Application of biotechnology in breeding lentil for resistance to biotic and abiotic stress

Summary Lentil is a self-pollinating diploid (2n = 14 chromosomes) annual cool season legume crop that is produced throughout the world and is highly valued as a high protein food. Several abiotic stresses are important to lentil yields world wide and include drought, heat, salt susceptibility and iron deficiency. The biotic stresses are numerous and include: susceptibility to Ascochyta blight, caused by Ascochyta lentis; Anthracnose, caused by Colletotrichum truncatum; Fusarium wilt, caused by Fusarium oxysporum; Sclerotinia white mold, caused by Sclerotinia sclerotiorum; rust, caused by Uromyces fabae; and numerous aphid transmitted viruses. Lentil is also highly susceptible to several species of Orabanche prevalent in the Mediterranean region, for which there does not appear to be much resistance in the germplasm. Plant breeders and geneticists have addressed these stresses by identifying resistant/tolerant germplasm, determining the genetics involved and the genetic map positions of the resistant genes. To this end progress has been made in mapping the lentil genome and several genetic maps are available that eventually will lead to the development of a consensus map for lentil. Marker density has been limited in the published genetic maps and there is a distinct lack of co-dominant markers that would facilitate comparisons of the available genetic maps and efficient identification of markers closely linked to genes of interest. Molecular breeding of lentil for disease resistance genes using marker assisted selection, particularly for resistance to Ascochyta blight and Anthracnose, is underway in Australia and Canada and promising results have been obtained. Comparative genomics and synteny analyses with closely related legumes promises to further advance the knowledge of the lentil genome and provide lentil breeders with additional genes and selectable markers for use in marker assisted selection. Genomic tools such as macro and micro arrays, reverse genetics and genetic transformation are emerging technologies that may eventually be available for use in lentil crop improvement.     

Projecting global and regional outlooks for planted forests under the shared socio-economic pathways

New Forests - There is rising global interest in growing more trees in order to meet growing population, climate change, and wood energy needs. Using recently published data on planted forests by...     

Implications of growth uncertainties associated with climate change for stand management

Climate change is expected to have substantial effects on many aspects of forest ecosystems, including timber production. Temperatures in northern Europe are expected to increase considerably, although there is substantial uncertainty about both the seasonal and average changes that will occur. In Scandinavia, production is predicted to increase across most of the area covered by boreal forest, since the growth of trees in the region is currently limited by temperature. Therefore, we have analyzed the importance of adapting management practices to future climate changes and considered possible ways to address associated stand management problems. For this purpose, we simulated climate scenarios with temperature increases ranging from 2.5 to 6.0°C over a 100-year period, and effects on typical Swedish stands with several species, then optimized their management with simulated annealing. The results indicate that the maximum considered temperature trend would raise the economic value of the stands by almost 5% more than the minimum trend. However, the importance of optimizing management plans in accordance with the correct temperature scenario appears to be limited. The plan optimized for the minimum temperature trend was only marginally inferior to the plan optimized for the maximum temperature trend in the maximum trend scenario, and vice versa. It also seemed adequate to use a deterministic formulation of the problem, and in cases where a stochastic climate change model generated more robust plans, the advantage could be attributed to model artifacts rather than climate change per se.     

Removal of nutrient limitations by long-term fertilization decreases nocturnal water loss in savanna trees

Under certain environmental conditions, nocturnal transpiration can be relatively high in temperate and tropical woody species. We have previously shown that nocturnal sap flow accounts for up to 28% of total daily transpiration in woody species growing in a nutrient-poor Brazilian Cerrado ecosystem. In the present study, we assessed the effect of increased nutrient supply on nocturnal transpiration in three dominant Cerrado tree species to explore the hypothesis that, in nutrient-poor systems, continued transpiration at night may enhance delivery of nutrients to root-absorbing surfaces. We compared nocturnal transpiration of trees growing in unfertilized plots and plots to which nitrogen (N) and phosphorus (P) had been added twice yearly from 1998 to 2005. Three independent indicators of nocturnal transpiration were evaluated: sap flow in terminal branches, stomatal conductance (g(s)), and disequilibrium in water potential between covered and exposed leaves (DeltaPsi(L)). In the unfertilized trees, about 25% of the total daily sap flow occurred at night. Nocturnal sap flow was consistently lower in the N- and P-fertilized trees, significantly so in trees in the N treatment. Similarly, nocturnal g(s) was consistently lower in fertilized trees than in unfertilized trees where it sometimes reached values of 150 mmol m(-2) s(-1) by the end of the dark period. Predawn gs and the percentage of nocturnal sap flow were linearly related. Nocturnal DeltaPsi(L) was significantly greater in the unfertilized trees than in N- and P-fertilized trees. The absolute magnitude of DeltaPsi(L) increased linearly with the percentage of nocturnal sap flow. These results are consistent with the idea that enhancing nutrient uptake by allowing additional transpiration to occur at night when evaporative demand is lower may avoid excessive dehydration associated with increased stomatal opening during the day when evaporative demand is high.     

Transpiration and forest structure in relation to soil waterlogging in a Hawaiian montane cloud forest

Transpiration, leaf characteristics and forest structure in Metrosideros polymorpha Gaud. stands growing in East Maui, Hawaii were investigated to assess physiological limitations associated with flooding as a mechanism of reduced canopy leaf area in waterlogged sites. Whole-tree sap flow, stomatal conductance, microclimate, soil oxidation-reduction potential, stand basal area and leaf area index (LAI) were measured on moderately sloped, drained sites with closed canopies (90%) and on level, waterlogged sites with open canopies (50-60%). The LAI was measured with a new technique based on enlarged photographs of individual tree crowns and allometric relationships. Sap flow was scaled to the stand level by multiplying basal area-normalized sap flow by stand basal area. Level sites had lower soil redox potentials, lower mean stand basal area, lower LAI, and a higher degree of soil avoidance by roots than sloped sites. Foliar nutrients and leaf mass per area (LMA) in M. polymorpha were similar between level and sloped sites. Stomatal conductance was similar for M. polymorpha saplings on both sites, but decreased with increasing tree height (r(2) = 0.72; P < 0.001). Stand transpiration estimates ranged from 79 to 89% of potential evapotranspiration (PET) for sloped sites and from 28 to 51% of PET for level sites. Stand transpiration estimates were strongly correlated with LAI (r(2) = 0.96; P < 0.001). Whole-tree transpiration was lower at level sites with waterlogged soils, but was similar or higher for trees on level sites when normalized by leaf area. Trees on level sites had a smaller leaf area per stem diameter than trees on sloped sites, suggesting that soil oxygen deficiency may reduce leaf area. However, transpiration per unit leaf area did not vary substantially, so leaf-level physiological behavior was conserved, regardless of differences in tree leaf area.     

Temporal dynamics of stem expansion and contraction in savanna trees: withdrawal and recharge of stored water

Relationships between diel changes in stem expansion and contraction and discharge and refilling of stem water storage tissues were studied in six dominant Neotropical savanna (cerrado) tree species from central Brazil. Two stem tissues were studied, the active xylem or sapwood and the living tissues located between the cambium and the cork, made up predominantly of parenchyma cells (outer parenchyma). Outer parenchyma and sapwood density ranged from 320 to 410 kg m(-3) and from 420 to 620 kg m(-3), respectively, depending on the species. The denser sapwood tissues exhibited smaller relative changes in cross-sectional area per unit change in water potential compared with the outer parenchyma. Despite undergoing smaller relative changes in cross-sectional area, the sapwood released about 3.5 times as much stored water for a given change in area as the outer parenchyma. Cross-sectional area decreased earlier in the morning in the outer parenchyma than in the sapwood with lag times up to 30 min for most species. The relatively small lag time between dimensional changes of the two tissues suggested that they were hydraulically well connected. The initial morning increase in basal sap flow lagged about 10 to 130 min behind that of branch sap flow. Species-specific lag times between morning declines in branch and main stem cross-sectional area were a function of relative stem water storage capacity, which ranged from 16 to 31% of total diurnal water loss. Reliance on stored water to temporarily replace transpirational losses is one of the homeostatic mechanisms that constrain the magnitude of leaf water deficits in cerrado trees.     

In vitro anti-uveal melanoma activity of phenolic compounds from the Egyptian medicinal plant Acacia nilotica

Anti-uveal melanoma activity-guided fractionation of the MeOH extract of Acacia nilotica pods resulted in the isolation of the new compound gallocatechin 5-O-gallate (5) in addition to methyl gallate (1), gallic acid (2), catechin (3), catechin 5-O-gallate (4), 1-O-galloyl-β-D-glucose (6), 1,6-di-O-galloyl-β-D-glucose (7) and digallic acid (8). The structures of the isolated compounds were elucidated on the basis of HRESIMS, NMR spectroscopy and CD data. In addition to uveal melanoma, the antiproliferative activities of the isolated compounds and the related compound epigallocatechin 3-O-gallate (EGCG) were evaluated against cutaneous melanoma, ovarian cancer, glioblastoma and normal retinal pigmented cells.     

Estimating Exposure to Methylmercury: Effects of Uncertainties

Uncertainties in exposures can lead to biased estimates of slopes and thresholds in the exposure-response relationships that are developed from regression analysis. This paper reviews published exposure and epidemiological studies of methylmercury (MeHg) from the perspective of the accuracy and precision of the estimates used to represent the actual doses received. Sources of such uncertainties, collectively referred to as “exposure errors”, include instrumental and analytical errors, sampling and survey uncertainties, and individual variability in the relationships between the exposure metrics and the actual doses to target organs. Because the relationship between maternal intake and the consequent dose to the fetal brain varies among individuals, epidemiological studies of the effects of prenatal exposure must necessarily be accompanied by larger exposure uncertainties than comparable studies of effects on the mothers. The increased exposure errors typically result in attenuated slopes of the dose-response functions and under-estimates of thresholds, so that part of the apparent increased sensitivity of the fetus that has been developed from epidemiological studies may in fact be due to their inherently less certain exposures. Sources and magnitudes of exposure error found in the literature are discussed and their statistical ramifications are explored with Monte Carlo simulations. The paper also finds that, after adjusting for exposure error, the relationship between dietary intake and blood concentration is consistent with an average half-life shorter than has typically been used and that using population averages yields a consistent but sub-linear relationship between dietary intake of Hg and hair concentration. Investigators are urged to obtain (and present) data on more than one exposure metric, so that their relative uncertainties may be assessed independently.     

The nutritional status of asymptomatic HIV-infected Africans: directions for dietary intervention?

OBJECTIVE: To compare the relationships between food (nutrient) intakes and biochemical markers of nutritional status of asymptomatic HIV-infected with HIV-uninfected subjects, to gain more information on the appropriate diet for HIV-infected persons at an early stage of infection. DESIGN: Cross-sectional population-based survey. SETTING: North West Province, South Africa. SUBJECTS: Two hundred and sixteen asymptomatic HIV-infected and 1550 HIV-uninfected men and women volunteers aged 15 years and older, recruited as 'apparently healthy' subjects from 37 randomly selected sites. OUTCOME MEASURES: Food and nutrient intakes, measured with a validated food-frequency questionnaire, and nutritional status indicated by anthropometric and biochemical variables, measured by a standardised methodology. RESULTS: The prevalence of HIV infection in the study population was 11.9%. The anthropometric indices and nutrient intakes of HIV-infected and uninfected subjects did not differ significantly, indicating that these 216 HIV-infected subjects were at an early stage of infection. Of the biochemical nutritional status variables, high-density lipoprotein cholesterol and total cholesterol, haemoglobin, albumin and triglycerides were significantly lower in infected subjects. They also had higher globulin and liver enzyme levels than uninfected subjects. In infected subjects, serum albumin correlated significantly with serum lipids, serum vitamin A, serum vitamin E, serum iron, total iron-binding capacity and haemoglobin. The significant positive correlations of the liver enzymes with serum lipids, albumin, vitamin A and iron, observed in HIV-uninfected subjects, disappeared in the infected subjects. Polyunsaturated fat intake showed significant positive correlations with the increased liver enzymes in infected subjects. A principal components analysis indicated that, in infected subjects, increased liver enzymes correlated with higher consumption of maize meal and lower consumption of meat and vegetables. CONCLUSIONS AND RECOMMENDATIONS: This survey indicated that asymptomatic HIV-infected subjects who followed a diet rich in animal foods had smaller decreases in serum albumin, haemoglobin and lipid variables, and smaller increases in liver enzymes, than those who consumed a diet based on staple foods. This suggests that animal foods are associated with improved nutritional status in HIV-infected persons. These results should be confirmed with intervention studies before dietary recommendations for asymptomatic HIV-infected individuals can be made.