Identification and Characterisation of Bacteria Causing Soft-rot in Agave tequilana

Agave tequilana is the raw material for the production of the alcoholic beverage tequila. A bacterial disease has affected the A. tequilana crop in recent years. Previous reports based on colony and cell morphology, Gram stain and potato rot indicated that Erwinia sp. is the main pathogen. We isolated a several bacterial isolates capable of producing soft-rot symptoms in greenhouse pathogenicity assays. An extensive characterisation involving pathogenicity tests, fatty acid profile, metabolic and physiological properties, ribosomal DNA sequence and intergenic transcribed spacer amplification (ITS-PCR) and restriction banding pattern (ITS-RFLP) was made of each isolate. Three different species: Erwinia cacticida, Pantoea agglomerans and Pseudomonas sp. were identified. Fatty acid and metabolic profiles gave low similarity values of identification but 16S rDNA sequence, ITS-PCR and ITS-RFLP confirmed the identification of E. cacticida. In the phylogenetic tree, E. cacticida from blue agave was grouped neither with E. cacticida type strains nor with Erwinia carotovora. This is the first report that associates E. cacticida with A. tequilana soft-rot symptoms.     

Characterization and PCR-based Typing of Xanthomonas campestris pv. vesicatoria from Peppers and Tomatoes in Serbia

During the last two decades bacterial strains associated with necrotic leaf spots of pepper and tomato fruit spots were collected in Serbia. Twenty-eight strains isolated from pepper and six from tomato were characterized. A study of their physiological and pathological characteristics, and fatty acid composition analysis revealed that all of the strains belong to Xanthomonas campestris pv. vesicatoria. Being non-amylolytic and non-pectolytic, pathogenic on pepper but not on tomato, containing lower amounts of fatty acid 15 : 0 ante–iso, the pepper strains were designated as members of the A group of X. campestris pv. vesicatoria. However, the tomato strains hydrolyzed starch and pectate, caused compatible reactions on tomato but not on pepper, had higher percent of 15 : 0 ante–iso fatty acid, and were classified into B phenotypic group and identified as X. vesicatoria. PCR primers were developed which amplified conserved DNA regions related to the hrp genes of different strains of X. campestris pv. vesicatoria associated with pepper and tomato. Restriction analysis of the PCR product resulted in different patterns and enabled grouping of the strains into four groups. When xanthomonads isolated from pepper and tomato in Serbia were analyzed, they clustered into two groups corresponding to the grouping based on their physiological and pathological characteristics. According to the reaction of pepper and tomato differential varieties, the strains from pepper belong to races P7 and P8 and tomato strains belong to the race T2. All strains were sensitive to copper and streptomycin. Advantages and disadvantages of various bacterial spot management practices are discussed.     

Influence of Soil Temperature and Matric Potential on Sugar Beet Seedling Colonization and Suppression of Pythium Damping-Off by the Antagonistic Bacteria Pseudomonas fluorescens and Bacillus subtilis

ABSTRACT Pseudomonas fluorescens B5 and Bacillus subtilis MBI 600 colonized sugar beet seedlings at matric potentials of -7 x 10(3), -140 x 10(3), and -330 x 10(3) Pa and under five temperature regimes ranging from 7 to 35 degrees C, with diurnal fluctuations of 5 to 22 degrees C. No interaction between matric potential and temperature was observed. In situ bioluminescence indicated physiological activity of Pseudomonas fluorescens B5. Colonization of the root at >/=4 cm below the seed decreased at very low matric potential (-330 x 10(3) Pa). Total population size of Pseudomonas fluorescens B5 per seedling was significantly increased at -140 x 10(3) Pa. However, matric potential had no significant effect on the population density of Pseudomonas fluorescens per gram of root fresh weight and did not affect the distribution of the population down the root. Total population size per seedling and downward colonization by Pseudomonas fluorescens B5 were significantly reduced at high temperatures (25 to 35 degrees C). Maximum colonization down the root occurred at intermediate temperature (15 degrees C) at both matric potentials (-7 x 10(3) and -140 x 10(3) Pa). Addition of B. subtilis MBI 600 to the seed had no effect on rhizosphere populations of Pseudomonas fluorescens B5. Populations of B. subtilis MBI 600, which consisted largely of spores, were slightly reduced at lower matric potentials and were not affected by temperature. Survival and dry weight of plants in soils infested with Pythium spp. decreased with increasing soil temperature and matric potential, indicating an increase in disease pressure. However, there was no significant interaction between the two factors. At -330 x 10(3) Pa, soil dryness but not Pythium infection was the limiting factor for plant emergence. At temperatures of 7 to 25 degrees C and matric potentials of -7 x 10(3) to 120 x 10(3) Pa, treatment with Pseudomonas fluorescens B5 increased plant survival and dry weight. At 7 degrees C and -120 x 10(3) Pa, there was almost complete emergence of seeds treated with Pseudomonas fluorescens B5. Antagonistic activity of Pseudomonas fluorescens B5 decreased with increasing soil temperature and decreasing matric potential. At 25 to 35 degrees C and -7 x 10(3) Pa, no effect was observed. In regimes with different day and night temperatures, the maximum (day) temperature was decisive for disease development and antagonistic activity. B. subtilis MBI 600 displayed no significant antagonistic effect against Pythium ultimum and did not influence the performance of Pseudomonas fluorescens B5 in combined inocula.     

Botrytis cinerea Infection of Grape Flowers: Light and Electron Microscopical Studies of Infection Sites

ABSTRACT Specific floral organs including the calyptra, stigma, and receptacle area of glasshouse-grown grapevines (Vitis vinifera cv. Cabernet Sauvignon) were inoculated with aqueous suspensions of Botrytis cinerea conidia, and the initial steps involved in colonization and infection of the host tissues were studied for several days postinoculation using light microscopy as well as scanning and transmission electron microscopy. Conidia germinated on all floral organs examined and became attached to the host surface within 48 h after inoculation. However, in all cases the vast majority of conidia accumulated in a channel-like gap between the ovary and the calyx that extended in a narrowing fashion into the flower interior where the ovary joined the receptacle. Very few conidial germ tubes were detected in the style following inoculation of the stigma, and no evidence for their growth toward the ovaries could be found. In contrast, hyphae were more abundant in the receptacle area, regardless of the site of inoculation. Tips of the calyx became necrotic and mycelium formed in the gap between ovary and calyx within 72 h following inoculation, providing a major point of colonization and infection. B. cinerea colonized dehiscent calyptras within 72 h of inoculation, providing a potential source of inoculum from calyptras that remained stuck in the cluster. The results suggest that the grape flower's receptacle area is the predominant site of infection for B. cinerea, although a minor portion of infections may also occur through the stigma and style.     

Interfertility of Two Mating Populations in the Gibberella Fujikuroi Species Complex

Gibberella fujikuroi and Gibberella intermedia(mating populations ‘C’ and ‘D’ of the G. fujikuroi species complex) can be distinguished by differences in the spectrum of mycotoxins produced, the lack of sexual cross-fertility and diagnostic differences in their DNA sequences. Some isolates from these two biological species, however, can interbreed and complete meiosis to produce viable progeny. Analysis of marker segregation amongst such hybrid progeny can be used to estimate the degree of genomic rearrangement and genetic incompatibility that has accumulated since these sibling species diverged. Recombinant progeny were isolated from crosses of the standard tester strains for these two species and from crosses between these standard testers and a field isolate (KSU X-10626) that was cross-fertile with tester strains of both species. Progeny in all of the crosses segregated for amplified fragment length polymorphisms (AFLPs). Segregation of AFLP loci deviated from 1:1 for two thirds of the loci amongst the progeny of the cross between the ‘C’ and ‘D’ mating population tester strains, but <20% of the polymorphic loci in the cross of either tester with KSU X-10626 showed such distortion. It was concluded that G. intermedia and G. fujikuroi are sufficiently interfertile to belong to the same biological species, but that changing the nomenclature to reflect this interfertility requires more evidence for the natural occurrence of a continuum in fertility than is presently available.     

Effects of foliar- and root-applied silicon on the enhancement of induced resistance to powdery mildew in Cucumis sativus

Two cucumber ( Cucumis sativus ) cultivars differing in their resistance to powdery mildew, Ningfeng No. 3 (susceptible) and Jinchun No. 4 (resistant), were used to study the effects of foliar- and root-applied silicon on resistance to infection by Podosphaera xanthii (syn. Sphaerotheca fuliginea ) and the production of pathogenesis-related proteins (PRs). The results indicated that inoculation with P. xanthii significantly suppressed subsequent infection by powdery mildew compared with noninoculation, regardless of Si application. Root-applied Si significantly suppressed powdery mildew, the disease index being lower in Si-supplied than in Si-deprived plants, regardless of inoculation treatment. The resistant cultivar had a more constant lower disease index than the susceptible cultivar, irrespective of inoculation or Si treatment. Moreover, with root-applied Si, activities of PRs (for example peroxidase, polyphenoloxidase and chitinase) were significantly enhanced in inoculated lower leaves or noninoculated upper leaves in inoculated plants of both cultivars. Root-applied Si significantly decreased the activity of phenylalanine ammonia-lyase in inoculated leaves, but increased it in noninoculated upper leaves. However, Si treatment failed to change significantly the activity of PRs in plants without fungal attack. Compared to the control (no Si), foliar-applied Si had no effects either on the suppression of subsequent infection by P. xanthii or on the activity of PRs, irrespective of inoculation. Based on the findings in this study and previous reports, it was concluded that foliar-applied Si can effectively control infections by P. xanthii only via the physical barrier of Si deposited on leaf surfaces, and/or osmotic effect of the silicate applied, but cannot enhance systemic acquired resistance induced by inoculation, while continuously root-applied Si can enhance defence resistance in response to infection by P. xanthii in cucumber.     

Fusarium confers protection against several mycelial pathogens of pepper plants

Inoculation of nonhost pepper ( Capsicum annuum ) plants with the tomato wilt pathogen, Fusarium oxysporum f.sp. lycopersici (FOL), caused no symptoms and the fungus was not recovered from any part of the plant. FOL, however, partially protected pepper plants from subsequent infection with Phytophthora capsici , Verticillium dahliae or Botrytis cinerea by significantly reducing the percentage of diseased plants and the appearance and intensity of symptoms. FOL did not inhibit the mycelial growth of these pathogens in vitro . The protection induced by FOL against Botrytis was inhibited by 1-methylcyclopropene (MCP), an inhibitor of ethylene perception, suggesting the involvement of this hormone in the signalling of FOL-induced resistance. The activities of β-1,3-glucanase and peroxidase 48 h after FOL induction were similar to those in control plants. Chitinase activity, however, was higher in the stems of plants inoculated with FOL. A study of the levels of phenolic compounds revealed that cell-wall-bound phenolics were more abundant in plants treated with FOL, especially in stems, while soluble phenolic contents did not differ.     

The yam nematode (Scutellonema bradys), a potential threat to potato (Solanum tuberosum) production in West Africa

Potato (Solanum tuberosum) production in Africa is rapidly expanding and becoming increasingly important. As its geographical production range broadens, so does its potential to host new pests and diseases. Following the discovery that potato can be affected by Scutellonema bradys, further studies were undertaken to assess its potential pathogenicity on potato under screenhouse and field conditions, and on marketed tubers. Potato plants inoculated with S. bradys produced tubers with substantial cracking and evident tuber rot, compared with tubers from uninoculated plants. Symptoms of nematode infection on tubers included a scaly appearance, surface cracking as well as deeper tissue cracks, distortions, and darkened surface patches. In most cases these patches were related to sub‐surface rot. Nematodes were recovered from the soil, roots and tubers of inoculated plants. Eight weeks after inoculation, the reproduction factor of the nematode was greatest (2·0) at the lowest inoculation rate assessed (1000 nematodes per 2·5‐L pot) and least (0·4) at the highest inoculation rate (5000 nematodes per pot). In the screenhouse, potato tuber weights were low and mostly unaffected by nematode inoculation rate, except at 5000 nematodes per pot. In the field, non‐inoculated plants yielded over nine times more tubers than plants inoculated with 2000 S. bradys. Low densities of S. bradys were also recovered from 10 of 15 (67%) samples collected from market stalls, indicating field infection. This study confirms that potato can host and be damaged by S. bradys, raising its prospect as a likely significant biotic constraint to the crop.     

Studies on the suitability of trap-tubs to control noxious rodents in forests

Various types of trap-tubs were tested both under controlled conditions in standardised trial series and in the field. New trap-tubs were poorly accepted by the animals, whereas weathered tubs were readily accepted within a very short period of time. The trapping mechanisms of tubs used in Lower Saxony and improved tubs in Hesse were both found to be suitable. The trapping method proved to be highly selective since long-tailed mice (Apodemus spp.) can easily escape by jumping onto the edge of the tub. Voles (Microtus agrestis, Clethrionomys glareolus) explored the inside of the tub and worked its exits with decreasing intensity during the time of captivity. They died of hypothermia within a few hours. Elimination of the trapped rodents by their natural enemies was not observed. The trials showed that trap-tubs are suitable for selective reduction of the density of field voles and red-backed voles in forests. The results also contribute to assessing the humaneness of the control method.