Development of specific PCR primers for identification and detection of <Emphasis Type="Italic">Phytophthora capsici</Emphasis> Leon

A PCR-based method was developed for the identification and detection of Phytophthora capsici in pepper plants. Three PCR primers (CAPFW, CAPRV1 and CAPRV2) specific for P. capsiciwere designed based on the sequence of its internal transcribed spacer regions. CAPFW/CAPRV1 amplify a 452 bp product from P. capsici DNA whereas CAPFW/CAPRV2 a 595 bp fragment; neither set amplifies DNA from pepper or several fungi pathogenic to pepper. In conventional (single-round) PCR, the limit of detection was 5 pg DNA for both primer sets, whereas in nested PCR the detection limit for both was of 0.5 fg. However, when the dilution series of target DNA were spiked with plant DNA, amplification declined two-fold in both conventional and nested PCR. The CAPFW/CAPRV2 set in conventional PCR was used to detect P. capsici DNA in inoculated plants. Detection occurred as soon as 8h post-inoculation in stem samples from infected but still symptomless plants. The method was also tested to detect fungal DNA in infected soils.     

Fusarium head blight and mycotoxin contamination of wheat,a review

Summary An infection of bread wheat by fusarium head blight contaminates the crop with mycotoxins, particularly deoxynivalenol (DON) and nivalenol (NIV). The toxicity and natural occurrence of these mycotoxins in wheat are reviewed. Based on 8 years data of fusarium head blight epidemics of wheat in the Netherlands, DON contamination of the grain was estimated. Fusarium head blight ratings averaged an infection of 1.7% of all spikelets; estimates for DON contamination averaged 0.9 mg kg^–1. Taking a guideline level for DON in uncleaned bread wheat of 2 mg kg^–1, in 1979 and 1982 a wheat crop was produced with estimated DON concentrations above the limit of tolerance. Human and animal exposure to mycotoxins in the Netherlands appears to be small but chronic. The information presented in this paper illustrates the need for an annual evaluation of the crop for fusarium head blight incidence and mycotoxin content, and the necessity of fusarium head blight resistant wheat cultivars.Samenvatting Aaraantasting van tarwe doorFusarium culmorum enFusarium graminearum leidt tot vorming van mycotoxinen in het graan, waarvan deoxynivalenol (DON) en nivalenol (NIV) de belangrijkste toxinen zijn. In dit artikel wordt een overzicht gegeven van de toxicologische aspecten, en het voorkomen van deze toxinen in tarwe. Informatie over DON en NIV in tarwe in West-Europa is schaars. Gebaseerd op gegevens vanFusarium epidemieën in de jaren 1979–1986 wordt een schatting gegeven van de concentratie DON in Nederlandse tarwe. Rekening houdend met de herkomst en verwerking van tarwe, blijken zowel in dierlijk als menselijk voedsel lage concentraties DON chronisch voor te komen. Op basis van een maximaal toelaatbare dagelijkse dosis DON van 3 g kg^–1 lichaamsgewicht is de schatting van de dagelijkse opname van DON in het jaar volgend op de oogst van 1982 net op de grens. Zowel een jaarlijkse inventarisatie vanFusarium aantasting en DON besmetting van het graan, als de ontwikkeling vanFusarium-resistente rassen zijn noodzakelijk.     

烟草线条病毒RT-PCR检测方法

根据已报道的烟草线条病毒外壳蛋白基因序列，设计出一对特异性引物，提取大豆病叶的总RNA，反转录成cDNA，PCR扩增出约400bp大小的产物，产物克隆到pGEM-T Easy载体上，转化大肠杆菌DH 5α，抽提的质粒用Not Ⅰ酶切，出现430bp大小的目标插入片段。经序列测定确认了插入片段的大小为404bp。     

The establishment of Taraxacum officinale plants in grassland

Factors involved in the establishment of Taraxacum officinale (dandelion) seedlings in grasslands and plant mortality in the first growing season were studied during 2008–2011. The study was conducted at 11 grassland sites that differed in the quantity of seed rain and the intensity of seedling predation by slugs. In April, of each study year, 10 plots open to the sedimentation of naturally dispersed seeds were established at each site, five plots of which were also sown with 250 T. officinale seeds each. The amount of natural seed rain, slug feeding activity and number of plants in each plot were then recorded at monthly intervals. Seed rain and seedling predation accounted for c. 50% of the variation in seedling establishment. Populations of established seedlings then declined through October, at which point they were at 25% of the original abundance on average. The percentage of plants that survived varied among sites and years. The temporal and spatial variation in T. officinale establishment and survival of young plants was enormous, even within a small area. Predation of seedlings by slugs can effectively prevent the establishment of T. officinale in grassland. This only occurred, however, at slug abundances not acceptable under conditions of public access.     

Citrus Black Rot is Caused by Phylogenetically Distinct Lineages of Alternaria alternata

ABSTRACT Phylogenetic analysis revealed that isolates of Alternaria alternata causing black rot of citrus were associated with six well-supported evolutionary lineages. Isolates recovered from brown spot lesions on Minneola tangelo, leaf spot lesions on rough lemon, and healthy citrus tissue and noncitrus hosts were related closely to isolates from black-rotted fruit. Phylogenies estimated independently from DNA sequence data from an endopolygalacturonase gene (endoPG) and two anonymous regions of the genome (OPA1-3 and OPA2-1) had similar topologies, and phylogenetic analysis was performed on the combined data set. In the combined phylogeny, isolates from diverse ecological niches on citrus and noncitrus hosts were distributed in eight clades. Isolates from all lineages, regardless of ecological or host association, caused black rot in fruit inoculation assays, demonstrating that small-spored Alternaria isolates associated with different ecological niches on citrus and other plant hosts are potential black rot pathogens. These data also indicated that the fungi associated with black-rotted fruit do not form a natural evolutionary group distinct from other Alternaria pathogens and saprophytes associated with citrus. The use of the name A. citri to describe fungi associated with citrus black rot is not justified and it is proposed that citrus black rot fungi be referred to as A. alternata.     

Variability in seedling emergence for European and North American populations of Abutilon theophrasti

Abutilon theophrasti is a weed that is spreading worldwide and that has had to adapt to different combinations of environmental conditions. Wide interpopulation variability has been reported regarding dormancy and germination. This variability, controlled by the interaction of genetic diversity and maternal effect, could hinder the adoption of Integrated Weed Management (IWM) tools. A collaborative project was conducted to compare emergence dynamics of 12 European and North American populations under diverse environmental conditions. The main aim was to assess interpopulation variability and explain this according to environmental conditions in the seed collection sites. Seeds were sown at six experimental sites, and seedling emergence was monitored. The AlertInf model was tested to evaluate its ability to predict emergence dynamics of the different populations. A wide interpopulation variability was observed for emergence percentage and dynamics with consistent trends across sites and related to different seed dormancy levels. Populations from Catalonia, Iowa and Minnesota reached higher emergence percentage with earlier and concentrated emergence flushes probably due to low dormancy level, while populations from Croatia, Serbia and Hungary, given their low average emergence percentage, presented high dormancy levels. Good predictive accuracy of AlertInf model was obtained at the different sites, confirming the possibility of adopting it across a wide range of environmental conditions. Achieving a better knowledge of interpopulation variability can allow specific control strategies to be designed, facilitating the replacement of solely herbicide‐based management with true IWM.     

Distribution and diversity of leaf-cutting ants in Northeastern Argentina: species most associated with forest plantations

Abstract

Leaf-cutting ants (LCA) are considered one of the main herbivores and one of the most destructive pest insects of the Neotropics. Northeastern Argentina harbors the greatest species richness of these ants and in turn comprises the highest surface with forest plantations. Our aim was to establish which species of leaf-cutting ants are most commonly associated with forest plantations by analyzing their geographic distribution using published and unpublished species occurrence data. Also, estimate their potential areas of distribution along a latitudinal gradient that entirely encompasses northeastern Argentina using Ecological Niche Modeling. Only seven of the 20 species recorded were strongly associated with productive systems along the gradient, but only 2–3 species in each region could be considered high-risk species for forest plantations. High-risk species composition shows a turnover between regions. Our models show the potential distribution areas where LCA could become more abundant and dominant, and possibly causing a detrimental effect on the forest plantations in the studied region. We find that ecological niche models are useful tools to assess the environmental suitability of important LCA.     

黑龙江省大豆疫霉根腐病调查与病原分离

１９９６年对黑龙江省东部和中部大豆产区２３个市、县的大豆苗期疫霉根腐病进行了调查、研究,应用ＰＢＮＩＣ疫霉选择性培养基分离大豆疫霉根腐病病原菌,从牡丹江、穆棱、林口和佳木斯豆田具疫霉根腐症状的大豆植株上分离到大豆疫霉根腐病菌,并从根腐病株上单独或与大豆疫霉菌同时分离到终极腐霉菌,研究进一步证实我国黑龙江省有大豆疫霉根腐病。调查发现,大豆疫霉根腐病和终极腐霉根腐病主要发生在土质粘重、土壤含水量高或易积水的田块。