Parental participation in progeny and effective population sizes in experimental seed orchards of wild cherry Prunus avium L. (Batsch)

Parents and progenies genetic diversity, and male and female contributions to the seed crop were assessed in three experimental Prunus avium seed orchards. Collected data were used to compare different effective population sizes, based on phenological, seed crop and paternity analysis. Our results did not show any difference of genetic diversity between parents and progenies. A limited pollen pollution was detected. We showed that distance and coflowering among clones had a significant effect on effective pollination, and a significant effect of the production of flowers was revealed in one of the seed orchards. Our study also revealed a quite low number of effective size of fathers per mother, but high effective sizes of mothers, fathers and parents at the level of the seed orchard. Finally, the calculation of effective size of mothers, fathers and parents was not highly modified when having the complete information based on the paternity analysis.     

Anhydrous goat's milk fat: thermal and structural behaviors studied by coupled differential scanning calorimetry and X-ray diffraction. 2. Influence of cooling rate

Crystallization and melting properties of triacylglycerols (TGs) in anhydrous goat's milk fat (AGMF) are investigated by X-ray diffraction as a function of temperature (XRDT) coupled with high-sensitivity differential scanning calorimetry (DSC), using synchrotron radiation and Microcalix. The polymorphic behavior of AGMF was monitored by varying the cooling rates between 5 and 1 degrees C/min from 45 to -20 degrees C with their subsequent melting at 1 degrees C/min. Quenching of AGMF at -20 degrees C was also examined to determine the metastable polymorphic form of AGMF. At intermediate cooling rates, TGs in AGMF crystallize, from about 18 degrees C in two different lamellar structures with triple chain length 3Lalpha stacking of 72 A and a double chain length 2Lalpha stacking of 48 A, which are correlated to two overlapped exothermic peaks recorded by DSC. A reversible transition sub alpha <--> alpha was observed. Subsequent heating at 1 degrees C/min shows numerous structural rearrangements before final melting. At fast cooling of AGMF (5 degrees C/min), similar unstable crystalline varieties are formed while three endotherms are recorded. Several new unstable lamellar structures are observed after quenching. All of these data are compared to those previously reported at slow cooling (0.1 degrees C/min) showing a relative stability of the structures formed. In spite of general similitude, the thermal and structural behavior of the goat's milk is more complex than that of the cow's milk.     

BMC ecology image competition 2017: the winning images

For the fifth year, BMC Ecology is proud to present the winning images from our annual image competition. The 2017 edition received entries by talented shutterbug-ecologists from across the world, showcasing research that is increasing our understanding of ecosystems worldwide and the beauty and diversity of life on our planet. In this editorial we showcase the winning images, as chosen by our Editorial Board and guest judge Chris Darimont, as well as our selection of highly commended images. Enjoy!     

Prediction of model pools for a long‐term experiment using near‐infrared spectroscopy

Fourty‐one soil samples from the “Eternal Rye” long‐term experiment in Halle, Germany, were used to test the usefulness of near‐infrared spectroscopy (NIRS) to differentiate between C derived from C₃ and C₄ plants by using the isotopic signature (δ¹³C) and to predict the pools considered in the Rothamsted Carbon (RothC) model, i.e., decomposable plant material, resistant plant material, microbial biomass, humified organic matter, and inert organic matter. All samples were scanned in the visible‐light and near‐infrared region (400–2500 nm). Cross‐validation equations were developed using the whole spectrum (first to third derivative) and a modified partial least‐square regression method. δ¹³C values and all pools of the RothC model were successfully predicted by NIRS as reflected by RSC values (ratio between standard deviation of the laboratory results and standard error of cross‐validation) ranging from 3.2 to 3.4. Correlations analysis indicated that organic C can be excluded as basis for the successful predictions by NIRS in most cases, i.e., 11 out of 16.     

Purification of chinook salmon (Oncorhynchus tshawytscha) GH for receptor study

A method for the purification of chinook Salmon (Oncorhynchus tshawytscha) GH, which retains its biological activity, is described. The biological activity was investigated with an established radioreceptor assay using liver membranes from pregnant rabbits and bovine GH as standard and labelled hormone. The enrichment of the preparation was checked with electrophoresis (SDS-PAGE). Extraction and further steps were carried out using low molarity alkaline buffer (pH 8–10, M = 100 mM). Three chromatography steps were performed (Concanavalin-A sepharose, Bio-gel P60, DEAE). Ion exchange chromatography was performed under isocratic conditions (using a 50 cm column). Two isoforms (sGH1 and sGH2) were isolated. The purification yield is 0.7% compared to lyophilized pituitaries. The molecule is homogeneous in SDS-PAGE. Contamination by prolactin, gonadotrophin and corticotrophin is negligible (< 0.5%). It could be demonstrated that the biological activity of the preparation is maintained since this preparation stimulates the growth of juvenile trout (Salmo gairdneri) and binds specifically (35%) to trout liver membranes.     

Bison Versus Cattle: Are They Ecologically Synonymous?

Historically, the plains bison (Bison bison Linnaeus) was the most numerous and influential grazer on the Great Plains. Today 500 000 bison occupy North America among more than 100 000 000 cattle. In an attempt to restore their historical ecological role, bison are translocated onto landscapes previously manipulated for cattle use through water and fence development. We hypothesized that bison would use these landscapes similarly to cattle, thus maintaining homogenous grazing and reducing the restoration potential of bison at a landscape scale. We quantified differences between bison populations at different locations and spatial scales (American Prairie Reserve, Malta, Montana, USA, and Grasslands National Park, Val Marie, Saskatchewan, Canada, 2010–2011) and bison and cattle at similar locations and spatial scales using behavioral observations, movement analyses, and resource selection functions. Bison and cattle differed in all behaviors (grazing, standing, bedded, moving, other); however, landscape attributes resulted in behavior differences within species. Cattle spent a higher proportion of time grazing (45–49%) than bison (26–28%) and increased time at water. Bison moved at a 50–99% faster rate than cattle, and first passage time movement analyses identified selection of bison foraging patches (11 690 ha) larger than cattle foraging patches (48–615 ha). Similar to cattle, bison avoided most vegetation communities in relation to riparian communities and selected areas closer to water. Cattle selected for high plant biomass, whereas bison selected for intermediate plant biomass. This study has implications when bison and cattle are used to meet prairie restoration objectives. For bison, large landscapes that include variation in topography and vegetation communities are required. Furthermore, limiting manmade water sources may facilitate bison grazing patterns that more closely approximate historical bison use. For livestock, reduced movement and increased time spent grazing encourage grazing practices that increase heterogeneous grazing at a pasture scale.     

Comparison of the pig and feline models for full thickness corneal transplantation

Purpose The goal of this study was to report on the advantages and limitations of the pig and feline models for experimental in vivo corneal transplantation. Methods Ten healthy domestic pigs and ten healthy cats were used. Full thickness penetrating keratoplasty was performed using autologous (eight cases), allogeneic (seven cases) or human xenogeneic (three cases) tissue. In two other cases, the inflammatory response to partial thickness trephination (without transplantation) was evaluated. Eyes were assessed daily before and after surgery by slit‐lamp, pachymetry, and tonometry. A transparency score ranging from 0 (opaque graft) to 4 (clear graft) was used, based on the slit‐lamp examination. Optical coherence tomography, histology, and electron microscopy were performed postmortem. Results In the pig, the mean (±SD) transparency score for the eight full thickness grafts was 0.88 ± 0.99, ranging from 0 to 3. In the feline model, the mean transparency score for the seven uncomplicated grafts was 3.93 ± 0.19, ranging from 3.5 to 4. Both negative controls without endothelium remained opaque at all time. Intraoperative tendency for iris incarceration into the wound, rapid corneal swelling, suture cheese wiring, and postoperative intraocular inflammation were the main factors jeopardizing the functional success of the corneal transplant in the pig model. Conclusion Suboptimal functional results were obtained after full thickness corneal transplantation in the pig model, while in the feline model, the same protocol yielded uneventful surgeries and clear transplants, with functional results similar to those achieved in human subjects.     

小麦EST—SSRs分子标记的特性及其遗传作图

为了解普通小麦EST来源的微卫星的多样性,从大约1000个包含微卫星的ESTs中设计了300对引物,研究和评估了它们的多态性水平,并且将多态性标记加入到现有的遗传图谱中。在五种不同类型的重复单元中,三个碱基的重复单元出现最多,占到77％。几乎所有的EST—SSRs标记（99．3％）的重复单元都含有G-C碱基对。37．4％的微卫星都是四次重复。对于扩增和多态性,300对引物中有60对没有扩增,21．3％的扩增引物没能产生预期的扩增片断。58％的标记至少在所用8个材料的一个中显示出多态性。W7984和Opata组合表现出最高的多态性水平。大多数普通小麦EST—SSRs标记的重复次数小于10,并且4次重复是最为普遍的。81个新的EST—SSR位点被添加到两个已有的参照遗传图谱中（62个加到ITMI,19个加到CTCS）。研究结果表明小麦EST-SSRs标记展示了一些不同于基因组微卫星的特异特征,在标记发展和其他遗传应用中,这就使得它们能够成为一种非常有价值的资源。