The Welfare of Laboratory Animals

Veterinary Research Communications -     

Genomic characterization of the first oral avian papillomavirus in a colony of breeding canaries (<Emphasis Type="Italic">Serinus canaria</Emphasis>)

Papillomaviruses are non-enveloped, DNA viruses that infect skin and mucosa of a wide variety of vertebrates, causing neoplasias or simply persisting asymptomatically. Avian papillomaviruses, with six fully sequenced genomes, are the second most studied group after mammalian papillomaviruses. In this study, we describe the first oral avian papillomavirus, detected in the tongue of a dead Yorkshire canary (Serinus canaria) and in oral swabs of the same bird and other two live canaries from an aviary in Madrid, Spain. Its genome is 8,071 bp and presents the canonical papillomavirus architecture with six early (E6, E7, E1, E9, E2, E4) and two late open reading frames (L1 and L2) and a long control region between L1 and E6. This new avian papillomavirus L1 gene shares a 64% pairwise identity with FcPV1 L1, so it has been classified as a new species (ScPV1) within the Ethapapillomavirus genus. Although the canary died after showing breathing problems, there is no evidence that the papillomavirus caused those symptoms so it could be part of the oral microbiota of the birds. Hence, future investigations are needed to evaluate the clinical relevance of the virus.     

Thermal and spectrophotometric analysis of some fungal melanins and soil humic compounds

Seven types of fungal melanins were compared with humic compounds from chernozem and podzol soils and with commercial humic acid. The results indicate some similarities but also distinct differences between the melanins and humic substances in spectral characteristics in the UV and visible regions and in their resistance to thermal degradation.     

Changes in enzymic activity and distribution of acid-soluble,amino acid-nitrogen in soil during nitrogen immobilization and mineralization

During a period of immobilization of nitrate-¹⁵N and mineralization of organic N in a sandy-loam, changes were recorded in: (a) the concentration of an added carbon source, glucose-¹⁴C: (b) evolution of ¹⁴CO₂: (c) bacterial populations; (d) distribution and concentration of newly-synthesized, acid-soluble, amino acid-¹⁵N; and (e) distribution and activities of several oxidative and hydrolytic enzyme systems.Added glucose-¹⁴C was rapidly metabolized by the soil microflora. After 1.5 day's incubation, when only 3.6 per cent of the added glucose was present, 68 per cent of the ¹⁴C remained in the soil-microbial system. During this period there was a marked increase in viable bacterial numbers and an almost complete immobilization of nitrate-¹⁵N. On continued incubation, microbial metabolites were oxidized at decreasing rates, the more rapid phase corresponding to a period of net decline in the viable bacterial population.Soil was fractionated by a relatively mild procedure into components containing: (a) extractable proteins; (b) extractable amino acids and peptides; (c) particulate material containing microbial cells, cell debris and material bound to larger soil particles; and (d) microbial metabolites mainly bound to soil colloids. Although the total, acid-soluble, amino acid-¹⁵N remained relatively constant for about 50 days, there were marked changes in their concentration in different fractions, especially in the extracts and in the fraction containing fine colloidal material. However, the relatively large decline in labelled, acid-soluble, amino acid-¹⁵N occurred during the active phase of oxidation of microbial metabolites when little net mineralization of labelled compounds occurred.Increases in enzymic activities generally coincided with increased viable bacterial populations although there were some exceptions, notably casein and benzoyl arginine amide-hydrolysing enzymes. The stabilities of the newly-formed enzymes varied markedly. The greatest relative changes in activity occurred with the casein-hydrolysing enzymes. Their activity reached a maximal value after the main flush of bacterial growth, was short-lived and was to a large extent extractable. The formation and disappearance of this extracellular proteolytic activity coincided approximately with that of a secondary peak of extractable, newly-synthesized, protein-¹⁵N. In general however, changes in enzymic activity could not be identified with changes of protein-¹⁵N concentrations of the different fractions.     

A GIS-based plant prediction model for wetland ecosystems

An existing non-spatial model for the prediction of response of wetland plant species on ecological factors has been transformed into a GIS-based prediction model which produces spatial output at the landscape scale. The input, spatial patterns of the ecological factors, were constructed with geostatistical spatial interpolation (kriging). With this GIS-based model the spatial patterns of presence and absence of 78 wetland plant species are predicted for an area with wetlands in the Netherlands of approximately 500 square kilometers. The GIS-based model has been validated, and the estimated uncertainty of the input has been propagated through the model. At the species level the output shows spatially coherent and non-random patterns. The validation is affected by the propagation of input errors through the model. The number of valid predictions declines approximately 10–20% when 95% confidence intervals are used in the validation. This study shows that it is feasible to use a geostatistical interpolation method to construct spatial patterns of ecological factors on a landscape scale and to use these patterns as input for a GIS-based prediction model. The added uncertainty on the input values however, affects the number of valid predictions of the model.     

Zur Chemie der Verunreinigungen des Hexachlorcyclohexans

Ohne Zusammenfassung