不同刈割强度下羊草转录组研究

刈割是一种重要的草地管理措施,刈割留茬高度直接影响草地生产力及群落结构,在牧草生产中具有重要意义。为研究羊草在不同刈割强度下的转录响应,利用Illumina HiSeq-PE150高通量测序技术,对不同刈割留茬高度(0,2,4,8,12 cm)处理下羊草再生叶片进行了转录组测序。共得到139767803条读长(reads),41.94 Gb原始数据。经过过滤、质控与从头组装后,总共得到转录本270207条,总长度为191.6 Mb。通过与多种数据库比对得到48097条单基因簇(Unigene)注释结果。筛选出了所有刈割强度处理与不刈割对照组显著差异基因共2579条,经过生物信息分析,将其定位到碳水化合物代谢、损伤应答、过氧化氢分解、植物激素信号转导等功能与代谢通路。利用聚类方法得到了随着刈割强度增强,表达量规律变化的基因,分别富集到了过氧化物酶体、光合作用等代谢途径。对羊草在不同刈割高度下的转录组进行了研究,为草本植物分子生物学研究提供了宝贵的数据资源,对于解析羊草响应刈割的分子调控机制及相关基因挖掘具有重要指导意义。     

开食料中不同NDF水平对犊牛生长性能、瘤胃内环境及血清生化指标的影响

为探索开食料中不同NDF水平对犊牛生长、瘤胃发酵参数以及血清生化指标的影响,选用初生重相近(42±2.5) kg、饲喂足量初乳的中国荷斯坦犊牛60头,其中公犊牛36头,母犊牛24头。随机分为A、B、C和D 4个处理组,每个处理15头,其中9头公犊牛+6头母犊牛,试验犊牛于犊牛岛(1.5 m×3.4 m)单独饲养。15日龄开始分别饲喂NDF水平不同的4种开食料,分别为:A处理10%,B处理15%,C处理20%和D处理25%,70日龄断奶,试验期112 d。结果表明:1)0~42日龄和70~112日龄,B组日增重均高于A、C和D组(P<0.05),分别高出45.69、39.79、117.13 g·d^-1和35.33、153.29、 145.93 g·d^-1。70~112日龄,B、C和D组开食料采食量显著高于A组(P<0.05),分别高出255.20、252.48和392.27 g·d^-1。A(0.61)和B(0.60)组犊牛的饲料转化率显著高于C(0.55)和D(0.54)组(P<0.05);2)犊牛瘤胃pH在35和70日龄时,C组显著高于其他3组(P<0.05),112日龄时,A和B组显著高于C和D组(P<0.05);3)瘤胃NH₃-N含量在90日龄前差异不显著(P>0.05),但在112日龄时, B、C和D组较A组显著降低16.72%、44.19%和52.10%(P<0.05);4)C和D组乙酸比例显著高于A和B组(P<0.05);B组丙酸比例较A、C和D组高出4.24%、3.18%和6.43% (P<0.05),乙酸/丙酸显著低于A、C和D组(P<0.05);5)各处理组间血清总蛋白、葡萄糖和尿素氮含量无显著差异(P>0.05)。1~3月龄犊牛开食料中NDF适宜水平为15%有利于提高断奶后日增重,促进饲料利用效率,改善瘤胃内环境,且对犊牛血清生化指标无不利影响。     

冷季放牧补饲对甘肃高山细毛后备母羊瘤胃代谢参数及瘤胃微生物数量的影响

旨在筛选出甘肃高山细毛羊后备母羊科学合理的补饲料,改变牧区由于营养供给不足导致甘肃高山细毛羊2.5岁才能配种的饲养方式。试验选择甘肃高山细毛羊(12月龄)48只,随机分为试验a(1号料)、b(2号料)、c(3号料)组和对照组(不补饲),进行90 d放牧补饲试验。结果表明,1)瘤胃pH试验a组和b组差异极显著(P<0.01)、c组显著(P<0.05)低于对照组,瘤胃氨态氮、蛋白氮、总氮浓度试验组均极显著高于对照组(P<0.01),总挥发性脂肪酸(VFA)试验a组和b组均极显著高于对照组(P<0.01),b组显著高于c组(P<0.05);乙酸和丙酸摩尔比a组极显著高于对照组(P<0.01),b和c组显著高于对照组(P<0.05);丁酸摩尔比a组极显著高于c组(P<0.01);乙/丙b组显著低于对照组(P<0.05)。2)瘤胃纤维降解菌和原虫数目试验组均极显著(P<0.01)或显著(P<0.05)高于对照组。综上所述,补饲均能正向影响甘肃高山细毛羊后备母羊瘤胃代谢参数及瘤胃微生物数量,以1号料补饲效果最优,2号料也能起到理想效果。     

高寒区轮作模式对当归田土壤特性及药材产量的影响

连作重茬造成当归产量逐年下降。采用药用植物秦艽(QJ)、羌活(QH)轮作当归(DG),以当归连作为对照,通过测定土壤和药材产量指标,利用主成分分析确定各指标权重,并结合隶属综合因子分析和聚类分析,旨在揭示不同药用作物轮作当归对土壤环境与药材产量的影响,为筛选适宜当归栽培的轮作模式提供科学依据。结果表明,不同作物轮作对当归田土壤特性和药材产量均具有显著影响,秦艽轮作当归可有效改善土壤特性,使当归成药期土壤磷和钾含量处于较低水平,而有机质维持在较高水平,对土壤水分的季节调控作用更为显著,与当归连作相比较,当归成药率提高94.10%,药材单根鲜重和药材鲜产量分别提高53.46%和125.56%,而羌活轮作当归土壤pH最高,有机质含量最低,当归连作土壤有机质含量虽高,但土壤富集磷和钾,对土壤水分季节性调控作用最小,当归成药率和药材产量均低。不同轮作模式当归成药率和药材产量依次为秦艽-当归>当归-当归>羌活-当归,综合指数大小依次为秦艽-当归(0.8132)>羌活-当归(0.3315)>当归连作(0.2051)。聚类分析将3种轮作模式分为三大类,重复小区亚类间距离均小,说明不同作物轮作对土壤的调控作用不同,高寒产区秦艽轮作当归是优化调控土壤环境,提高当归产出性能的有效轮作模式。     

The IMPDH inhibitors,ribavirin and mycophenolic acid,inhibit peste des petits ruminants virus infection

Peste des petits ruminants virus (PPRV) causes highly contagious diseases in domestic and particular wild small ruminants, leading to substantial economic loss. The development of effective and cheap antiviral medications shall help to circumvent this emerging burden. In this study, we found that ribavirin, a competitive inosine-5’-monophosphate dehydrogenase (IMPDH) inhibitor, significantly inhibits the replication of PPRV. As IMPDH is a key enzyme in purine nucleotide synthesis, supplementation of exogenous guanosine attenuate the anti-PPRV effect of ribavirin. Interestingly, an uncompetitive IMPDH inhibitor, mycophenolic acid (MPA), exerted more potent antiviral effect again PPRV. Similarly, this effect was largely restored upon supplementation of guanosine. Thus, we have demonstrated that the IMPDH inhibitors ribavirin and MPA combat PPRV infection through purine nucleotide depletion. Because both regimens have been widely used in the clinic for treating viral infection or organ rejection in transplantation patients for decades, respectively, repurposing these existing safe and cheap medications may provide a new avenue for combating PPRV infection.     

Effect of gut stress induced by oxidized wheat gluten on the growth performance,gut morphology and oxidative states of broilers

This study was to investigate the effect of oxidized wheat gluten (OG) on growth performance, gut morphology and its oxidative states of broilers. One hundred and eighty‐day‐old male broilers (10 chicks/pen) were randomly allocated into three dietary treatments: control diet (CON), diet with 8% wheat gluten (WG) and diet with 8% OG with six pens/treatment. Body weight (BW) (21 and 35 days) and average daily gain (ADG) (1–21 days and 22–35 days) decreased (p < .05) and feed conversion ratio (FCR) (1–21 days and 22–35 days) increased (p < .05) in OG treatment. Feed intake (FI) decreased (p < .05) in WG and OG treatments during 22–35 days. However, FI was not influenced by dietary treatments during 1–21 days (p > .05). The OG‐fed broilers had a lower faecal pH value (p < .05) and higher faecal moisture content (p < 05) at 14, 21, 28 and 35 days. Villus height, crypt depth and V/C value were not different (p > .05) among treatments at 21 and 35 days. Lipid peroxidation (LPO) (21 and 35 days) and malondialdehyde (MDA) (35 days) content in crop of OG treatment increased (p < .05). Oxidized glutathione (GSSG) (21 days), LPO (21 and 35 days) and MDA (21 and 35 days) content in ileum of OG treatment increased (p < .05). The reduced glutathione/oxidized glutathione (GSH/GSSG) (21 days) and (GSH) (35 days) in ileum of OG treatment decreased (p < .05). The present findings indicate that OG might be a stressor for broiler gut, which could induce oxidative stress both in crop and in ileum, and the diarrhoea as well. The growth performance of broiler was consequently depressed.     

Multimarker and rare variants genomewide association studies for bone weight in Simmental cattle

Bone weight, defined as the total weight of the bones in all the forequarter and hindquarter joints, can reflect somebody conformation traits and skeletal diseases. To gain a better understanding of the genetic determinants of bone weight, we used a composite strategy including multimarker and rare‐marker association to perform genomewide association studies (GWAS) for that character in Simmental cattle. Our strategy consisted of three models: (i) A traditional linear mixed model (LMM) was applied (Q+K‐LMM); (ii) single nucleotide polymorphisms (SNPs) with p‐values less than .05 from the LMM were selected to undergo the least absolute shrinkage and selector operator (Lasso) in the second stage (LMM‐Lasso); (iii) genes containing two or more rare SNPs were examined by performing the sequence kernel association test (gene‐based SKAT). A total of 1,225 cattle were genotyped with an Illumina BovineHD BeadChip containing 770,000 SNPs. After the quality‐control procedures, 1,217 individuals with 608,696 common SNPs and 105,787 rare SNPs (with 0.001 < minor allele frequency [MAF] <0.05) remained in the sample for analysis. A traditional LMM successfully mapped three genes associated with bone weight, while LMM‐Lasso identified nine genes, which included all genes found by traditional LMM. Only a single gene, EPHB3, surpassed the significance threshold after Bonferroni correction in gene‐based SKAT. In conclusion, based on functional annotation and results from previous endeavours, we believe that LCORL, RIMS2, LAP3, PRKAR2B, CHSY1, MAP2K6 and EPHB3 are candidate genes for bone weight. In general, such a comprehensive strategy for GWAS may be useful for researchers seeking to probe the full genetic architecture underlying economic traits in livestock.     

放牧对草地生态系统温室气体的影响

放牧主要通过影响草地生态系统中土壤的理化性质(土壤含水率、孔隙度、微生物和有机物含量的构成)来影响整个生态系统温室气体的排放。草地生态系统土壤中,植物根系的呼吸作用、土壤微生物的活动以及各种物理、化学和生物作用为温室气体的主要来源。本文在阐述草地生态系统温室气体排放机制和作用的基础上,主要从放牧管理模式、放牧强度、放牧动物等放牧作用对草地生态系统温室气体的排放情况进行了综述,就今后放牧对草地生态温室气体的研究重点和方向进行了展望,总结了适合不同放牧条件下整个生态系统温室气体的减排措施。     

玛曲高寒草甸放牧强度的遥感监测

为给玛曲县高寒草甸草-畜平衡和草地资源的可持续利用提供科学依据,本研究利用遥感技术,结合2016年地面实测数据和同时期的MODIS影像资料,分别建立了研究区草地地上生物量和植被指数(NDVI)、相对放牧强度间的回归模型以及不同相对放牧强度和NDVI值之间的幂回归模型。结果表明,6-9月调查点NDVI和地上生物量间存在较好的相关性,即随着NDVI值的增加生物量呈上升趋势,且9月份的拟合(R2=0.510 2)达到了极显著水平;实测地上生物量和相对放牧强度之间有很好的拟合关系(R2=0.965 1),随着放牧强度的增加地上生物量呈下降趋势;相对放牧强度和植被指数间相关性较好(R2=0.631),即随着NDVI值的变小,相对放牧强度逐渐增强,当相对放牧强度增强到一定程度时,NDVI对其响应不灵敏。