A "Schrodinger Cat" Superposition State of an Atom

A "Schrodinger cat"-like state of matter was generated at the single atom level. A trapped 9Be+ ion was laser-cooled to the zero-point energy and then prepared in a superposition of spatially separated coherent harmonic oscillator states. This state was created by application of a sequence of laser pulses, which entangles internal (electronic) and external (motional) states of the ion. The Schrodinger cat superposition was verified by detection of the quantum mechanical interference between the localized wave packets. This mesoscopic system may provide insight into the fuzzy boundary between the classical and quantum worlds by allowing controlled studies of quantum measurement and quantum decoherence.     

The Genome sequence of the SARS-associated coronavirus

We sequenced the 29,751-base genome of the severe acute respiratory syndrome (SARS)-associated coronavirus known as the Tor2 isolate. The genome sequence reveals that this coronavirus is only moderately related to other known coronaviruses, including two human coronaviruses, HCoV-OC43 and HCoV-229E. Phylogenetic analysis of the predicted viral proteins indicates that the virus does not closely resemble any of the three previously known groups of coronaviruses. The genome sequence will aid in the diagnosis of SARS virus infection in humans and potential animal hosts (using polymerase chain reaction and immunological tests), in the development of antivirals (including neutralizing antibodies), and in the identification of putative epitopes for vaccine development.     

Cooperation of GGAs and AP-1 in packaging MPRs at the trans-Golgi network

The Golgi-localized, gamma-ear-containing, adenosine diphosphate ribosylation factor-binding proteins (GGAs) are multidomain proteins that bind mannose 6-phosphate receptors (MPRs) in the Golgi and have an essential role in lysosomal enzyme sorting. Here the GGAs and the coat protein adaptor protein-1 (AP-1) were shown to colocalize in clathrin-coated buds of the trans-Golgi networks of mouse L cells and human HeLa cells. Binding studies revealed a direct interaction between the hinge domains of the GGAs and the gamma-ear domain of AP-1. Further, AP-1 contained bound casein kinase-2 that phosphorylated GGA1 and GGA3, thereby causing autoinhibition. This could induce the directed transfer of the MPRs from GGAs to AP-1. MPRs that are defective in binding to GGAs are poorly incorporated into AP-1-containing clathrin-coated vesicles. Thus, the GGAs and AP-1 interact to package MPRs into AP-1-containing coated vesicles.     

Investigation of Johne's disease in Tasmanian fallow deer (Dama dama)

In 2012 when many sheep flocks in northern‐central Tasmania were experiencing a high prevalence of ovine Johne's disease, 34 wild adult fallow deer shot on or near infected properties were negative to microscopic Mptb lesions of the ileo‐caecal valve, terminal ileum and ileo‐caecal lymph nodes. This study demonstrated 95% confidence of detecting Johne's disease in this fallow deer population if ≥10% of animals were shedding Mycobacterium avium subsp. paratuberculosis in their faeces, or if ≥21% of animals were sub‐clinically infected.     

Hydrolysate preparation for analysis of amino acids in sorghum grains: effect of oxidative pretreatment

Sorghum samples were either untreated or oxidized with performic acid (PA) before hydrolysis, and their amino acid contents were determined by cation exchange chromatography using an amino acid analyzer. HCl was used to destroy excess PA. Oxidative pretreatment of the samples resulted in increased yields of Cys (as cysteic acid), Met (as Met dioxide), and His, destroyed Tyr and Phe, and resulted in the appearance of an extraneous peak which most likely consisted of halogenation by-products (HBP) of Tyr and Phe. The destruction of Tyr and Phe occurred despite the presence of phenol, a halogen scavenger, in both the PA and hydrolysis reagents. The higher His values observed in all oxidized samples most likely resulted from the co-elution of His with Tyr and Phe HBP. It was concluded that the complete (except Trp) amino acid content of a feedstuff cannot be accurately determined from only one oxidized hydrolysate preparation by using this particular procedure.     

The effects of invasive North American beavers on riparian plant communities in Cape Horn, Chile: Do exotic beavers engineer differently in sub-Antarctic ecosystems?

North American beavers (Castor canadensis) were introduced into southern South America in 1946. Since that time, their populations have greatly expanded. In their native range, beavers shape riparian ecosystems by selectively feeding on particular plant species, increasing herbaceous richness and creating a distinct plant community. To test their effects as exotic engineers on sub-Antarctic vegetation, we quantified beaver impacts on tree canopy cover and seedling abundance and composition, as well as their impacts on herbaceous species richness, abundance and composition on Navarino Island, Cape Horn County, Chile (55°S). Beavers significantly reduced forest canopy up to 30 m away from streams, essentially eliminating riparian forests. The tree seedling bank was greatly reduced and seedling species composition was changed by suppressing Nothofagus betuloides and Nothofagus pumilio, but allowing Nothofagus antarctica. Herbaceous richness and abundance almost doubled in meadows. However, unlike beaver effects on North American herbaceous plant communities, much of this richness was due to invasion by exotic plants, and beaver modifications of the meadow vegetation assemblage did not result in a significantly different community, compared to forests. Overall, 42% of plant species were shared between both habitat types. Our results indicate that, as predicted from North American studies, beaver-engineering increased local herbaceous richness. Unlike in their native range, though, they did not create a unique plant community in sub-Antarctic landscapes. Plus, the elimination of Nothofagus forests and their seedling bank and the creation of invasion pathways for exotic plants together threaten one of the world’s most pristine temperate forest ecosystems.     

Echinococcus granulosus in the Northern Territory,Australia: hydatid disease reported in beef cattle from the region

Hydatid disease in beef cattle has been reported to be widespread throughout Australia, but cattle bred and raised in the Northern Territory were previously believed to be free of the disease. Between 2010 and 2016, 1061 cattle from the Northern Territory were slaughtered at a New South Wales abattoir and inspected for hydatid disease. The proportion of cattle reported infected with hydatid disease was 3.5%. Individual cattle identification numbers indicated that the cattle included in the study had most likely remained within the Northern Territory from birth until immediately prior to slaughter, so were assumed to have become infected within the region. We suspect that the sylvatic cycle of Echinococcus granulosus transmission could be responsible for infection of cattle in this region.