Asymmetry of lineages and the direction of evolutionary time

Evolutionary time has a characteristic direction as demonstrated by the asymmetry of clade diversity diagrams in large statistical samples. Evolutionary groups generally concentrate diversity during their early histories, producing a preponderance of bottom-heavy clades among those that arise early in the history of a larger group. This pattern holds across taxonomic levels and across differences in anatomy and ecology (marine invertebrates, terrestrial mammals). The quantitative study of directionality in life's history (replacing vague, untestable, and culturally laden notions of "progress") should receive more attention from paleobiologists.     

Assessing compensation for insect damage in mixed plantings of resistant and susceptible potatoes

Plant mixtures have been proposed for pesticidal transgenic potatoes as a means to reduce selection intensity favoring resistant insect genotypes. Colorado potato beetle,Leptinotarsa decemlineata (Say), defoliation was simulated in mixed plantings of susceptible and resistant potato “mimics” to evaluate yield compensation. Various mixtures of susceptible and resistant potato were planted at two densities and two locations in eastern North Carolina. Resistant plants were undamaged throughout the season whereas susceptible plants were completely defoliated by hand either during early or late bloom. The ability of non-defoliated plants to compensate for neighboring defoliated plants was investigated through single-plant and smallplot field experiments for 2 years. Yield compensation for defoliated plants by neighboring non-defoliated plants was not evident in our studies. Yield of two potato plants, positioned on either side of a defoliated plant, was not different from yield of two potato plants positioned on either side of a non-defoliated potato plant. Compensation in mixtures of resistant and susceptible potato was not evident using several non-linear regression analyses. A negative linear relationship existed between yield and an increasing percent of susceptible plants in the mixture for all planting densities, at each location, every year.     

The role of population and quantitative genetics and modern sequencing technologies to understand evolved herbicide resistance and weed fitness

Evolution of resistance to multiple herbicides with different sites of action and of nontarget site resistance (NTSR) often involves multiple genes. Thus, single‐gene analyses, typical in studies of target site resistance, are not sufficient for understanding the genetic architecture and dynamics of NTSR and multiple resistance. The genetics of weed adaptation to varied agricultural environments is also generally expected to be polygenic. Recent advances in whole‐genome sequencing as well as bioinformatic and statistical tools have made it possible to use population and quantitative genetics methods to expand our understanding of how resistance and other traits important for weed adaptation are genetically controlled at the individual and population levels, and to predict responses to selection pressure by herbicides and other environmental factors. The use of tools such as quantitative trait loci mapping, genome‐wide association studies, and genomic prediction will allow pest management scientists to better explain how pests adapt to control tools and how specific genotypes thrive and spread across agroecosystems and other human‐disturbed systems. The challenge will be to use this knowledge in developing integrated weed management systems that inhibit broad resistance to current and future weed‐control methods. © 2020 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.     

Ecosystem-level dynamics of soil-vegetation features, with implications for conserving a narrowly endemic reptile

Narrow endemism presents challenges to species occurrence modeling particularly when the distribution of key local habitat features changes across space and time as a function of processes operating at larger scales. One need facing conservation in such settings is a better understanding of the biogeographic dynamics of the larger features that govern occurrence of critical local habitat. The Mescalero–Monahans shinnery sands region of western North America is a dynamic landscape where sand shinnery oak interacts with wind-driven sand to establish dune habitat. This ecosystem supports several narrowly endemic dune-dwelling species including the dunes sagebrush lizard. Using near-anniversary satellite and aerial imagery from 1986, 1998, and 2011, we integrated object-based image classification and statistical analysis to develop and validate a spatially explicit estimate of the sand shinnery oak ecosystem, including dynamics associated with its attrition and emergence, at high resolution throughout an 89,849-km² study area encompassing the range of the dunes sagebrush lizard. The spatial estimate of the distribution and extent of the sand shinnery oak soil-vegetation association validated reasonably well (overall accuracy = 0.79; sensitivity = 0.49; specificity = 0.91) and showed that the association declined 10.3 % in extent during the 25-year assessment window. The presence of sand shinnery oak, patch size, and patch isolation were dynamic across space and time; a regression model showed that smaller, isolated patches on the periphery of the system were more likely to be lost over time whereas larger, less isolated, and centrally distributed patches were more likely to persist or expand. This study details broadly applicable methods to accurately delineate landforms throughout large extents, and offers mapping tools specific to issues surrounding Mescalero–Monahans shinnery sands endemics that are readily amenable to testing, refinement, and application in efforts to focus sustainable landscape management including conservation of endemic species.     

Defining protected area boundaries based on vascular-plant species richness using hydrological information derived from archived satellite imagery

Surface and near-surface hydrological conditions are not generally considered in the selection of protected-area boundaries; however, these hydrological conditions may be critical in the maintenance of hydrologically driven biodiversity areas and should factor heavily in systematic conservation planning and impact-mitigation efforts. Here we demonstrate the use of Synthetic Aperture Radar (SAR) satellite imagery to model surface and near-surface hydrological dynamics and related vascular-plant species richness surrounding Sundance Provincial Park, Alberta, Canada. Based on a relationship established between field-sampled soil moisture and remote-sensed SAR backscatter coefficient, we generated landscape-scale maps of surface hydrological condition and related vascular-plant species richness surrounding the protected area. After processing, SAR data were classified into three hydrological classes: unsaturated, saturated and inundated. By assembling a multi-year series of SAR images acquired across the natural range of hydrological conditions, the probability of surface saturation and inundation was developed. Using the resulting probability map to select sites for biodiversity assessment, we found relatively strong relationships between total vascular plants (species richness, especially ferns and herbs), and the probability of wet area (both saturated and inundated areas) occurrence. Using this relationship, we mapped vascular-plant species richness across the study region revealing opportunities to mitigate impacts from adjacent developments and to expand the park to increase its ecological value. This study presents an important approach for assessing biodiversity of existing parks and generating valuable input layers that help to define ecologically relevant protected-area boundaries.     

Experimental West Nile virus infection in Eastern Screech Owls (Megascops asio)

Eastern Screech Owls (EASOs) were experimentally infected with the pathogenic New York 1999 strain of West Nile virus (WNV) by subcutaneous injection or per os. Two of nine subcutaneously inoculated birds died or were euthanatized on 8 or 9 days postinfection (DPI) after <24 hr of lethargy and recumbency. All subcutaneously inoculated birds developed levels of viremia that are likely infectious to mosquitoes, with peak viremia levels ranging from 10(5.0) to 10(9.6) plaque-forming units/ml. Despite the viremia, the remaining seven birds did not display signs of illness. All birds alive beyond 5 DPI seroconverted, although the morbid birds demonstrated significantly lower antibody titers than the clinically normal birds. Cagemates of infected birds did not become infected. One of five orally exposed EASOs became viremic and seroconverted, whereas WNV infection in the remaining four birds was not evident. All infected birds shed virus via the oral and cloacal route. Early during infection, WNV targeted skin, spleen, esophagus, and skeletal muscle. The two morbid owls had myocardial and skeletal muscle necrosis and mild encephalitis and nephritis, whereas some of the clinically healthy birds that were sacrificed on 14 DPI had myocardial arteritis and renal phlebitis. WNV is a significant pathogen of EASOs, causing pathologic lesions with varying clinical outcomes.     

Interactions between TGFβ1 and cyclic strain in modulation of myofibroblastic differentiation of canine mitral valve interstitial cells in 3D culture

ObjectivesThe mechanisms of myxomatous valve degeneration (MVD) are poorly understood. Transforming growth factor-beta1 (TGFβ1) induces myofibroblastic activation in mitral valve interstitial cells (MVIC) in static 2D culture, but the roles of more physiological 3D matrix and cyclic mechanical strain are unclear. In this paper, we test the hypothesis that cyclic strain and TGFβ1 interact to modify MVIC phenotype in 3D culture.Animals, materials and methodsMVIC were isolated from dogs with and without MVD and cultured for 7 days in type 1 collagen hydrogels with and without 5 ng/ml TGFβ1. MVIC with MVD were subjected to 15% cyclic equibiaxial strain with static cultures serving as controls. Myofibroblastic phenotype was assessed via 3D matrix compaction, cell morphology, and expression of myofibroblastic (TGFβ3, alpha-smooth muscle actin – αSMA) and fibroblastic (vimentin) markers.ResultsExogenous TGFβ1 increased matrix compaction by canine MVIC with and without MVD, which correlated with increased cell spreading and elongation. TGFβ1 increased αSMA and TGFβ3 gene expression, but not vimentin expression, in 15% cyclically stretched MVIC. Conversely, 15% cyclic strain significantly increased vimentin protein and gene expression, but not αSMA or TGFβ3. 15% cyclic strain however was unable to counteract the effects of TGFβ1 stimulation on MVIC.ConclusionsThese results suggest that TGFβ1 induces myofibroblastic differentiation (MVD phenotype) of canine MVIC in 3D culture, while 15% cyclic strain promotes a more fibroblastic phenotype. Mechanical and biochemical interactions likely regulate MVIC phenotype with dose dependence. 3D culture systems can systematically investigate these phenomena and identify their underlying molecular mechanisms.