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981.
Chang-Ming Li Chen-Xia Lei Yu-Ting Liang Chang-Qing Chen Bo Sun 《Paddy and Water Environment》2017,15(3):581-592
Rhizosphere microbes play a cardinal role in transformation and crop uptake of arsenic (As), thereby relieving or intensifying the risk of As contamination in the food webs. How rhizosphere microbiomes respond to As contamination in different paddy soils and rice growth stages is still unclear. Here, we conducted a rice pot experiment to address the effects of rice developmental stage and As contamination on the rhizosphere microbial communities in two contrast paddy soils, a yellow clayey paddy soil (YP, pH 5.1, soil organic matter 20.8 g/kg) and red paddy soil (RP, pH 6.2, soil organic matter 46.1 g/kg). The rhizosphere microbial communities were investigated using phospholipid fatty acids analysis at tillering, panicle initiation, and maturity stages. The results showed that rice growing in YP soil accumulated 2-10 times higher contents of As in root than that in RP soil. There was a significant effect of rice growing stage, independent of soil types and As treatment, on rhizosphere microbial community composition in both YP and RP soils as depicted by canonical correspondence analysis. As contamination significantly altered rhizosphere microbial community composition only in YP soil, which showed the soil type dependency of the As contamination effect. In RP soil, the higher content of soil organic matter reduced the impact of As contamination. Soil pH explained more percentage of variation in microbial community composition than soil DOC and DON did. These influences of soil physiochemical properties on heavy metal available and rhizosphere microbial community may lay the foundation for exploration of bioremediation potential. 相似文献
982.
Xiaomin Feng Chen Wang Jianzong Nan Xiaohui Zhang Rongsheng Wang Guoqiang Jiang Qingbo Yuan Shaoyang Lin 《Rice》2017,10(1):35
Background
Kongyu 131 is an elite japonica rice variety of Heilongjiang Province, China. It has the characteristics of early maturity, superior quality, high yield, cold tolerance and wide adaptability. However, there is potential to improve the yield of Kongyu 131 because of the relatively few grains per panicle compared with other varieties. Hence, we rebuilt the genome of Kongyu 131 by replacing the GRAIN NUMBER1a (Gn1a) locus with a high-yielding allele from a big panicle indica rice variety, GKBR. High-resolution melting (HRM) analysis was used for single nucleotide polymorphism (SNP) genotyping.Results
Quantitative trait locus (QTL) analysis of the BC3F2 population showed that the introgressed segment carrying the Gn1a allele of GKBR significantly increased the branch number and grain number per panicle. Using 5 SNP markers designed against the sequence within and around Gn1a, the introgressed chromosome segment was shortened to approximately 430 Kb to minimize the linkage drag by screening recombinants in the target region. Genomic components of the new Kongyu 131 were detected using 220 SNP markers evenly distributed across 12 chromosomes, suggesting that the recovery ratio of the recurrent parent genome (RRPG) was 99.89%. Compared with Kongyu 131, the yield per plant of the new Kongyu 131 increased by 8.3% and 11.9% at Changchun and Jiamusi, respectively.Conclusions
To achieve the high yield potential of Kongyu 131, a minute chromosome fragment carrying the favorable Gn1a allele from the donor parent was introgressed into the genome of Kongyu 131, which resulted in a larger panicle and subsequent yield increase in the new Kongyu 131. These results indicate the feasibility of improving an undesirable trait of an elite variety by replacing only a small chromosome segment carrying a favorable allele.983.
984.
The Flowering Locus T (FT)-like genes of angiosperms are highly conserved. The FT-encoded proteins include a phosphatidylethanolamine-binding domain that is involved in the control of the shoot apical meristem identity and flowering time. In the present study, FT genes were investigated in 20 bamboo species that are grouped into sympodial, mixed and scattered bamboos based on their morphology. All examined orthologous FT genes consisted of four exons and three introns. Their encoded protein sequences contained the critical amino acid residues Tyr85, Glu109, Leu128, Tyr134, Trp138, Arg139, Gln140 and Asn152, of which each possesses a biological function. The DNA sequences were rich in single nucleotide polymorphism (SNP) sites. The SNP frequency was 1 SNP/16.8 bp, and the nucleotide diversity (π) equaled 0.265. Some SNPs altered restriction enzyme sites or resulted in changes in amino acid contents. The correlation analysis showed that several SNPs were informative in relation to the underground rhizome types of bamboos. Therefore, FT polymorphisms could be used as a tool to identify the underground rhizome types of bamboos. The phylogenetic tree constructed based on the FT gene sequences showed that the obtained clustering was consistent with the underground rhizome types. The SNP markers developed in the present study will provide information on the genetic diversity of bamboos and they can aid taxonomic study as well. 相似文献
985.
Interspecific cross‐hybrids of Nicotiana tabacum L. cv. (gla.) S ‘K326’ with Nicotiana alata 下载免费PDF全文
Jugou Liao Jinran Dai Shiyi Yang Xiaoli Zhou Longhui Ren Zhuangzhuang Chen Haili He Suiyun Chen 《Plant Breeding》2017,136(3):427-435
In order to introduce the Tomato Spotted Wilt Virus (TSWV) resistance from Nicotiana alata into Nicotiana tabacum, a cytoplasmic male sterility (CMS) line of N. tabacum (N. tabacum L. cv. (gla.) S ‘K326’), was successfully crossed with N. alata. Despite a high DNA content variability, F1 hybrids could be classified in two subgroups, a major one encompassing fertile hybrids morphologically similar to their tobacco maternal parent but TSWV sensitive, and a minor one displaying sterile hybrids showing an intermediate phenotype and TSWV resistant. In order to elucidate the unexpected fertility recovery of the fertile F1 plants, some N. alata fertility restoration ppr genes were cloned and were shown to be differentially expressed between parental lineages as well as between both F1 subgroups, suggesting that N. alata contains fertility restoring allele able to overcome the CMS of N. tabacum. 相似文献
986.
Huaduo Zhang Jingxian Liu Tiantian Jin Yaqun Huang Jingtang Chen Liying Zhu Yongfeng Zhao Jinjie Guo 《Euphytica》2017,213(4):90
Trace metal elements are essential in daily diets for human health and normal growth. Maize is staple food for people in many countries. However, maize has low mineral concentration which makes it difficult to meet human requirements for micronutrients. The objective of this study was to identify quantitative trait locus (QTL) and predict candidate genes associated with mineral concentration in maize grain. Here, a recombinant inbred line population was used to test phenotype of zinc (Zn), iron (Fe), copper (Cu) and manganese (Mn) concentrations in six environments and then a QTL analysis was conducted using single environment analysis along with multiple environment trial (MET) analysis. These two strategies detected a total of 64 and 67 QTLs for target traits, respectively. Single environment analysis revealed 13 QTL bins distributed on seven chromosomes. We found that five candidate genes associated with mineral concentration were located in the same intervals identified by Comparative mapping of meta-QTLs in our previous study. The genetic and phenotypic correlation coefficients were depended on the nutrient traits and they were significant between Fe and Zn, Fe and Cu, Fe and Mn in all environments. The results of this study illustrated the genetic correlation between maize grain mineral concentrations, and identified some promising genomic regions and candidate genes for further studies on the biofortification of mineral concentration in maize grain. 相似文献
987.
Zhengong Yin Huidong Qi Qingshan Chen Zhanguo Zhang Hongwei Jiang Rongsheng Zhu Zhenbang Hu Xiaoxia Wu Candong Li Yong Zhang Chunyan Liu Guohua Hu Dawei Xin Zhaoming Qi 《Plant Breeding》2017,136(5):688-698
Plant height is closely related to seed yield of soybean. The goal of this study was to identify important loci affecting soybean plant height using meta‐analysis based on a reference physical map. Plant height related to QTLs was mapped across eight years with a RIL population by WinQTLCart v2.5. 182 QTLs related to plant height of soybean from database and our research were collected, and each QTL was projected onto the soybean physical map by software BioMercator v2.1. The confidence interval of meta‐QTL ranged from 0.09 to 5.07 Mb, and the mean phenotypic variance ranged from 4.9% to 73.0%. Furthermore, 4,259 candidate genes were located in these consensus QTLs, and 40 of them were involved in the plant growth and stem elongation and annotated as plant hormone signal transduction (pathway ID ko04075) in KEGG pathway. These results would lay a foundation for fine mapping of QTLs/genes related to plant height and marker‐assisted selection for breeding in soybean. 相似文献
988.
番茄绿果与橙果间果实颜色及主要色素含量的遗传研究 总被引:1,自引:0,他引:1
对番茄组合绿樱(绿果)×金珠1号(橙果)的6个世代遗传群体(P1、P2、F1、BC1、BC2和F2)进行果色性状、番茄红素含量、叶绿素含量和胡萝卜素含量等的遗传规律分析。结果表明:正反交F1的果色性状无明显差异,而色素含量存在显著差异;说明番茄果色性状受核基因控制,而色素含量遗传除受核基因控制外还可能存在胞质效应。采用多世代联合分析法的分析结果表明,番茄绿果与橙果间的果色性状符合2对加性主基因+加性-显性多基因(MX2-A-AD)遗传模型,其BC1、BC2和F2主基因遗传率分别为73.42%、78.25%和61.41%,多基因遗传率分别为22.87%、15.35%和34.94%,即果色性状遗传的主基因遗传力较强;叶绿素含量符合1对负向显性主基因+加性-显性多基因(MX1-AEND-AD)遗传模型,其BC1、BC2和F2主基因遗传率分别为0、1.73%和0.65%,多基因遗传率分别为45.47%、0和37.82%,即主基因遗传力在BC2群体中最高,多基因遗传力在BC1群体中最高;番茄红素含量与胡萝卜素含量均符合2对加性-显性-上位性主基因+加性-显性多基因(MX2-ADI-AD)遗传模型,其BC1、BC2和F2主基因遗传率分别为75.74%、1.79%、84.26%和61.53%、87.21%、81.05%,多基因遗传率分别为20.32%、74.12%、12.68%和0.68%、0、0,表明番茄红素含量和胡萝卜素含量的主基因遗传力较强。 相似文献
989.
990.
Generation and analysis of expressed sequence tag sequences from a soft‐seeded pomegranate cDNA library 下载免费PDF全文
The cultivation of soft‐seeded pomegranate is an important direction in pomegranate breeding. To comprehensively understand the molecular mechanisms involved in the formation of soft‐seeded pomegranate (Punica granatum. var. Hongmanaozi), we established an expressed sequence tag (EST) resource. Two thousand valid sequences were generated, from which 907 unigenes were obtained after initial assembly using the clustalx program. Among these unigenes, 51 showed no similarity to any protein in the public databases, 433 matched with proteins of unknown function, and 423 matched with proteins of known or putative functions. The 423 unigenes were further classified into 13 categories. Among these categories, protein synthesis, cell structure, protein destination and storage, secondary metabolism, signal transduction and transporters accounted for 8%, 8%, 4%, 7%, 6% and 17%, respectively. We also successfully developed 10 highly polymorphic expressed sequence tag‐simple sequence repeat (EST‐SSR) markers for pomegranate. The results provide a new tool for future activities in pomegranate breeding. 相似文献