Comparison of methods for handling censored records in beef fertility data: simulation study

A simulation study was conducted to compare methods for handling censored records for days to calving in beef cattle data. Days to calving was defined as the time, in days, between when a bull is turned out in the pasture and the subsequent parturition. Simulated data were generated to have data structure and genetic relationships similar to an available field data set. Records were simulated for 33,176 daughters of 4,238 sires. Data were simulated using a mixed linear model that included the fixed effects of contemporary group and sex of calf, linear and quadratic covariates for age at mating, and random effects of animal and residual error. Two methods for handling censored records were evaluated, and two censoring rates of 12 and 20% were applied to assess the influence of higher censoring rates on inferences. Censored records were assigned penalty values on a within-contemporary group basis under the first method (DCPEN). Under the second method (DCSIM), censored records were drawn from their respective predictive distributions. A Bayesian approach via Gibbs sampling was used to estimate variance components and predict breeding values. Posterior means (PM) and standard deviations (SD) of additive genetic variance for DCPEN at 12 and 20% censoring were 23.2 (3.7) and 21.0 (3.6), respectively, whereas the same estimates for DCSIM at 12 and 20% censoring were 23.7(3.3) and 21.9 (3.4), respectively. In all cases, the true value of the genetic variance was within the high posterior density (HPD) interval (95%). The PM (SD) of residual variance for DCPEN at 12 and 20% censoring were 415.7 (4.7) and 440.0 (4.8) respectively, whereas the same estimates for DCSIM at 12 and 20% censoring were 371.0 (4.3) and 365.4 (4.4), respectively. The true value of the residual variance was within the HPD (95%) for DCSIM, but it was outside this interval for DCPEN at both censoring rates, indicating a systematic bias for this parameter. Bayes Factor and Deviance Information Criteria were used for model comparisons, and both criteria indicated the superiority of the DCSIM method. However, little difference was observed between the two methods for correlations between true breeding values and posterior means of animal effects for sires, indicating that no major reranking of sires would be expected. This finding suggests that either censored data handling technique can be successfully used in a genetic evaluation for days to calving.     

沧州市滨海盐碱区耕层土壤盐分特征

为了解沧州市滨海盐碱区耕层土壤的盐渍化特征,采集三个时期沧州不同地区耕层土壤（0~20 cm）样品,结合样品实验分析,探究土壤盐分特征。结果表明：①沧州滨海盐碱区耕层土壤离子类型多样,检测的八大离子中氯离子、钠离子、硫酸根、碳酸根+碳酸氢根离子为主要盐分离子,土壤类型为硫酸盐-氯化物型。②相关分析表明,耕层土样中总含盐量与氯离子和钠离子均存在显著或极显著相关关系,沧州市滨海盐碱地耕层土壤的总含盐量一定程上取决于土壤中氯化钠的含量;氯化钠、氯化镁和氯化钙为氯化物的主要组成部分;主要硫酸盐类为硫酸钠、硫酸镁和硫酸钙。③方差分析表明,三个不同采样时期和不同地区均对沧州市滨海区盐碱地的盐渍化的影响存在显著或极显著差异。④主成分分析表明,钠离子、氯离子、镁离子、钙离子和硫酸根与第1主成分相关性较高;钾离子和碳酸根+碳酸氢根与第2主成分相关性较高;第3主成分主要反映硅酸盐类对土壤离子成分的影响。由于钠离子、氯离子、钙离子和硫酸根在土壤中含量相对较高,是表征沧州滨海盐碱区土壤盐渍化的主要特征因子。     

Circulating Metabolic Hormones During the Peripubertal Period and Their Association with Testicular Development in Bulls

The objective of the present study was to characterize changes in serum metabolic hormones concentrations from 20 weeks before to 20 weeks post-puberty in bulls and to investigate the associations of metabolic hormones concentrations with testicular development. Leptin concentrations increased from 16 weeks before puberty to 8 weeks post-puberty and insulin concentrations increased from puberty to 8 weeks post-puberty. Growth hormone concentrations decreased after 4 weeks post-puberty, whereas IGF-I concentrations increased from 8 weeks before puberty to 8 weeks post-puberty. During this period, testicular growth was accelerated and testosterone secretion increased substantially, without any significant changes in gonadotropin secretion. Monthly circulating concentrations of leptin, IGF-I and insulin accounted for 63% of the variation in scrotal circumference and 59% of the variation in paired testes volume. In conclusion, the secretion of metabolic hormones was not associated with changes in gonadotropins concentrations. Furthermore, the associations of leptin, IGF-I and insulin concentrations with testes size indicated that these hormones might be involved in a gonadotropin-independent mechanism regulating the testicular development in peripubertal bulls.     

Evaluation of the safety of fenbendazole in cats

OBJECTIVE: To evaluate the safety of fenbendazole in domestic cats. ANIMALS: 28 six- to seven-month old domestic short-hair cats. PROCEDURE: Cats were randomly assigned to 1 of 3 treatment groups or a control group (n = 7/group). Cats in the treatment groups were given fenbendazole at a dosage of 50, 150, or 250 mg/kg, PO, every 24 hours for 9 days; control cats were given a placebo. A fecal examination, coagulation tests, serum biochemical analyses, CBC, and urinalyses were performed before and 5, 9, and 21 days after initiation of treatment; cats were closely monitored for adverse reactions. After the last dose of fenbendazole was given, 4 control cats and 4 cats given fenbendazole at the highest dosage were euthanatized, and necropsies were performed. RESULTS: None of the cats developed any adverse reactions. For cats in the control and all treated groups, laboratory test results were within reference limits, and there were no significant differences in results of laboratory tests among groups. No gross or histologic lesions were identified in the control or treated cats that were euthanatized. CONCLUSIONS AND CLINICAL RELEVANCE: Fenbendazole administered to healthy cats at a dosage 5 times the dosage and 3 times the duration approved for use in dogs and wild felids did not cause any acute or subacute adverse reactions or pathologic changes. Results suggest that cats may be safely treated with fenbendazole.     

Rates of molecular evolution are linked to life history in flowering plants

Variable rates of molecular evolution have been documented across the tree of life, but the cause of this observed variation within and among clades remains uncertain. In plants, it has been suggested that life history traits are correlated with the rate of molecular evolution, but previous studies have yielded conflicting results. Exceptionally large phylogenies of five major angiosperm clades demonstrate that rates of molecular evolution are consistently low in trees and shrubs, with relatively long generation times, as compared with related herbaceous plants, which generally have shorter generation times. Herbs show much higher rates of molecular change but also much higher variance in rates. Correlates of life history attributes have long been of interest to biologists, and our results demonstrate how changes in the rate of molecular evolution that are linked to life history traits can affect measurements of the tempo of evolution as well as our ability to identify and conserve biodiversity.     

Determination of sarafloxacin residues in fortified and incurred eggs using on-line microdialysis and HPLC/programmable fluorescence detection

Isolation of sarafloxacin (SAR) from fortified and incurred chicken eggs was done by a combination of liquid-liquid extraction and aqueous on-line microdialysis performed on an automated trace enrichment of dialysates (ASTED) system. The ASTED system coupled a sample cleanup procedure with HPLC and programmable fluorescence detection. Overall recoveries of 87-102% for SAR were obtained from samples fortified over a range of 1-100 ng/g. The relative standard deviation values ranged from 22 to 26% for samples fortified between 1 and 5 ng/g and from 2 to 12% for samples fortified between 10 and 100 ng/g. The limits of detection and quantitation were 0.2 and 1 ng/g, respectively. Eggs containing incurred SAR, which were collected over a 3-day dosing period and for 5 consecutive days thereafter, also were analyzed by using this technique. Because the method is automated, 35 samples can be processed within a 24-h period, which enables large data sets to be acquired over a short time period.