Crystal structure of the RC-LH1 core complex from Rhodopseudomonas palustris

The crystal structure at 4.8 angstrom resolution of the reaction center-light harvesting 1 (RC-LH1) core complex from Rhodopseudomonas palustris shows the reaction center surrounded by an oval LH1 complex that consists of 15 pairs of transmembrane helical alpha- and beta-apoproteins and their coordinated bacteriochlorophylls. Complete closure of the RC by the LH1 is prevented by a single transmembrane helix, out of register with the array of inner LH1 alpha-apoproteins. This break, located next to the binding site in the reaction center for the secondary electron acceptor ubiquinone (UQB), may provide a portal through which UQB can transfer electrons to cytochrome b/c1.     

Crop management based on field observations: Case studies in sugarcane and coffee

For millennia farmers have continually improved their crop management and production practices through their observations and experience. More recently modern science and research methods based on controlled experiments became the most visible instrument of technological change in agriculture, nevertheless farmers continued to develop and implement new technologies based on their own observations made under commercial conditions. Modern information technology and social organization of producers make it possible to use operational research, which is based on the observation and analysis of operations so as to improve them, to manage crops better. The article describes two cases, coffee and sugarcane, in which observation of the results obtained by farmers, with the natural variation in the environment and the distinct management practices they apply can be used to determine site specific crop management practices. The basis of the methodology is to (a) obtain data from a series of cropping events that characterizes the conditions under which each crop is grown, how it is managed and how it performs under commercial conditions (data capture), (b) to manage and analyze the data in centralized databases (data management and analysis) and (c) make the information derived from the data analysis available to growers so that they can use it to make better informed decisions (interpretation). All aspects of the methodology depend on the social organization of the growers and the supply chain of which they form a part, and hence social organization is an integral part of the methodology.The processes of characterization of the growing conditions, including both environmental and management parameters, the establishment of databases, the data analysis and interpretation, and mechanisms of interacting with producers are described with emphasis on the importance of social organization and farmers’ groups. Examples are given of how this approach can be used to better understand the crop response to variation in the environment and management, and how this can be used by farmers to improve productivity and quality in two contrasting crops. The paper demonstrates that operational research can be used to evaluate farmers’ experiences and to share that knowledge amongst them so as to improve their production practices in the context of their particular environment. It is suggested that the operation research approach is particularly effective in heterogeneous landscapes with perennial crops that have not been the subject of intense research. Furthermore operational research is effective in determining the crop response to variables that are not readily studied in small plots and in determining optimal combinations of multiple variables. Producers believe in the results obtained as there are none of the problems of scaling up from experimental plots to commercial conditions. It is proposed that the approaches described can readily be applied to other crop species.     

Ocean energy: forms and prospects

The nature and distribution of power sources of the sea other than petroleum are discussed, along with possible entrées for their use. Waves, tides, currents, and salinity and temperature gradients all have the potential to contribute useful power. Submarine geothermal sources, salt domes, ice, and other marine-associated concentrations may be more important. There are opportunities to employ these marine power resources directly rather than for contributions to power grids or power-intensive products. Ancillary employment of the seawater as a coolant and of the sediments below the seabed for the disposal of nuclear wastes may be even more important uses than employment of the power that the sea contains.     

Evaluation of Serum and Seminal Plasma Markers in the Diagnosis of Canine Prostatic Disorders

Serum and seminal plasma concentrations or activities of acid phosphatase (AP), prostate specific antigen (PSA), and canine prostate specific esterase (CPSE) were measured in normal dogs, dogs with benign prostatic hyperplasia (BPH), dogs with bacterial prostatitis, and dogs with prostatic carcinoma to determine if these assays would be of value in differentiating dogs with prostatic carcinoma from normal dogs, and dogs with other prostatic disorders. In addition, tissue sections of prostatic adenocarcinomas were stained with antiprostatic AP, anti-CPSE, and anti-PSA antibodies to determine if these would be suitable immunohistochemical markers of prostatic carcinoma. Prostate-specific antigen was not detected in canine serum or seminal plasma. Serum and seminal AP activities did not differ significantly between normal dogs and those with prostatic diseases, or among dogs with different prostatic disorders. Serum CPSE activities were significantly higher in dogs with BPH than in normal dogs. Mean serum CPSE activities in dogs with BPH, bacterial prostatitis, and prostatic carcinoma were not significantly different from each other. Slight to moderate immunohistochemical staining of canine prostatic adenocarcinomas was noted for prostatic AP and PSA; most tumors did not stain for CPSE. These results show that proteins of prostatic origin appear in the serum of dogs as a result of prostatic pathology, especially BPH. Canine prostatic adenocarcinoma does not appear to be associated with significant increases in CPSE or AP activities, possibly because of down-regulation of these enzymes by prostatic carcinoma cells. It is also possible that failure to detect significant differences resulted from limited statistical power for some groups and pairwise analyses because of the small number of dogs evaluated.     

Behavioural response of Colorado potato beetle (Leptinotarsa decemlineata) larvae to selected plant extracts

Potato leaves were treated with 2, 20 or 200 g kg(-1) solutions of extracts of five plant species collected in Turkey, and then exposed to larvae of Colorado potato beetle, Leptinotarsa decemlineata (Say). During the first 24 h of exposure, leaf consumption was not affected by 2 g kg(-1) extracts, whereas significantly more leaf tissue remained on leaves treated with 20 g kg(-1) extracts of Arctium lappa L., Bifora radians M Bieb, Humulus lupulus L. or Xanthium strumarium L. than on untreated control leaves. Feeding was not affected by the 20 g kg(-1) extract of Verbascum songaricum Schrenk ex Fisch & Mey. Extracts of all species at 200 g kg(-1) reduced larval feeding, with H. lupulus and X. strumarium providing the greatest protection. Observations of larval behaviour over the first 15 min of exposure to these extracts revealed that the interaction of beetles with leaf tissue was significantly affected by plant extracts. Feeding frequency was not affected by 2 g kg(-1) extracts but was reduced by all higher concentrations. Feeding was inhibited completely by 20 g kg(-1) of H. lupulus extract and reduced significantly compared with the controls by all other extracts. Suppression of feeding was caused by all extracts at 200 g kg(-1), with V. songaricum providing 91% reduction in feeding duration. Rejection behaviour, in which larvae did not return to the leaf after their interaction with it, was rare on 2 g kg(-1) extracts but seen in over 60% of larvae on 20 g kg(-1) extracts and over 80% on 200 g kg(-1) extracts. The present results demonstrate that these extracts have significant ability to protect potato leaves for up to 24 h by prevention of feeding behaviour by L. decemlineata. Further studies are needed to determine the potential of these plant extracts, or their active components, for use in biologically based pest management strategies.     

Laboratory survival of Drosophila suzukii under simulated winter conditions of the Pacific Northwest and seasonal field trapping in five primary regions of small and stone fruit production in the United States

BACKGROUND: Drosophila suzukii was first found in Oregon in August 2009. The threat of this pest to regional small and stone fruit production industries led to investigations on its overwintering capabilities in fruit‐growing regions in the Pacific Northwest. Knowledge of its cold tolerance will help in the development of computer models to forecast seasonal population growth and decline. RESULTS: Of 1500 adults or pupae, 22 (1.4%) individuals survived the 84 day experimental chilling period. Most (86%) of the survivors were subjected to 10 °C temperature treatments. Survival decreased significantly at lower temperature treatments. Freezing temporarily increased the mortality rate but did not significantly affect overall mortality over the trial period. Flies that emerged from pupae are estimated to survive for up to 103–105 days at 10 °C and for shorter periods at lower temperatures. Field trapping in five fruit production areas has demonstrated overwintering survival in California and Oregon, but lower survival is predicted in Eastern Washington and Michigan. CONCLUSION: The experiments reported here indicate that long‐term survival of D. suzukii is unlikely at temperatures below 10 °C. Field data from five climatic regions indicated extended low initial D. suzukii field presence in 2010 in all regions except California, where field presence was recorded earlier. Copyright © 2011 Society of Chemical Industry     

Giant amphipod from the abyssal pacific ocean

A baited camera has recorded a lysianassid amphipod that is twice as large as the largest amphipod previously recorded. The locality for this mobile omnivore is the sterile bottom of the eastern North Pacific Ocean, at a depth of 5304 meters.