In Silico Evaluation of Antifungal Compounds from Marine Sponges against COVID-19-Associated Mucormycosis

The world is already facing the devastating effects of the SARS-CoV-2 pandemic. A disseminated mucormycosis epidemic emerged to worsen this situation, causing havoc, especially in India. This research aimed to perform a multitargeted docking study of marine-sponge-origin bioactive compounds against mucormycosis. Information on proven drug targets and marine sponge compounds was obtained via a literature search. A total of seven different targets were selected. Thirty-five compounds were chosen using the PASS online program. For homology modeling and molecular docking, FASTA sequences and 3D structures for protein targets were retrieved from NCBI and PDB databases. Autodock Vina in PyRx 0.8 was used for docking studies. Further, molecular dynamics simulations were performed using the IMODS server for top-ranked docked complexes. Moreover, the drug-like properties and toxicity analyses were performed using Lipinski parameters in Swiss-ADME, OSIRIS, ProTox-II, pkCSM, and StopTox servers. The results indicated that naamine D, latrunculin A and S, (+)-curcudiol, (+)-curcuphenol, aurantoside I, and hyrtimomine A had the highest binding affinity values of −8.8, −8.6, −9.8, −11.4, −8.0, −11.4, and −9.0 kcal/mol, respectively. In sum, all MNPs included in this study are good candidates against mucormycosis. (+)-curcudiol and (+)-curcuphenol are promising compounds due to their broad-spectrum target inhibition potential.     

Comparative yield component analysis in <Emphasis Type="Italic">Gossypium hirsutum</Emphasis> parents using fibre quality grouping

The usual practice of estimating association and direct and indirect effects among various traits in Gossypium hirsutum is with ungrouped genetic material based on staple length and strength. During 2003–2004 and 2004–2005 genotypic and phenotypic association among ten characters were estimated in G. hirsutum genotypes: (i) set-1: 10 genotypes of low fibre strength (≤196.2 mN/tex) and medium staple length (≤25.0 mm), (ii) set-2: 10 genotypes of high fibre strength (≥235.44 mN/tex) and long staple length (≥28 mm) and (iii) set-3: 20 genotypes of set-1 and 2. The differences in the estimates of associations, direct and indirect effects for different characters in fibre quality groups were examined. The complete analysis of variance for the characters under study viz; days to 50% flowering, plant height (cm), number of monopodial and sympodial branches per plant, seed cotton yield per plant (g), boll weight (g), total number of bolls per plant, lint %, 2.5% span length (mm) and fibre strength (mN/tex) indicated highly significant genotypic differences for genotypes, years and genotype × years interaction. Variation within medium staple length and low strength (set-1), high staple length and high strength genotypes (set-2) and their interaction with year were also significant. Medium staple length and low strength (set-1) versus high staple length and high strength component (set-2) was significant for all the traits indicating significant variability between the sets. A true relationship and direct selection were observed for days to 50% flowering, number of monopodial and sympodial branches per plant with seed cotton yield in the three sets suggesting that separation of genetic material based on staple length and fibre strength for improvement of seed cotton yield through these traits is not required. Magnitude and direction of direct effect and association with yield of the other traits; plant height, number of total bolls per plant, boll weight, lint %, staple length and fibre strength differed between the sets. This study concluded that more successful planning of a breeding programme can be made through path coefficient analysis if the genetic material is grouped based on staple length and fibre strength. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Proximate Composition,Mineral Content and Fatty Acids Analyses of Aromatic and Non-Aromatic Indian Rice

Awareness on nutritive value and health benefits of rice is of vital importance in order to increase the consumption of rice in daily diet of the human beings. In this study, a total of six aromatic and two non-aromatic rice accessions grown in India were analysed for their nutritional quality attributes including proximate composition, mineral contents and fatty acids. Data with three replications were used to measure Pearson's simple correlation co-efficient in order to establish the relationship among various nutritional quality attributes. The result on proximate composition showed that Govind Bhog had the highest moisture (13.57%) and fat (0.92%) content, which signifies its tasty attribute. Badshah Bhog exhibited the highest fibre content (0.85%), carbohydrate content (82.70%) and food energy (365.23 kCal per 100 g). Among the minerals, the higher Ca (98.75 mg/kg), Zn (17.00 mg/kg) and Fe (31.50 mg/kg) were in Gopal Bhog, whereas the highest Na (68.85 mg/kg) was in Badshah Bhog, the highest K (500.00 mg/kg) was in Swetganga, Khushboo and Sarbati. The highest contents of unsaturated fatty acids viz. oleic acid (49.14%), linoleic acid (46.99%) and linolenic acid (1.27%) were found in Sarbati, whereas the highest content of saturated fatty acids viz. myristic acid (4.60%) and palmitic acid (31.91%) were found in Govind Bhog and stearic acid (6.47%) in Todal. The identified aromatic rice accessions Gopal Bhog, Govind Bhog and Badshah Bhog and non-aromatic rice accession Sarbati were found nutritionally superior among all eight tested accessions. The nutritional quality oriented attributes in this study were competent with recognized prominent aromatic and non-aromatic rice accessions as an index of their nutritional worth and recommend to farmers and consumers which may be graded as export quality rice with good unique nutritional values in international market.     

Comparative fatty acid profiles of wild and farmed tropical freshwater fish rohu (<Emphasis Type="Italic">Labeo rohita</Emphasis>)

The proximate composition of the whole body and the fatty acid composition of the liver, muscle, eye and brain of wild and cultured rohu (Labeo rohita) were analyzed. The cultured species was found to have significantly (P < 0.05) higher lipid contents than its wild counterpart. The saturated (SFA) and monounsaturated (MUFA) fatty acid contents were significantly higher in the cultured species, whereas the n-6 and n-3 polyunsaturated fatty acid (PUFA) levels were higher in the wild species. Fatty acids C16:0 and C18:1 n-9 were the principal fatty acids of the SFAs and MUFAs, respectively, identified in the analyses. Docosahexaenoic acid, eicosapentaenoic acid, and arachidonic acid were the predominant PUFAs in both groups, and all three were found to be present at significantly (P < 0.05) higher levels in the wild species. Erucic acid (C22:1 n-9), which was the predominant fatty acid (30.76%) in the feed, was detected only at low levels in muscle (0.30%), liver (1.04%) and eye (1.28%) of cultured fish tissue.     

Three-year rabies duration of immunity in dogs following vaccination with a core combination vaccine against canine distemper virus, canine adenovirus type-1, canine parvovirus, and rabies virus

Thirty-two seronegative pups were vaccinated at 8 weeks of age with modified-live canine distemper virus (CDV), canine adenovirus type-2 (CAV-2), and canine parvovirus (CPV) vaccine and at 12 weeks with a modified-live CDV, CAV-2, CPV, and killed rabies virus vaccine. An additional 31 seronegative pups served as age-matched, nonvaccinated controls. All test dogs were strictly isolated for 3 years after receiving the second vaccination and then were challenged with virulent rabies virus. Clinical signs of rabies were prevented in 28 (88%) of the 32 vaccinated dogs. In contrast, 97% (30 of 31) of the control dogs died of rabies infection. These study results indicated that no immunogenic interference occurred between the modified-live vaccine components and the killed rabies virus component. Furthermore, these results indicated that the rabies component in the test vaccine provided protection against virulent rabies challenge in dogs 12 weeks of age or older for a minimum of 3 years following vaccination.     

SUSTAINABLE SUGARCANE CROPPING IN CHINA

Demand for sugar is projected to grow in China for the foreseeable future.However, sugarcane production is unlikely to increase due to increasing production cost and decreasing profit margin. The persisting sugarcane yield plateau and the current cropping system with fertilizer overuse, soil acidification and pests and diseases remain the major productivity constraints.Sugarcane agriculture supports the livelihood of about 28 million farmers in South China; hence, sustaining it is a socioeconomi...     

Morphological variability in cultivated and wild species of Luffa (Cucurbitaceae) from India

Immature fruits of cultivated species of Luffa are commonly used as summer vegetable in India. Rich morphological variability occurs in cultivated species of Luffa in different growing regions of the country. To study morphological variability in cultivated and wild Luffa from different agro-ecological regions of India, a total of seventy accessions were assembled. Morphological variations in leaf, fruit and seed characters were found to delimit cultivated and wild Luffa species. Cluster analysis revealed two major clusters, one comprising of 36 accessions of Luffa acutangula and the other of 30 accessions belonging to L. aegyptiaca. A local cultivar “Satputia” (L. hermaphrodita) was classified along with cultivated L. acutangula and wild L. acutangula var. amara. Wild species namely L. graveolens and L. echinata were clustered closer to the L. acutangula.     

Responses of maize × teosinte derived backcross inbred lines (BILs) to maydis leaf blight (MLB) disease

Euphytica - Rice growth and productivity are greatly affected by cold stress, which is likely to become more of a hindrance for high and stable rice yields. To identify cold tolerance at the...     

Calibration and Categorization of Plant Available Silicon in Rice Soils of South India

ABSTRACT

Calibration of field crop responses to nutrient availability acts as a basis for making fertilizer recommendations from soil and tissue analysis. The purpose of this study was to evaluate and summarize silicon (Si) fertilization of rice in different soils of south India. The experiment consists of four levels of calcium silicate as Si with three replications. Initially, soils were analyzed using eleven different extractants. The grain and straw yield were recorded and analyzed for Si content. The critical levels for plant available Si in the soil ranged from 14 mg kg^?1 (distilled water-1) to 207 mg kg^?1 [0.005 M sulfuric acid (H₂SO₄)]. There was a wide variation in low, medium, and high categories of plant available Si for different extractants calculated based on percent relative yield. The critical level of Si in straw and grain were 2.9 and 1.2%, respectively.     

Chemical transformation of copper in some sludge-amended soils

In a laboratory incubation study, the periodic changes in different chemical fractions of copper (Cu) in three sludge-amended soil types (acidic sandy clay loam, neutral clay loam and alkaline clay loam) of varying soil reaction were monitored under field capacity and flooding moisture regime over 16 months. The water soluble and exchangeable fraction of Cu was very low (≤1% of total Cu) in all three soil types. At the end of incubation (16 months), the sodium acetate extractable (carbonate sorbed)- and residual-Cu fractions transformed into Fe-Mn oxide fraction, irrespective of moisture regime in all three soil types. However, the extent of transformation varied among soils.