Molecular identification of blast resistance genes in rice landraces from northeastern India

Rice blast disease caused by the fungus Magnaporthe oryzae is one of the most devastating diseases causing huge losses worldwide. In the present study, major blast resistance genes were investigated in landraces originating from northeastern India. Based on phenotypic evaluation, 288 landraces were classified into three distinct groups: resistant (75), moderately resistant (127) and susceptible (86). The genetic frequencies of the 18 major blast resistance genes were between 6.2% and 27.4%, with only two genotypes possessing a maximum of nine blast resistance genes. The cluster and population structure analysis grouped the landraces into two groups. Through principal coordinate analysis, the scatter plots partitioned the resistant and moderately resistant landraces into different groups. Analysis of molecular variance showed maximum (96%) diversity within populations and least (4%) diversity between populations. Association analysis identified six markers, CRG4_2, RM72, tk59-2, pi21_79-3, RM1233 and RM6648, that are significantly associated with blast disease and explained a phenotypic variance of 1.1–6.5%. The associated genes could be used in marker-assisted rice breeding programmes for gene pyramiding to develop rice varietal resistance against blast disease. The present study represents a valuable blast resistance genetic resource that could be used for identification of new R genes, donors for blast resistance, and genomic studies.     

Biocontrol potential of Pseudomonas azotoformans,Serratia marcescens and Trichoderma virens against Fusarium wilt of Dalbergia sissoo

Wilt disease caused by Fusarium solani is a serious constraint to Dalbergia sissoo (shisham) plantations in northern India. In this study, the antagonistic potential of 40 bacterial isolates recovered from rhizophere soil of healthy shisham trees, and a well‐characterized Trichoderma species (Trichoderma virens) were tested for their possibility as biocontrol agents for F. solani. Two promising isolates (S1 and S15) were identified which inhibited pathogen growth, caused chitin degradation, produced siderophores and solubilized phosphate in vitro. Isolate S15 scored highest for hydrogen cyanide (HCN) production while isolate S1 was a non‐HCN producer. These two isolates were identified as Serratia marcescens (S1) and Pseudomonas azotoformans (S15) following sequence analysis of 16S rDNA. In dual culture assays, T. virens caused 80% inhibition of mycelial growth of the test fungus. The three selected antagonists when tested in planta in the glasshouse completely suppressed production of wilt symptoms on 12‐month‐old shisham plants. Further work is needed to ascertain the potential of these isolates to be used as biocontrol agents to manage shisham wilt under field conditions.     

Colchicine treatment of different varieties of potatoes in West Bengal

Summary Colchicine treatment of sprouted tubers before planting increased yield in 17 out of the 20 varieties reported. In some varieties this effect was maintained in the two succeeding years in which the tubers from the various treatments were grown, although no further treatment had been given. The optimum duration of treatment varied between varieties as did overall response. Treatment depressed yield in a few varieties, while in others yield increase was delayed. In 8 out of the 20 varieties abnormalities in tuber shape occurred. Treatment had no effect on maturation except in a few cases where a retardation of 2 or 3 days was recorded.

---

Zusammenfassung Die Colchicin-Behandlung von vorgekeimten Knollen steigerte den Ernteetrag bei 17 der angeführten 20 Sorten. Bei manchen Sorten blieb diese Wirkung durch zwei aufeinanderfolgende Jahre in welchen die Knollen nach den verschiedenen Behandlungen gezogen wurden, erhalten, obwohl keine weitere Behandlung angewandt wurde. Die optimale Dauer der Behandlung war je nach den Sorten verschieden, ebenso das allgemeine Ansprechen auf die Behandlungen. Bei wenigen Sorten führte die Behandlung zu einer Ertragsdepression, w?hrenddem bei anderen die Ertragserh?hung verz?gert wurde. Bei 8 der 20 Sorten kamen Abnormit?ten der Knollenform vor. Die Behandlung hatte keine Wirkung auf die Reife ausser in einigen F?llen in welchen eine Versp?tung von 2 bis 3 Tagen verzeichnet wurde.

---

Résumé Le traitement de tubercules germés à la colchicine avant la plantation a fait augmenter le rendement de 17 des 20 variétés étudiées. Dans certaines variétés, cet effet se manifesta pendant les deux années successives où les tubercules soumis aux différents traitements furent cultivés, bien que nul autre traitement ne f?t appliqué. La durée optimale du traitement variait d'une variété, à l'autre, de même que la réponse générale au traitement. Le traitement réduisit le rendement de quelques variétés, tandis que dans d'autres cas, l'augmentation du rendement se manifesta avec un certain retard. Dans 8 variétés sur 20, il fut constaté des anomalies de conformation des tubercules. Le traitement n'influen?ait pas la maturation, sauf dans quelques cas où il fut observé un retard de 2 ou 3 jours.

     

Improved feed intake and body weight change in sheep treated with dexamethasone at entry into pens or feedlots

Treatment with the synthetic glucocorticoid dexamethasone sodium phosphate increased the feed intake of sheep within 24 h. A single treatment with the longer-acting compound dexamethasone trimethylacetate had a slower effect, but resulted in improved feed intake and enhanced body weight gain over a period of 7 to 14 days. Treatment was effective in sheep housed individually and in sheep penned in groups. The improvement in body weight gain disappeared 15 to 20 days after a single treatment, but in most studies treated sheep had less variability in weight change than untreated sheep at this time. A statistically significant increase in body weight gain was observed in 8 of 11 trials; in the other 3 trials, it appeared that the feed intake of the untreated sheep was already maximal. Wethers treated with dexamethasone trimethylacetate on arrival at an assembly point for live export arrived in the Middle East 23 days later with a lower mean weight loss, partly because fewer sheep lost a significant amount of weight.     

Identification and Pathogenicity of Pseudomonas aeruginosa DJ1990 on Tail and Fin Rot Disease in Spotted Snakehead

Tail and fin rot disease (TFRD) is a big issue in the production of spotted snakehead, Channa punctata Bloch. The aims of the present study were to isolate and identify the bacterial pathogen causing TFRD, to detect histopathological changes in tissues (fin, tail, liver, and kidney), and to ascertain the antibiotic sensitivity pattern of the isolate. Out of six bacterial isolates, only the isolate DJ1990 was found to be the causal candidate of TFRD in C. punctata. Identical histopathological changes were detected in tail, fin, liver, and kidney under light and scanning electron microscope in both collected diseased fish and artificially infected fish. The isolate was identified as Pseudomonas aeruginosa strain DJ1990 (National Center for Biotechnology Information Ace. No. KX709967) based on the biochemical characterization tests and 16S rDNA sequence‐based phylogeny analysis. Artificial challenge test demonstrated that the strain DJ1990 was highly virulent (100% mortality at 48 h of postinjection period at the concentration of 1.5 × 10⁷ CFU/g of body weight) for C. punctata. The isolate exhibited sensitivity to the broad‐spectrum antibiotics but was resistant against aztreonum. To the best of our knowledge, this is the first report of P. aeruginosa as a TFRD‐causing candidate in C. punctata.     

Effect of bandaging on second intention healing of wounds of the distal limb in horses

Objective   To evaluate the effect of a non-occlusive dressing incorporated in a 3-layer bandage on second intention healing of wounds of the distal portion of the limb.
Study Design   Untreated wounds in 33 adult horses used in four studies using the same wound-healing model conducted over 5 years.
Methods   Standardised, full-thickness wounds were made in the skin overlying the dorsomedial aspect of the mid-metacarpus; 17 horses were bandaged with a non-occlusive dressing covered by gauze-coated cotton wool that was compressed with adhesive tape; 16 horses were left unbandaged. Wounds were photographed weekly for 9 weeks and the images were analysed electronically.
Results   There were significant effects associated with bandage (P < 0.0001), week (P < 0.001), and bandage by week interaction (P < 0.0001). There was no difference in wound area at the first time-point after wound creation (P = 0.38). After week 1, there was a difference between bandaged and unbandaged wounds in wound area at each measurement until the end of the study. Bandaged wounds showed greater and more prolonged retraction. Unbandaged wounds retracted for 2 weeks before beginning to contract, whereas bandaged wounds continued to retract for 3 weeks. In bandaged wounds excess granulation tissue required regular trimming, but not in unbandaged wounds. There was no difference between groups in the total days to healing or the overall rate of healing.
Conclusions   These results should be treated with caution until validated with contemporaneous, controlled studies. Covering a wound with a non-occlusive dressing in a 3-layer bandage led to greater wound retraction, modulated the rate of wound contraction and promoted excessive granulation tissue. If excessive granulation tissue is excised regularly, bandaging has no effect on total time to healing.     

Narrow sense heritability estimates of bacterial leaf spot resistance in pseudo F2 (F1) population of mulberry (Morus spp.)

Bacterial leaf spot incited by Xanthomonas campestris pv. mori is a devastating foliar disease of mulberry reported globally. Host plant resistance is the most sustainable and economic control measure but so far unexplored. Highly heterozygous plant behaviour and scant genetic information of bacterial leaf spot resistance limits a targetted breeding approach in mulberry. In the present research eight pseudo-F₂(F₁)full-sib progenies derived from selected resistant and susceptible sources were evaluated symptomatically for bacterial leaf spot resistance under natural disease occurrence in 2008 and 2009. Significant variation for bacterial leaf spot resistance was observed in the parents and progenies. Broad sense heritability estimate (0.9) indicates that selection of resistant genotypes can be useful for exploitation in future advanced breeding programs for mulberry. High narrow sense heritability estimates (0.76)[2008] and (0.79)[2009] suggest additive gene effects for the disease resistant trait. The continuous frequency distribution of diseases severity across the progenies indicates that bacterial leaf spot resistance in mulberry may be inherited quantitatively.     

Action of the fungicide tridemorph on the glucose,lactate and succinate dehydrogenase activities of some tridemorph-sensitive and -resistant bacteria

The systemic morpholine fungicide tridemorph, which is known to exert its antifungal action through inhibition of ergosterol biosynthesis, can also inhibit the growth of organisms which are incapable of sterol biosynthesis. It was found to inhibit strongly glucose and lactate dehydrogenase activities in cultures of four Gram( +) bacteria, Rhodococcus sp. AK 1, Bacillus cereus Frankland & Frankland, Bacillus subtilis (Ehrenberg) Cohn, Nocardia asteroides and a Gram(?) bacterium, Rhizobium leguminosarum. Growth of these bacteria was inhibited by tridemorph at concentrations between 7 and 60 mg litre^?1. In contrast, similar dehydrogenase activities in other Gram(?) organisms, Escherichia coli Cast. & Chalm. and Azotobacter vinelandii, which showed no growth inhibition at 200 mg litre ^?1 tridemorph, were either not inhibited or inhibited only slightly. Similarly, succinate dehydrogenase activity in Rhodococcus sp. AK 1 was more strongly inhibited by tridemorph than that in E. coli. In cell-free extracts of Rhodococcus sp. AK1 and E. coli, lactate dehydrogenase activity was also inhibited by tridemorph to a much greater extent in the sensitive strain (63%) than in the resistant ones (8%).     

Prevalence of latent cases of Babesia equi infection in some parts of North West India as measured by the capillary agglutination test

The prevalence of Babesia equi infection in north west India was assessed by means of the capillary tube agglutination (CA) test. The particulate antigen used in the test was potent and no cross reaction with other related haemaprotozoa was observed. The serological survey showed that from 323 horses from 3 localities there was an overall incidence of 50.1 per cent. In Haryana the incidence was 38.3 per cent in the 196 horses tested, in Uttar Pradesh it was 47.2 per cent from 72 animals and in Rajasthan it was 96.4 per cent from 55 horses.