Decomposition and nitrogen mineralization from legume and non-legume crop residues in a subarctic agricultural soil

An understanding of the C and N dynamics of crop residues is important for efficient nutrient management. The present experiment was conducted to determine the rate of mass and N loss from alfalfa, faba bean, barley, and rape crop residues in a subarctic agricultural soil. Mass, C, and N losses were measured from residues contained in mesh bags and placed on the soil surface or buried 15 cm below the surface. The mass loss from October, 1988, to May, 1989, was the same for surface and buried alfalfa, barley, and rape residues, averaging 40, 20, and 61%, respectively, while surface and buried faba bean residue sustained 30 and 40% mass loss, respectively. The mass loss of the buried residues continued over the summer but not of those placed on the soil surface, resulting in an average 23% greater mass loss of the buried materials after 1 year. The N loss from October to May was similar from the surface and from the buried placements for the alfalfa, faba bean, and rape residues, averaging 11.3, 10.3 and 38.4 g N kg^-1 residue, respectively, while the surface and buried barley lost 2.9 and 4.2 g N kg^-1, respectively. The C:N ratio of all of the residues increased during the winter. These data indicate that the rate of decomposition and N mineralization from crop residues in subarctic environments can equal that measured in temperate climates. Furthermore, the concurrent loss of mass and N combined with an increase in the C:N ratio of the residues suggests that physical rather than biological processes were functioning during the winter. Most of the mass and N loss from these residues occurred during the winter, out of phase with crop demand, thereby creating the potential for N loss from the system and inefficient use of crop residue N.     

Kepler-36: a pair of planets with neighboring orbits and dissimilar densities

In the solar system, the planets' compositions vary with orbital distance, with rocky planets in close orbits and lower-density gas giants in wider orbits. The detection of close-in giant planets around other stars was the first clue that this pattern is not universal and that planets' orbits can change substantially after their formation. Here, we report another violation of the orbit-composition pattern: two planets orbiting the same star with orbital distances differing by only 10% and densities differing by a factor of 8. One planet is likely a rocky "super-Earth," whereas the other is more akin to Neptune. These planets are 20 times more closely spaced and have a larger density contrast than any adjacent pair of planets in the solar system.     

Technical note: evaluation of acid detergent lignin, alkaline peroxide lignin, acid insoluble ash, and indigestible acid detergent fiber as internal markers for prediction of alfalfa, bromegrass, and prairie hay digestibility by beef steers.

Six steers (BW = 436 +/- 15 kg) were assigned randomly to alfalfa, bromegrass, or prairie hay diets in a replicated 3 x 3 Latin square design to evaluate the efficacy of different internal markers for estimating OM digestibility (OMD). Internal markers used to estimate OMD included ADL, alkaline peroxide lignin (APL), AIA, and indigestible ADF (IADF), which consisted of a 144-h in vitro incubation (IADFWOUT), indigestible ADF with acid/pepsin pretreatment of feed and orts samples (IADFFEED), or acid/pepsin pretreatment of feed, orts, and fecal samples (IADFALL). Marker-derived estimates of OMD were compared with OMD measured by total fecal collection (TFC). For the alfalfa diet, all marker estimates differed (P less than .05) from the TFC measurement; however, lignin-based procedures (ADL and APL) and IADF with acid/pepsin pretreatment (IADFFEED, IADFALL) were numerically closest to TFC values. Estimates of bromegrass and prairie hay OMD by ADL, APL, and AIA ratio were not different (P greater than .05) from TFC measurement, although AIA seemed to provide the most accurate estimate for prairie hay. All indigestible ADF procedures yielded estimates of forage OMD that differed (P less than .05) from TFC for all forages; acid/pepsin pretreatment of samples (IADFFEED and IADFALL) improved accuracy of the OMD estimates in all forages. Likewise, recovery of indigestible ADF was consistently least among the markers evaluated. These results indicate that APL ratio performed similarly to ADL ratio in estimating forage OMD, that AIA estimated grass OMD very accurately, and that estimation of OMD by indigestible ADF ratio was improved when the procedure was accompanied by an acid/pepsin pretreatment of samples.     

Compatibility between livestock databases used for quantitative biosecurity response in New Zealand

AIM: To characterise New Zealand's livestock biosecurity databases, and investigate their compatibility and capacity to provide a single integrated data source for quantitative outbreak analysis.

METHODS: Contemporary snapshots of the data in three national livestock biosecurity databases, AgriBase, FarmsOnLine (FOL) and the National Animal Identification and Tracing Scheme (NAIT), were obtained on 16 September, 1 September and 30 April 2014, respectively, and loaded into a relational database. A frequency table of animal numbers per farm was calculated for the AgriBase and FOL datasets. A two dimensional kernel density estimate was calculated for farms reporting the presence of cattle, pigs, deer, and small ruminants in each database and the ratio of farm densities for AgriBase versus FOL calculated. The extent to which records in the three databases could be matched and linked was quantified, and the level of agreement amongst them for the presence of different species on properties assessed using Cohen's kappa statistic.

RESULTS: AgriBase contained fewer records than FOL, but recorded animal numbers present on each farm, whereas FOL contained more records, but captured only presence/absence of animals. The ratio of farm densities in AgriBase relative to FOL for pigs and deer was reasonably homogeneous across New Zealand, with AgriBase having a farm density approximately 80% of FOL. For cattle and small ruminants, there was considerable heterogeneity, with AgriBase showing a density of cattle farms in the Central Otago region that was 20% of FOL, and a density of small ruminant farms in the central West Coast area that was twice that of FOL. Only 37% of records in FOL could be linked to AgriBase, but the level of agreement for the presence of different species between these databases was substantial (kappa >0.6). Both NAIT and FOL shared common farm identifiers which could be used to georeference animal movements, and there was a fair to substantial agreement (kappa 0.32–0.69) between these databases for the presence of cattle and deer on properties.

CONCLUSIONS: The three databases broadly agreed with each other, but important differences existed in both species composition and spatial coverage which raises concern over their accuracy. Importantly, they cannot be reliably linked together to provide a single picture of New Zealand's livestock industry, limiting the ability to use advanced quantitative techniques to provide effective decision support during disease outbreaks. We recommend that a single integrated database be developed, with alignment of resources and legislation for its upkeep.     

Lamellar pro-inflammatory cytokine expression patterns in laminitis at the developmental stage and at the onset of lameness: innate vs. adaptive immune response

REASONS FOR PERFORMING STUDY: Recent research has indicated that inflammation plays a role in the early stages of laminitis and that, similar to organ failure in human sepsis, early inflammatory mechanisms may lead to downstream events resulting in lamellar failure. Characterisation of the type of immune response (i.e. innate vs. adaptive) is essential in order to develop therapeutic strategies to counteract these deleterious events. OBJECTIVES: To quantitate gene expression of pro-inflammatory cytokines known to be important in the innate and adaptive immune response during the early stages of laminitis, using both the black walnut extract (BWE) and oligofructose (OF) models of laminitis. METHODS: Real-time qPCR was used to assess lamellar mRNA expression of interleukins-1beta, 2, 4, 6, 8, 10, 12 and 18, and tumour necrosis factor alpha and interferon gamma at the developmental stage and at the onset of lameness. RESULTS: Significantly increased lamellar mRNA expression of cytokines important in the innate immune response were present at the developmental stage of the BWE model, and at the onset of acute lameness in both the BWE model and OF model. Of the cytokines characteristic of the Th1 and Th2 arms of the adaptive immune response, a mixed response was noted at the onset of acute lameness in the BWE model, whereas the response was skewed towards a Th1 response at the onset of lameness in the OF model. CONCLUSIONS: Lamellar inflammation is characterised by strong innate immune response in the developmental stages of laminitis; and a mixture of innate and adaptive immune responses at the onset of lameness. POTENTIAL RELEVANCE: These results indicate that anti-inflammatory treatment of early stage laminitis (and the horse at risk of laminitis) should include not only therapeutic drugs that address prostanoid activity, but should also address the marked increases in lamellar cytokine expression.