions in buffalo CL.     

Use of sub-hourly soil water content measured with a frequency-domain reflectometer to schedule irrigation of cabbages

Laboratory and field measurements of soil water content were obtained using gravimetric and Theta-Probe methods, the latter a frequency-domain reflectometry method. We obtained real-time in situ measurements of soil water content at depths of 30, 80, 160, 240 and 350 mm to evaluate irrigation practice. A datalogger recording the change in soil water content (and cumulative irrigation) at 20-min intervals was used, with appropriate calculations and graphical presentation, to predict the time and amount of irrigation water required for soil water content to reach field capacity. Measurements at three instead of five depths yielded a different depth-averaged soil water content under relatively dry conditions (less than 0.273 m³ m⁻³), and predicted a later start for irrigation and early crop water stress. Investing in additional sensores for scheduling irrigation would be compensated by financial resources saved through avoiding excess or deficit irrigation, and the associated application cost, loss of nutrients and soil due to deep percolation and erosion, and loss of crop production.     

Three scales of temporal resolution from automated soil respiration measurements

Soil respiration (R_s) is a combination of autotrophic and heterotrophic respiration, but it is often modeled as a single efflux process, influenced by environmental variables similarly across all time scales. Continued progress in understanding sources of variation in soil CO₂ efflux will require development of R_s models that incorporate environmental influences at multiple time scales. Coherence analysis, which requires high temporal frequency data on R_s and related environmental variables, permits examination of covariation between R_s and the factors that influence it at varying temporal frequencies, thus isolating the factors important at each time scale. Automated R_s measurements, along with air, soil temperature and moisture were collected at half hour intervals at a temperate forest at Harvard Forest, MA in 2003 and a boreal transition forest at the Howland Forest, ME in 2005. As in other temperate and boreal forests, seasonal variation in R_s was strongly correlated with soil temperature. The organic and mineral layer water contents were significantly related to R_s at synoptic time scales of 2–3 days to weeks, representing the wetting and drying of the soils as weather patterns move across the region. Post-wetting pulses of R_s were correlated with the amount of precipitation and the magnitude of the change from pre-wet-up moisture content to peak moisture content of the organic horizon during the precipitation events. Although soil temperature at 8–10 cm depth and R_s showed strong coherence at a 24-h interval, calculated diel Q₁₀ values for R_s were unreasonably high (6–74) during all months for the evergreen forest and during the growing season for the deciduous forest, suggesting that other factors that covary with soil temperature, such as canopy assimilatory processes, may also influence the diel amplitude of R_s. Lower diel Q₁₀ values were obtained based on soil temperature measured at shallower depths or with air temperature, but the fit was poorer and a lag was needed to improve the fit (peak R_s followed peak air temperature by several hours), suggesting a role for delayed substrate supply from aboveground processes to affect diel patterns of R_s. High frequency automated R_s datasets afford the opportunity to disentangle the temporal scales at which environmental factors, such as seasonal temperature and phenology, synoptic weather events and soil moisture, and diel variation in temperature and photosynthesis, affect soil respiration processes.     

DNA barcoding of Northern Nearctic Muscidae (Diptera) reveals high correspondence between morphological and molecular species limits

Background

Disturbance is an important process structuring ecosystems worldwide and has long been thought to be a significant driver of diversity and dynamics. In forests, most studies of disturbance have focused on large-scale disturbance such as hurricanes or tree-falls. However, smaller sub-canopy disturbances could also have significant impacts on community structure. One such sub-canopy disturbance in tropical forests is abscising leaves of large arborescent palm (Arececeae) trees. These leaves can weigh up to 15 kg and cause physical damage and mortality to juvenile plants. Previous studies examining this question suffered from the use of static data at small spatial scales. Here we use data from a large permanent forest plot combined with dynamic data on the survival and growth of > 66,000 individuals over a seven-year period to address whether falling palm fronds do impact neighboring seedling and sapling communities, or whether there is an interaction between the palms and peccaries rooting for fallen palm fruit in the same area as falling leaves. We tested the wider generalisation of these hypotheses by comparing seedling and sapling survival under fruiting and non-fruiting trees in another family, the Myristicaceae.

Results

We found a spatially-restricted but significant effect of large arborescent fruiting palms on the spatial structure, population dynamics and species diversity of neighbouring sapling and seedling communities. However, these effects were not found around slightly smaller non-fruiting palm trees, suggesting it is seed predators such as peccaries rather than falling leaves that impact on the communities around palm trees. Conversely, this hypothesis was not supported in data from other edible species, such as those in the family Myristicaceae.

Conclusions

Given the abundance of arborescent palm trees in Amazonian forests, it is reasonable to conclude that their presence does have a significant, if spatially-restricted, impact on juvenile plants, most likely on the survival and growth of seedlings and saplings damaged by foraging peccaries. Given the abundance of fruit produced by each palm, the widespread effects of these small-scale disturbances appear, over long time-scales, to cause directional changes in community structure at larger scales.     

Accuracy of selected neurological clinical tests in diagnosing MRI-detectable forebrain lesion in dogs

This retrospective case study aims to evaluate the accuracy of menace response, response to nasal stimulation and proprioceptive placing in diagnosing forebrain lesion in dogs. A total of 145 client-owned dogs investigated by magnetic resonance imaging study of the brain between December 2017 and June 2019 were evaluated. Seventy-one dogs with no magnetic resonance imaging-detectable intracranial and significant cerebrospinal fluid abnormality or recent history of seizure (<48 h) served as controls. Binary regression analysis was performed to determine the sensitivity, specificity and likelihood ratios of each selected test. Older age at presentation was a significant risk factor for the presence of a forebrain lesion. Menace (62.5%) and proprioceptive deficits (40.5%) were common findings in all dogs. They were also significantly associated with the presence of forebrain abnormality. Moreover, they were more sensitive (77.3% and 82.2%, respectively) and specific (50.0% and 62.5%, respectively) when applied to dogs aged 6 years or older. Nonetheless, all of these tests' likelihood ratios, and thus reliability are poor. These neurological tests are commonly employed for diagnosing forebrain disease in dogs, yet are not highly accurate in diagnosing forebrain abnormality. Clinicians should interpret these clinical test results along with the patient history when designing a diagnostic plan.     

Atmospheric and soil drought reduce nocturnal conductance in live oaks

Nocturnal and daytime whole-canopy transpiration rate (E) and conductance (g = E/VPD, where VPD is leaf to air vapor pressure difference) were assessed gravimetrically in drought-treated and well-watered 3-year-old saplings of live oak species (Quercus series Virentes Nixon) from the southeastern USA (Quercus virginiana Mill.) and Central America (Q. oleoides Cham. and Schlecter). Our objectives were to: (1) quantify nocturnal and daytime E and g in a controlled environment; (2) determine the impact of severe drought on nocturnal E and g; and (3) examine whether unavoidable water loss through the epidermis could account for nocturnal water loss. We calculated daytime E during peak daylight hours (between 0930 and 1330 h) and nocturnal E during complete darkness (between 2200 and 0500 h). In addition to reducing E and g during the daytime, drought-treated plants reduced nocturnal E and g on a whole-canopy basis by 62-64% and 59-61%, respectively, and on a leaf-level basis by 27-28% and 19-26%, respectively. In well-watered plants, nocturnal g declined with increasing VPD, providing evidence for stomatal regulation of nocturnal transpiration. In drought-treated plants, g was low and there was no relationship between nocturnal g and VPD, indicating that water loss could not be reduced further through stomatal regulation. Both daytime and nocturnal g declined curvilinearly with predawn water potential for all plants, but nocturnal g was unrelated to predawn water potentials below -1 MPa. The reductions in daytime and nocturnal E and g during drought were associated with decreases in whole-plant and leaf hydraulic conductances. Observed nocturnal g was within the same range as epidermal conductance for oak species determined in previous studies under a range of conditions. Nocturnal E rose from 6-8% of daytime E for well watered plants to 19-20% of daytime E for drought-treated plants. These results indicate that, during drought, saplings of live oak species reduce g to a minimum through stomatal closure, and experience unavoidable water loss through the epidermis.     

Comparative Expression Analysis of Gametogenesis‐Associated Genes in Foetal and Adult Bubaline (Bubalus bubalis) Ovaries and Testes

This study was conducted to identify and analyse the expression of gametogenesis‐associated genes and proteins in foetal and adult buffalo gonads of both the sexes. Relative quantification of the genes was determined by qPCR and Western blotting. Immunohistochemistry was also performed for various gametogenesis‐associated proteins in foetal and adult gonads of both the sexes. We observed significantly (p < 0.05) increased expression of primordial germ cell‐specific, meiotic as well as genes associated with oocyte maturation and development in foetal ovaries as compared to the adult ones. However, significantly (p < 0.05) increased expression of proteins associated with oocyte maturation like GDF9 and ZP4 was found in adult ovaries, indicating temporal regulation of mRNA translation during oogenesis. Meiotic genes showed significantly (p < 0.05) increased expression in adult testes as compared to foetal testes and ovaries, indicating onset of meiosis at a later stage in spermatogenesis. In general, the expression of primordial germ cell‐associated as well as meiotic genes was higher in adult testes, indicating the increased biological activity in the organ. Immunohistochemistry revealed localized expression of gametogenesis‐associated proteins in ovarian follicles and seminiferous tubules of testes, while the surrounding somatic tissues were devoid of these proteins. The study gives an understanding of the sequential and temporal events of gene expression as well as mRNA translation during male and female gametogenesis. It could also be concluded that follicles and seminiferous tubules are the functional units of the female and male gonads, respectively, and their function could be enhanced by appropriate chemical and genetic intervention of the somatic tissue immediately surrounding them. This assumes importance in the context that buffalo attains sexual maturity at an older age of 2–3 years and have smaller ovaries with lesser number of primordial follicles in comparison with cattle, which is suggested to be the main reason of their poor breeding performance.     

Effects of size and temperature on metabolic rate

We derive a general model, based on principles of biochemical kinetics and allometry, that characterizes the effects of temperature and body mass on metabolic rate. The model fits metabolic rates of microbes, ectotherms, endotherms (including those in hibernation), and plants in temperatures ranging from 0 degrees to 40 degrees C. Mass- and temperature-compensated resting metabolic rates of all organisms are similar: The lowest (for unicellular organisms and plants) is separated from the highest (for endothermic vertebrates) by a factor of about 20. Temperature and body size are primary determinants of biological time and ecological roles.     

Varietal Differences of Wheat and Triticale to Water Stress

Six wheat ( Triticurn aestivum L.) and ten triticale (x Triticosecale Wittmack) cultivars were screened for water stress tolerance during germination and seedling stages in the laboratory and growth chamber, respectively. Germinating seeds and hydroponically-grown seedlings were subjected to osmotic stresses of –0.3 and –0.6 MPa using polyethylene glycol M. W. 8000. Both species and cultivar differences were found among the tested genotypes for all the parameters analyzed in both germination and seedling tests. Germination stress index was lower for seed exposed to -0.6 MPa than for -0.3 MPa osmotic stress. A significant relationship was found among plant height, fresh weight and dry weight stress indices evaluated during the seedling test. The cultivars that grew taller under stress conditions had greater dry matter accumulation, as well as higher germination and water uptake stress indices indicating the reliability of height to predict cultivar performance under such conditions. The cultivars Stacy (wheat) and Eu 14/15 (triticale) had higher dry matter accumulation, higher water uptake and leaf water potential, greater height and better germination under stress conditions than the other cultivars tested. Conversely, the cultivars GA 781014 (wheat) and Am 4147 (triticale) performed poorly with respect to all the parameters analyzed. Based on results from germination and seedling tests, the cultivars Stacy and Eu 14/15 were selected for more stress studies in the greenhouse and field.