Susceptibility of Eucalyptus grandis and Acacia mearnsii seedlings to five Phytophthora species common in South African plantations

Eucalyptus grandis and its hybrids, as well as Acacia mearnsii, are important non‐native trees commonly propagated for forestry purposes in South Africa. In this study, we conducted pathogenicity trials to assess the relative importance of five commonly isolated Phytophthora spp. (Phytophthora alticola, P. cinnamomi, P. frigida, P. multivora and P. nicotianae) from the plantation environment on E. grandis and A. mearnsii seedlings. Overall E. grandis was more susceptible to the tested Phytophthora spp. than A. mearnsii. Phytophthora cinnamomi was the only pathogen that had a significant negative effect on both the host tree species, leading to a reduction in root and shoot weight as well as to death in the case of E. grandis. Phytophthora alticola and P. nicotianae exclusively affected E. grandis and A. mearnsii, respectively. This study updated the current knowledge on the pathogenicity of Phytophthora spp. on two important non‐native commercially propagated tree species from South Africa.     

An artificial inoculation protocol for Uromycladium acaciae,cause of a serious disease of Acacia mearnsii in southern Africa

Uromycladium acaciae is the cause of a severe wattle rust epidemic in plantations of Acacia mearnsii (black wattle) in southern Africa. Research on the biology of this damaging rust is assisting in the development of control strategies. One strategy under investigation is the identification and deployment of resistant lines of A. mearnsii. Selection of resistant families currently relies on large-scale, time-consuming and expensive field trials. In this study, we present a detailed artificial inoculation protocol for U. acaciae, which can be used to screen for resistance. The results of an experiment that used the protocol to screen the relative resistance of 12 families of A. mearnsii to U. acaciae are also presented. The developed artificial inoculation protocol can also be used to investigate several other aspects of this host–pathogen system.     

A description and evaluation of the physical and financial characteristics of dairy farms operating on soil types classified as poorly drained and associated with high rainfall

The physical and financial performance data used for analysis were obtained over a 6‐year period (2010–2015), from two different databases including a nationally representative data set of dairy farmers and a detailed data set of seven individual farms. Initial analysis indicated significant variations across soil type and region, across a wide range of physical and financial parameters. Further detailed analysis was completed using a group of seven farms participating in a Heavy Soils Programme (HSP), which were compared to different cohorts of the nationally representative database (National Farm Survey [NFS]), ranked on net profit per ha. The HSP farms utilized larger quantities of grass DM per ha per year than the median of the NFS farms, at similar grazing season lengths, but were using lower levels of purchased feed. Economic analysis indicated the HSP farmers achieved significantly lower net profits per hectare to the NFS median group but significantly higher net profits per kg of fat and protein. The HSP farms also achieved significantly greater overall net farm income per year (€83,788), when compared to the median nationally (€67,898), over the 6‐year period (excluding owned land and labour). The mean return on assets ascertained by the HSP farmers was also significantly greater, at 5.75% per year compared to 3.49% achieved by the median of NFS farms. In conclusion, this study has indicated that efficient dairy businesses operating on poorly drained soils can be as profitable as those across all ranges of soil types.     

Identification of powdery mildew resistance loci in wheat by integrating genome-wide association study(GWAS) and linkage mapping

Wheat powdery mildew(Blumeria graminis f.sp.tritici, Bgt) is a disease of increasing importance globally due to the adoption of high yielding varieties and modern sustainable farming technologies.Growing resistant cultivars is a preferred approach to managing this disease, and novel powdery mildew resistance genes are urgently needed for new cultivar development.A genome-wide association study was performed on a panel of 1292 wheat landraces and historical cultivars using 5011 single nucleotide polymorphism(SNP)markers.The association panel was evaluated for reactions to three Bgt inoculants, OKS(14)-B-3-1, OKS(14)-C-2-1, and Bgt15.Linkage disequilibrum(LD) analysis indicated that genome-wide LD decayed to 0.1 at 23 Mb, and population structure analysis revealed seven subgroups in the panel.Association analysis using a mixed linear model(MLM) identified three loci for powdery mildew resistance on chromosome 2 B, designated QPm.stars-2BL1,QPm.stars-2BL2, and QPm.stars-2BL3.To evaluate the efficacy of GWAS in gene discovery,QPm.stars-2BL2 was validated using F2 and F2:3 populations derived from PI420646 × OK1059060-126135-3.Linkage analysis delimited the powdery mildew resistance gene in PI 420646 to an interval where QPm.stars-2BL2 was located, lending credence to the GWAS results.QPm.stars-2BL1 and QPm.stars-2BL3, which were associated with four SNPs located at 457.7–461.7 Mb and two SNPs located at 696.6–715.9 Mb in the Chinese Spring reference IWGSC RefSeq v1.0, respectively, are likely novel loci for powdery mildew resistance and can be used in wheat breeding to improve powdery mildew resistance.     

Short-term effects of organo-mineral enriched biochar fertiliser on ginger yield and nutrient cycling

Purpose

Biochar has agronomic potential but currently is too expensive for widespread adoption. New methodologies are emerging to reduce the cost such as enriching biochar with nutrients that match crops and soil requirements. However, the effects of biochar-based fertilisers on plant yield and soil nutrient availability have not been widely examined. This study investigated the effects of a novel organo-mineral biochar fertiliser in comparison to organic and commercial biochar fertiliser on ginger (Zingiber officinale Canton).

Materials and methods

There were four treatments: (1) commercial organic fertiliser (5 t ha^?1), as the control; (2) commercial biochar-based fertiliser (5 t ha^?1); (3) organo-mineral biochar fertiliser at low rate (3 t ha^?1); and (4) organo-mineral biochar fertiliser at high rate (7.5 t ha^?1). A replicated pot trial was established with black dermosol soil and ten replicate pots for each treatment. Ginger was planted and grown for 30 weeks. Plant growth, biomass, foliar nutrients and water extractable soil nutrients including phosphorus (P), potassium (K) and calcium (Ca) were examined.

Results and discussion

High rate organo-mineral biochar fertiliser increased soil P and K availability at week 30 (harvest) after planting, compared to all other treatments and low rate organo-mineral biochar fertiliser performed similarly to the organic control for P and K. High rate organo-mineral biochar fertiliser increased total foliar nutrient content at week 30 in P, K and Ca compared to commercial biochar fertiliser. High rate organo-mineral biochar fertiliser improved the commercial value of ginger (+?36%) due to a shift in the proportion of higher grade rhizomes. Low rate organo-mineral biochar fertiliser plants displayed similar yield, total dry and aboveground biomass to commercial organic fertiliser. Commercial biochar fertiliser had significantly lower biomass measures compared with other treatments as the rate applied had lower nutrient concentrations.

Conclusions

Our results show organo-mineral biochar fertilisers could be substituted for commercial organic fertilisers at low rates to maintain similar yield or applied at high rates to increase commercial value where economically feasible.

     

A comparison of four dietary assessment methods in materially deprived households in England

OBJECTIVES: Low-income households in the UK concentrate factors associated with poor record-keeping such as lower literacy, numeracy and English language skills. The present study aimed to (1) compare the validity and acceptability of three dietary survey methods against appropriate reference measures and (2) identify a method which was both valid and acceptable in low-income households. DESIGN: Cross-sectional design comparing three 4-day dietary survey methods (multiple-pass 24-hour recall, food checklist and semi-weighed method) against a 4-day weighed inventory and other reference measures within subjects. SETTING: London, UK, 2001. SUBJECTS: Low-income households were selected using a doorstep screening questionnaire in 18 of the 60 most deprived neighbourhoods in London. Results are based on 384 respondents (159 males, 225 females) aged 2-90 years in 240 households. Respondents were mainly White (48%), Black or Black British (31%) or Asian or Asian British (9%). RESULTS: The dietary survey method preferred by interviewers was the 24-hour recall. Most respondents preferred the food checklist. Compared with the weighed inventory, repeat 24-hour recalls and the food checklist yielded higher estimates of energy and nutrient intakes. The semi-weighed method was least liked and yielded the lowest estimates of intake. CONCLUSIONS: Based partly on evidence presented here and partly on evidence to be presented in later publications, four multiple-pass 24-hour recalls were recommended as the most appropriate method for a national study of diet and nutrition in low-income households in the UK.     

A landscape model for quantifying the trade-off between conservation needs and economic constraints in the management of a semi-natural grassland community

We present a landscape model to investigate the ecological consequences and costs of different management regimes in semi-natural grasslands. The model integrates dynamic abiotic conditions, management (i.e. disturbance) regime and response of more than 50 characteristic plant and insect species by modelling the dynamics of relevant niche parameters as predictors for species distribution models. We compare our results for exemplary scenarios differing in spatial and temporal scales and exemplary species belonging to different functional groups through several steps of aggregation.Our analysis aims at the question whether an infrequent massive disturbance by rototilling can serve as a less expensive alternative to annual mowing for preserving the characteristic species composition of open dry grasslands in Southern Germany. Rototilling results in a shifting mosaic determining the habitat quality for plant and animal species that may reduce the survival of local or regional populations.For some meadow species as well as the encroaching shrub species, rototilling has a detrimental effect on regional habitat quality. Other species, e.g. weeds and annual pioneers, strongly benefit or show only negligible reaction. Since this is a multi-objective problem, there is a no magic bullet in selecting an optimum scenario of measures. But by visualising the trade-off between ecological consequences and costs, our model is a valuable tool for conservation managers providing a sound scientific basis for management decisions relying on available ecological knowledge. It is also an interesting example for a model describing complex communities in a relatively simple way, simultaneously considering the main driving factors.     

Pomegranate phenolics from the peels, arils, and flowers are antiatherogenic: studies in vivo in atherosclerotic apolipoprotein e-deficient (E 0) mice and in vitro in cultured macrophages and lipoproteins

We have analyzed in vivo and in vitro the antiatherogenic properties and mechanisms of action of all pomegranate fruit parts: peels (POMxl, POMxp), arils (POMa), seeds (POMo), and flowers (POMf), in comparison to whole fruit juice (PJ). Atherosclerotic E 0 mice consumed POM extracts [200 microg of gallic acid equivalents (GAE)/mouse/day] for 3 months. Blood samples, peritoneal macrophages (MPM), and aortas were then collected. All POM extracts possess antioxidative properties in vitro. After consumption of PJ, POMxl, POMxp, POMa, or POMf by E (0) mice, the atherosclerotic lesion area was significantly decreased by 44, 38, 39, 6, or 70%, respectively, as compared to placebo-treated group, while POMo had no effect. POMf consumption reduced serum lipids, and glucose levels by 18-25%. PJ, POMxl, POMxp, POMf, or POMa consumption resulted in a significant decrement, by 53, 42, 35, 27, or 13%, respectively, in MPM total peroxides content, and increased cellular paraoxonase 2 (PON2) activity, as compared to placebo-treated mice. The uptake rates of oxidized-LDL by E (0)-MPM were significantly reduced by approximately 15% after consumption of PJ, POMxl, or POMxp. Similar results were obtained on using J774A.1 macrophage cell line. Finally, pomegranate phenolics (punicalagin, punicalin, gallic acid, and ellagic acid), as well as pomegranate unique complexed sugars, could mimic the antiatherogenic effects of pomegranate extracts. We conclude that attenuation of atherosclerosis development by some of the POM extracts and, in particular, POMf, could be related to the combined beneficial effects on serum lipids levels and on macrophage atherogenic properties.     

Latent and active polyphenol oxidase (PPO) in red clover (Trifolium pratense) and use of a low PPO mutant to study the role of PPO in proteolysis reduction

Polyphenol oxidase (PPO) activity in leaf extracts of wild type (WT) red clover and a mutant line expressing greatly reduced levels of PPO (LP red clover) has been characterized. Both latent and active forms of PPO were present, with the latent being the predominant form. PPO enzyme and substrate (phaselic acid) levels fluctuated over a growing season and were not correlated. Protease activation of latent PPO was demonstrated; however, the rate was too low to have an immediate effect following extraction. A novel, more rapid PPO activation mechanism by the enzyme's own substrate was identified. Rates of protein breakdown and amino acid release were significantly higher in LP red clover extracts compared with WT extracts, with 20 versus 6% breakdown of total protein and 1.9 versus 0.4 mg/g FW of free amino acids released over 24 h, respectively. Inclusion of ascorbic acid increased the extent of protein breakdown. Free phenol content decreased during a 24 h incubation of WT red clover extracts, whereas protein-bound phenol increased and high molecular weight protein species were formed. Inhibition of proteolysis occurred during wilting and ensilage of WT compared with LP forage (1.9 vs 5 and 17 vs 21 g/kg of DM free amino acids for 24 h wilted forage and 90 day silage, respectively). This study shows that whereas constitutive red clover PPO occurs predominantly in the latent form, this fraction can contribute to reducing protein breakdown in crude extracts and during ensilage.