Dangling bond dynamics on the silicon (100)-2x1 surface: dissociation, diffusion, and recombination

The dynamics of dangling bond (DB) diffusion was studied after deuterium desorption from the silicon (100)-2x1 surface. At elevated temperatures, paired DB sites produced after desorption unpaired as deuterium atoms hopped from adjacent dimers. Below 620 kelvin, the unpaired configuration most commonly observed corresponded to two DBs on adjacent silicon dimers. At higher temperatures, unpaired DBs executed one-dimensional walks along the dimer rows, and recombination was observed with the same partner after walks lasting many minutes. The frequency and extent of these excursions increased with temperature. Above 660 kelvin, complete dissociation was observed and was sometimes followed by recombination by means of partner exchange. The implications for low-temperature materials growth are discussed.     

Direct observations of structural phase transitions in planar crystallized ion plasmas

Laser-cooled 9Be+ ions confined in two-dimensionally extended lattice planes were directly observed, and the images were used to characterize the structural phases of the ions. Five different stable crystalline phases were observed, and the energetically favored structure could be sensitively tuned by changing the areal density of the confined ions. The experimental results are in good agreement with theoretical predictions for the planar (infinite in two dimensions) one-component plasma. Qualitatively similar structural phase transitions occur, or are predicted to occur, in other experimentally realizable planar systems.     

Thermodynamics of calcite growth: baseline for understanding biomineral formation

The complexity of biomineralized structures suggests the potential of organic constituents for controlling energetic factors during crystal synthesis. Atomic force microscopy was used to investigate the thermodynamic controls on carbonate growth and to measure the dependence of step speed on step length and the dependence of critical step length on supersaturation in precisely controlled solutions. These data were used to test the classic Gibbs-Thomson relationship and provided the step edge free energies and free energy barriers to one-dimension nucleation for calcite. Addition of aspartic acid, a common component in biomineralizing systems, dramatically affected growth morphology and altered the magnitude of the surface energy.     

Rice with fish culture in the semi-deep waters of the Mekong Delta, Vietnam: a socio-economical survey

The results of a socio-economical survey of farming systems practising rice culture with introduced fish, rice culture with indigenous fish and rice monoculture in the semi-deep waters of the Mekong Delta, Vietnam, are presented. Rice and fish yields, inputs, and cost-benefits were computed to evaluate the agricultural effects of rice with fish culture. Household size, labour availability and educational level were not significantly different among the three farming systems. Rice-fish farming systems differed mainly from rice monoculture by a higher fertilizer/ water requirement and less pesticide use. The total farm cash and net return did not differ among the farming systems. The main beneficial effects of rice-fish culture are thought to be related to environmental sustainability, system biodiversity, farm diversification and household nutrition.     

Agronomic response and water productivity of almond trees under contrasted deficit irrigation regimes

We investigated the long-term effects of different deficit irrigation (DI) options on tree growth, shoot and leaf attributes, yield determinants and water productivity of almond trees (Prunus dulcis, cv. Marta) grown in a semiarid climate in SE Spain. Three partial root-zone drying (PRD) irrigation treatments encompassing a wide range of water restriction (30%, 50% and 70% of full crop requirements, ET_c) and a regulated deficit irrigation treatment (RDI, at 50% ET_c during kernel-filling) were compared over three consecutive growth seasons (2004–2006) to full irrigation (FI). The results showed that all deficit irrigation treatments have a negative impact on trunk growth parameters. The magnitude of the reduction in trunk growth rate was strongly correlated through a linear relationship with the annual volume of water applied (WA) per tree. Similarly, a significant relationship was found between WA and the increase in crown volume. In contrast, leaf-related attributes and some yield-related parameters (e.g., kernel fraction) were not significantly affected by the irrigation treatments. Except in PRD₇₀, individual kernel weight was significantly reduced in the deficit irrigated treatments. Kernel yield, expressed in percent of the maximum yield observed in the FI treatment, showed a linear decrease with decreasing WA and a slope of 0.43, which implies that a 1% decrease in water application would lead to a reduction of 0.43% in yield. Water productivity increased drastically with the reduction of water application, reaching 123% in the case of PRD₃₀. Overall, our results demonstrate the prevalence of direct and strong links between the intensity of the water restriction under PRD – i.e., the total water supply during the growing season – and the main parameters related to tree growth, yield and water productivity. Noteworthy, the treatments that received similar annual water volumes under contrasted deficit irrigation strategies (i.e., PRD₇₀ and RDI) presented a similar tree performance.     

Growth and maturation of three commercially important coral reef species from American Samoa

Fisheries Science - This study presents age-based life history information on three small-bodied species targeted in the American Samoan fishery: Chlorurus japanensis palecheek...     

Unilateral scrotal pyocele in ram caused by Staphylococcus capitis

A massive unilateral scrotal pyocele caused by Staphylococcus capitis in a 6‐year‐old ram is reported. Ultrasound examination of the right hemiscrotum showed an irregular hyperechoic mass in an anechoic fluid. A dense exudate was collected from the scrotum for microbiological analysis. Grossly, there was an extensive greenish purulent exudate and a completely atrophied right testis. Coagulase‐negative S. capitis was isolated in pure culture. To the authors' knowledge, this is the first report of genital infection by S. capitis in rams. This microorganism should be included in the differential diagnosis of ovine genital infections.     

Mechanisms of viral emergence

A number of virologic and environmental factors are involved in the emergence and re-emergence of viral disease. Viruses do not conservatively occupy a single and permanent ecological niche. Rather, due to their intrinsic capacity for genetic change, and to the evolvability of fitness levels, viruses display a potential to parasitize alternative host species. Mutation, recombination and genome segment reassortment, and combination of these molecular events, produce complex and phenotypically diverse populations of viruses, which constitute the raw material on which selection acts. The majority of emerging viral diseases of humans have a zoonotic origin. Sociologic and ecologic factors produce diverse and changing environments in which viral subpopulations have ample opportunities to be selected from intrinsically heterogeneous viral populations, particularly in the case of RNA viruses. In this manner, new human, animal and plant viruses have emerged periodically and, from all evidence, will continue to emerge. This article reviews some of the mechanisms that have been identified in viral emergence, with a focus on the importance of genetic variation of viruses, and on the general concept of biological complexity.     

Plant water relations and edaphoclimatic conditions affecting acorn production in a holm oak (<Emphasis Type="Italic">Quercus ilex</Emphasis> L. ssp. <Emphasis Type="Italic">ballota</Emphasis>) open woodland

Acorn production patterns and the annual evolution of water relations parameters of Quercus ilex ssp. ballota (Desf.) Samp. in a dehesa (an open woodland forest) subject to various soil treatments (ploughing, ploughing + sowing, control) were studied in southwest Spain from June 2006 to December 2008. The effects of soil water holding capacity and effective soil depth on soil and plant water status and acorn production were also investigated. Water parameters showed significant differences between the ploughing treatment and the control, and there were also significant temporal differences. Xylem water potential ranged from −3.4 ± 0.1 to −0.7 ± 0.2 MPa, and cuticular transpiration was 62.4–192.9 mmol H₂O kg⁻¹ s⁻¹. Acorn production did not differ significantly according to soil treatment, and showed large intra-specific variability. Individual values ranged from 0 to 1,220 g m⁻² (fresh weight). Positive relationships were found between xylem water potential, cuticular transpiration and relative water content measured at midsummer, and acorn production during the three studied years. These results suggest that climatic conditions and soil water availability have a strong influence on plant water status, and therefore on acorn development during summer. The results also reflect the ability of this species to adapt to the Mediterranean climate by preserving water during dry periods, which to a large extent can be attributed to stomatal closure at high relative water content levels, and low cuticular transpiration during these periods.