Genetic and immunobiological diversities of porcine reproductive and respiratory syndrome genotype I strains

Genetic diversity of porcine reproductive and respiratory syndrome virus (PRRSV) has been based on ORF5/GP5 and ORF7/N protein variations. Complete viral genome studies are limited and focused on a single or a few set of strains. Moreover, there is a general tendency to extrapolate results obtained from a single isolate to the overall PRRSV population. In the present study, six genotype-I isolates of PRRSV were sequenced from ORF1a to ORF7. Phylogenetic comparisons and the variability degree of known linear B-epitopes were done considering other available full-length genotype-I sequences. Cytokine induction of all strains was also evaluated in different cellular systems. Non structural protein 2 (nsp2) was the most variable part of the virus with 2 out of 6 strains harboring a 74 aa deletion. Deletions were also found in ORF3 and ORF4. Phylogenetic analyses showed that isolates could be grouped differently depending on the ORF examined and the highest similarity with the full genome cluster was found for the nsp9. Interestingly, most of predicted linear B-epitopes in the literature, particularly in nsp2 and GP4 regions, were found deleted or varied in some of our isolates. Moreover, 4 strains, those with deletions in nsp2, induced TNF-α and 3 induced IL-10. These results underline the high genetic diversity of PRRSV mainly in nsp1, nsp2 and ORFs 3 and 4. This variability also affects most of the known linear B-epitopes of the virus. Accordingly, different PRRSV strains might have substantially different immunobiological properties. These data can contribute to the understanding of PRRSV complexity.     

Risk factors for stillbirths in two swine farms in the south of Brazil

We evaluated stillbirth risk factors in two commercial swine farms of the Rio Grande do Sul State (south of Brazil). The study was conducted during 1 month in Farm A and during 2 months in Farm B, both during 1999. Data for all farrowings that occurred during the study period were recorded (101 for Farm A and 373 for Farm B), without interference in the farm management. In Farm A, 39% of all litters born during the period of interest had stillborn piglets and the stillborn risk for piglets was 12%. In Farm B, 25% of all litters had stillborn piglets whereas the stillborn risk was 2%. Variables considered as potential risk factors for stillbirths were: parity (1, 2–3, 4+); breed (purebred or crossbred); sow body-condition (normal or fat); use of oxytocin during parturition (yes or no); obstetric intervention through vaginal palpation (yes or no); farrowing duration (<4 or ≥4 h); mummified fetuses (yes or no); total litter size (<12 or ≥12 piglets); and litter birth weight (<11 or ≥11 kg). All stillborn piglets had their classification validated by necropsy. In multivariable logistic-regressions, the cases were the litters having at least one stillborn piglet. In Farm A, litters having at least 12 pigs and in which oxytocin was used during the parturition had 20.8-times-higher odds of stillborn occurrence. In Farm B, litters from sows having parity ≥4 had 2.2-times-higher odds of stillborn occurrence than litters from parity 2 to 3 females, litters having ≥12 pigs had 2.0-times-higher odds of a stillborn piglet than smaller litters and farrowings in which vaginal palpation was performed had 8.0-times-higher odds. Farrowing room management to minimize stillborn risk should target higher-parity females, large litters and optimization of practices of obstetric interventions.     

Optimizing early detection of avian influenza H5N1 in backyard and free-range poultry production systems in Thailand

For infectious diseases such as highly pathogenic avian influenza caused by the H5N1 virus (A/H5N1 HP), early warning system is essential. Evaluating the sensitivity of surveillance is a necessary step in ensuring an efficient and sustainable system. Stochastic scenario tree modeling was used here to assess the sensitivity of the A/H5N1 HP surveillance system in backyard and free-grazing duck farms in Thailand. The whole surveillance system for disease detection was modeled with all components and the sensitivity of each component and of the overall system was estimated. Scenarios were tested according to selection of high-risk areas, inclusion of components and sampling procedure, were tested. Nationwide passive surveillance (SSC1) and risk-based clinical X-ray (SSC2) showed a similar sensitivity level, with a median sensitivity ratio of 0.96 (95% CI 0.40-15.00). They both provide higher sensitivity than the X-ray laboratory component (SSC3). With the current surveillance design, the sensitivity of detection of the overall surveillance system when the three components are implemented, was equal to 100% for a farm level prevalence of 0.05% and 82% (95% CI 71-89%) for a level of infection of 3 farms. Findings from this study illustrate the usefulness of scenario-tree modeling to document freedom from diseases in developing countries.     

Tall fescue forage mass in a grass-legume mixture: predicted efficiency of indirect selection

High fertilizer prices and improved environmental stewardship have increased interest in grass-legume mixed pastures. It has been hypothesized, but not validated, that the ecological combining ability between grasses and legumes can be improved by breeding specifically for mixture performance. This experiment examined the predicted efficiency of selection in a grass monoculture environment to indirectly improve tall fescue (Lolium arundinaceum (Schreb.) Darbysh.) forage mass in a grass-legume mixture. Heritability, genetic and rank correlations, and selection efficiencies were estimated for forage mass in a tall fescue half-sib population grown as spaced-plants overseeded with either turf-type tall fescue (monoculture) or alfalfa (mixture). Heritability for tall fescue forage mass in monoculture ranged from 0.32 to 0.70 and were always similar or greater than those in mixture (range 0.27–0.55) for four successive harvests and annual total. Genetic correlations between monoculture and mixture tall fescue forage mass varied with values of 0.48, 0.92, ?0.31, 0.70, and 0.25 in June, July, August, October, and annual total, respectively. Indirect selection efficiencies exceeded or approached direct selection for mixtures only in July and October (1.29, and 0.73, respectively). Whereas, indirect selection efficiencies were low in June, August, and annual forage mass (0.58, ?0.31, and 0.28, respectively). Moreover, low Spearman’s rank correlations (?0.03 to 0.35) indicated differing half-sib family performance between the monoculture and mixture environments. Results indicate that direct selection should be used to improve tall fescue forage mass in a grass-legume mixture, and support the hypothesis of increasing ecological combining ability by breeding for mixtures per se.     

Laparoscopic nephron-sparing surgery for the treatment of canine dioctophymosis

This paper reports on two cases of laparoscopic nephrotomy employed in the treatment of canine dioctophymosis, which is considered a unusual procedure and a new treatment proposal heretofore not performed in veterinary medicine. Two patients were treated, one with a history of hematuria and the other with incidental finding of the parasite in the abdominal cavity during elective ovariohysterectomy. Both dogs were subjected to abdominal ultrasound, which produced images indicating the presence of the parasite in the right side kidney, but with partial parenchymal preservation. The patients were therefore subjected to laparoscopic nephrotomy. The surgical procedure was effective in treating dioctophymosis and enabled minimum tissue invasion during surgery, in addition to preservation of the kidney.     

A geographical approach to identify phosphorus-efficient genotypes among landraces and wild ancestors of common bean

Cultivars of common bean (Phaseolus vulgaris L.) capable of yielding well at low levels of native or added phosphorus (P) are highly desirable in many tropical production systems. The objective of the present study was to identify geographical regions which might be sources of such genotypes. A total of 364 landraces, cultivars and wild genotypes, drawn from a broad geographic range, were divided on the basis of growth habit into four field trials, each comprising two levels of P, stressed and unstressed, on an infertile Andosol in Popayan, Colombia. The regression relationship between grain yield per plant in the presence and in the absence of stress was determined, and each genotype's deviation from this relationship was used as a measure of P-efficiency. There was highly significant variation in efficiency among genotypes in all growth habits, and in climbing beans there were consistent regional differences, superior genotypes being identified with greater frequency among those from Bolivia, West Mexico and South Mexico-West Guatemala. The latter region was promising for prostrate bush genotypes also. Wild beans in general performed relatively poorly; it appears that P-efficiency traits in P. vulgaris have been acquired during or after domestication. These results confirm that genetic differences in P-efficiency exist among common bean genotypes and suggest that these are related to geographic origin. Furthermore, the use of a representative sample of germplasm can help to identify segments of the gene bank that are especially promising as sources of desirable traits. This revised version was published online in July 2006 with corrections to the Cover Date.     

Mineral element concentrations in grains of Chinese wheat cultivars

Investigations on concentration of mineral elements including Fe and Zn in wheat grains are important for human health. Two hundreds and sixty-five cultivars and advanced lines were collected and sown at Anyang experimental station of the Institute of Crop Science of the Chinese Academy of Agriculture Sciences in season 2005–2006 to evaluate the genetic variation of major mineral element concentrations in wheat grain. Twenty-four selected cultivars were also planted at seven representative locations in seasons 2005–2006 and 2006–2007 to evaluate the effects of genotype, environment, and genotype by environment interaction on mineral element concentrations. The 265 genotypes displayed a large variation for all mineral elements investigated including Fe and Zn, ranging from 28.0 to 65.4 mg kg⁻¹ and 21.4 to 58.2 mg kg⁻¹ for Fe and Zn, with mean values of 39.2 and 32.3 mg kg⁻¹, respectively. Jimai 26, Henong 326, and Jingdong 8 displayed high Fe and Zn concentrations, and Jimai 26 and Henong 326 also displayed high concentrations of Cu, Mg, K, P, and protein content. Jingdong 8 is the most promising leading cultivar for increasing Fe and Zn concentrations. All mineral element concentrations including Fe and Zn were largely influenced by environment effects. Production of high Fe concentration can be best secured at Jiaozuo and Jinan, and high Zn concentration can be best secured at Jinan and Xuzhou, since samples from these locations in the two seasons are characterized by high Fe or Zn concentration, compared with the other locations. High and significant genotype by environment interaction effects on all mineral element concentrations were also observed, with ratios of genotype by environment to genotype variances all larger than 1.20. Grain Fe concentration was highly significant and positively correlated with that of Zn, indicating a high possibility to combine high Fe and Zn traits in wheat breeding. It also indicated strong positive correlations between concentrations of Fe, Zn, and protein content.