Speciation of sulphur in soils and soil particles by X-ray spectromicroscopy

Current wet chemical methods for the speciation of sulphur (S) in soils are inaccurate and do not allow one to assess the S speciation of individual soil particles and colloids. X-ray microscopy and Near Edge X-ray Absorption Fine structure Spectroscopy (NEXAFS) can be used to study individual species of S at the K-adsorption edge. We have used these techniques to identify and quantify S species in bulk soil, soil particles and colloids from Oh and Bh horizons of two forested Podzols. The partitioning of soil sulphur as determined on bulk samples of the Oh horizons by X-ray spectromicroscopy agreed fairly well with the results of a conventional S speciation for the soil at Schluchsee, and reasonably well for that at Rotherdbach. The NEXAFS analyses on individual soil particles revealed that they are richer in reduced organic sulphur than the bulk soil for the Schluchsee Oh and richer in sulphate for Rotherdbach Oh. The techniques can be used reliably to separate and quantify sulphur species with different oxidation states in the soil. The combination of X-ray transmission and sulphur fluorescence images with unfocused and focused NEXAFS spectra at the K-adsorption edge of sulphur at specific microsites allowed us to compare the distribution of S species in bulk soil with that of distinct soil particles and soil colloids. Moreover, we can use it to assess the spatial distribution of different S species on soil particles on a scale of a few hundred nanometres.     

Soil carbon and nitrogen changes after clearing mulga (Acacia aneura) vegetation in Queensland,Australia: Observations,simulations and scenario analysis

In the work reported here we examine the changes in soil (organic) carbon and nitrogen that are observed after converting a stand of nitrogen-fixing mulga trees (Acacia aneura) to buffel-grass (Cenchrus ciliaris) pasture that contained no nitrogen-fixing legumes. A range of previously reported field measurements was compared against the output of CenW 3.1, a reformulated version of the CENTURY model.The model successfully reproduced the observed patterns of soil carbon, C:N ratios and nitrogen mineralisation rates under mulga vegetation. This included relatively small changes in carbon concentration down to 1 m, C:N ratios of around 11–13 across all soil depths, substantial nitrogen mineralisation rates to a depth of 90 cm and, after clearing, an on-going decrease in soil organic carbon and nitrogen stocks.Interpretation of experimental observations was made difficult by the addition of a large amount of ‘dead’ organic matter from killed mulga roots after clearance. This material may be excluded through sieving (to 2 mm) in measurements taken shortly after tree removal, but may be included in later-year sampling as the partly decomposed material might be able to pass through sieves. Past work has usually ignored consideration of dead coarse roots. For the site carbon budget, changes in live biomass and surface litter significantly outweighed the small changes in soil organic carbon, and changes in decaying coarse roots were quantitatively more important than changes in other organic carbon pools.Modelled nitrogen mineralisation rates were lower under buffel-grass than those under mulga and showed significant year-to-year variations that were in line with varying rainfall. It showed no consistent trend over the first 20 years after clearing because the effect of decreasing nitrogen stocks was balanced by an increase in organic matter quality with the change from lignin-rich mulga litter to buffel-grass litter with lower lignin concentration. Nitrogen mineralisation rates gradually decreased thereafter as nitrogen stocks continued to decrease but litter quality stabilised.A scenario analysis showed that soil carbon and nitrogen trends could be affected by changing the nitrogen budget through inclusion of legumes or cessation of nutrient removal by grazing animals. Inclusion of legumes was needed to halt the decline in soil nitrogen and to ensure the long-term maintenance, or increase, in nitrogen stocks.     

Infectivity,inoculum density and germination of Spongospora subterranea resting spores: a solution-culture test system1

Spongospora subterranea, causal agent of powdery scab of potatoes and vector of potato mop-top furovirus, survives in the soil as balls of resting spores (cystosori). So far, the factors affecting longevity, germination and infectivity of cystosori have not been investigated. A rapid and versatile bioassay with tomatoes as bait plants has been developed to quantify the infectivity of cystosorus inoculum or infested soil. The intensity of root infection, as a measure of infectivity, was determined by evaluating the quantity of zoosporangia present in epidermal cells and root hairs of the whole, stained root system. A correlation was obtained between the intensity of root infection and the cystosorus inoculum density in nutrient solution. Sterile soil suppressed the inoculum potential of pure cystosori. Infectivity of untreated soil decreased with increasing time of storage. Root infection was not influenced by the pH level of the nutrient solution.     

Trifluralin effects on the development of cotton in arid zone soils

The effect of trifluralin on the growth and development of cotton plants in low-organic-matter soils from the northern Negev of Israel was studied. Trifluralin exhibited linear sorp tion isotherms on these soils, Trifluralin and dinitramine losses from soils under varying moisture regimes and application practices were determined in open systems. The data were fitted to both first-order and biexponential kinetic equations. In about 50% of cases the biexponential kinetic model provided a better fit to the data, but no relationship could be found between the model parameters and environmental or soil properties. Losses were generally greater at field capacity than at 50% field capacity, and at 27°C than at 15°C, and in soils with a lower organic matter content. The trifluralin application rate was negatively correlated with vegetative growth parameters of cotton, but the correlation became weaker with increasing soil organic carbon content. Trifluralin delayed boll production in coarse textured soils, the longest delay occurring at higher application rates. It is concluded that in light soils that contain very little organic matter, trifluralin rates must be maintained at the minimum level required for adequate weed control to prevent damage to crops.     

Comparison of immunofluorescence staining and indirect isolation for the detection of Corynebacterium flaccumfaciens in bean seeds1

Corynebacterium flaccumfaciens, causing bacterial wilt in bean, is a quarantine organism for Europe. This paper compares two methods for detecting C. flaccumfaciens in seed lots on the market. Experimentally contaminated bean seeds were homogenized and a standard extraction and concentration procedure was used. The final pellets were used for immunofluorescence staining and indirect isolation (through bean seedlings). The immunofluorescence staining sensitivity threshold was 1.23 × 10⁷, corresponding to 1.82 × 10⁴ fluorescent cells per ml of final concentrate. The risk of false negative reactions to immunofluorescence staining caused by serologically unrelated C. flaccumfaciens strains was also examined. The indirect isolation sensitivity threshold was 1.23 × 10⁶ producing 43% symptomatic plants and 53% positive reisolation. There was no serious interference between C. flaccumfaciens and Pseudomonas syringae pv. phaseolicola in mixed inoculations and both pathogens were successfully reisolated. The comparative results are discussed in relation to the applicability of the methods to commercial lots of bean seeds.     

Influence of long-time transportation stress on re-activation of Salmonella typhimurium DT104 in experimentally infected pigs

In this study a Salmonella Typhimurium infection model in swine was used in order to investigate the influence of pre-mortal stress induced by long time period transportation on the re-activation of Salmonella in experimentally infected pigs. Salmonella free pigs were exposed to a highly virulent strain of Salmonella Typhimurium DT104 by direct intragastrical administration. Clinical parameters were monitored and the shedding rate in faeces was qualitatively and quantitatively determined by standard bacteriological procedures for 21 days. The distribution of the challenge organism in 14 different internal organs of transported and nontransported animals was determined. All infected animals developed clinical signs of salmonellosis 12 to 24 hours post infection. About 88 to 100% of the fecal samples were culture-positive up to post exposure day 6, and then varied from 71 to 92% until slaughter, respectively. At necropsy S. Typhimurium was recovered most frequently from caecum and ileocolic lymph nodes (83%), colon (79%), palatine tonsils (71%) and mandibular lymph nodes (62.5%). A negative impact of transportation stress on the shedding rate and the general condition of the animals was observed.     

Identification of focal adenomyosis as a uterine lesion in two dogs

A focal uterine adenomyosis is described in two bitches. In both cases, the uterus showed knobbly enlargements of 4 to 8 cm in diameter, which resulted in distinct clinical symptoms. Other pathological changes of the uterus were not present. One bitch was presented because of a history of vaginal discharge of several months' duration. Radiographs, as well as ultrasonography, revealed a soft tissue lesion at the cervix. The other bitch showed a marked reduction in its general condition and a sudden onset of a tense abdomen. Radiologically, a lesion of soft tissue opacity was observed in the mid-abdomen and was seen to originate from the left uterine horn during exploratory laparotomy. A torsion of the lesion was present, which explained the clinical signs in this second case.