Interdisciplinary historical vegetation mapping for ecological restoration in Galapagos

Improving our knowledge of pre-anthropogenic landscapes is vital for understanding landscape-scale heterogeneity and for setting goals and objectives for ecological restoration. This is especially important in highly modified landscapes that contain few remnants of pre-impact ecosystems. This study aims to develop new methodology to improve understanding of historical vegetation, using the now-degraded inhabited highlands of the Galapagos Islands as a case study. Our multidisciplinary approach innovatively combines data from interviews with residents who were familiar with the vegetation before most degradation occurred with the more traditional sources of historical aerial photography and information from early explorer and scientist reports. We reconstruct historical vegetation across the landscape by mapping it in the year 1960 and discussing this map in the historical context of anthropogenic change. Our results confirm published vegetation types but also define some other types not previously described, and suggest much greater spatial, temporal and structural heterogeneity than commonly understood. This result can be used by Galapagos land managers to better match species assemblages with sites and plan restoration actions that will maximise resilience against the ongoing and future threats of climate change and species invasions. Our methodology can be applied in extensive areas of the world where the majority of anthropogenic disturbance to natural ecosystems has been within the past 60 years.     

A new, multi-scaled graph visualization approach: an example within the playa wetland network of the Great Plains

We employed a sliding-window approach at multiple scales (window sizes and dispersal distances) to calculate seven standard graph-theoretical metrics within a subset of a large, freshwater wetland network. In contrast to most graph analyses, which quantify connectivity at a single (global) scale or at a patch-level scale, a multi-scaled, sliding-window approach provides an assessment that bridges these two approaches to examine patch clusters. As a case study we focused on a subset of a habitat patch network in a ~20,000 km² area encompassing 2,782 playa wetlands in the panhandle of Texas. Playas are seasonal wetlands of the southern Great Plains of North America that form a network of regional habitat resources for wildlife. The large size of this network meant that global metrics failed to capture localized properties, so we used contour mapping to visualize continuous surfaces as functions of playa density, linkage density, and other topological traits at different window sizes and dispersal distances. This technique revealed spatial patterns in the components (i.e., the network properties of regions of the landscape at a given dispersal scale), with the spatial scale of habitat clustering varying with the size of the sliding window and dispersal distance. Using a tool familiar to landscape ecology (sliding-window methodology) in a novel way (to examine ecological networks at multiple scales), our approach provides a way to represent ecologically determined local-scale graph properties and illustrates how a multi-scaled approach is useful in examining habitat connectivity to investigate graph properties.     

Zoning,land use,and urban tree canopy cover: The importance of scale

Declining urban tree canopy cover in the United States underscores the importance of elucidating factors that influence the distribution of urban trees. This is particularly relevant as most urban trees are located on private property while their canopies maintain ecosystem services that constitute public goods. Thus, municipalities establish institutions in the form of canopy cover goals and various policies to incentivize private actions to meet those goals. However, urban land use, as governed by municipal zoning policies, plays a role in the abundance, distribution, and potential future location of urban trees independent of policies meant specifically to manage canopy. For instance, previous research finds that lands zoned for residential and park development have the highest canopy cover relative to other land uses. Yet, little research has explored whether this conclusion holds across scales of analysis and how it might influence our understanding of potential canopy cover and relative canopy cover. Thus, we ask, does the nature of the relationship between zoning and canopy cover change between aggregated and disaggregated zoning scales and how might this knowledge improve the sustainability of urban forest management? To answer this question, we classified high resolution National Agriculture Imagery Program (NAIP) images of Bloomington, Indiana land cover and compared existing, potential and relative canopy cover across aggregated and disaggregated zones. Results demonstrate an important exception to the oft-cited theory that residential lands have higher canopy cover, a conclusion that our data supports only at the scale of an aggregated interpretation of zoning. At a disaggregated scale, residential high density zones are significantly different than all other residential zones and more akin to commercial zones in terms of all canopy metrics. For urban forest managers and urban planners, this suggests the relevance of fine-scale variation in land-use policies and related canopy cover policies.     

Collagen fibril alignment and deformation during tensile strain of leather: a small-angle X-ray scattering study

The distribution and effect of applied strain on the collagen fibrils that make up leather may have an important bearing on the ultimate strength and other physical properties of the material. While sections of ovine and bovine leather were being subjected to tensile strain up to rupture, synchrotron-based small-angle X-ray scattering (SAXS) spectra were recorded edge-on to the leather at points from the corium to the grain. Measurements of both fibril orientation and collagen d spacing showed that, initially, the fibers reorient under strain, becoming more aligned. As the strain increases (5-10% strain), further fibril reorientation diminishes until, at 37% strain, the d spacing increases by up to 0.56%, indicating that significant tensile forces are being transmitted to individual fibrils. These changes, however, are not uniform through the cross-section of leather and differ between leathers of different strengths. The stresses are taken up more evenly through the leather cross-section in stronger leathers in comparison to weaker leathers, where stresses tended to be concentrated during strain. These observations contribute to our understanding of the internal strains and structural changes that take place in leather under stress.     

Impact of short-term intake of red wine and grape polyphenol extract on the human metabolome

Red wine and grape polyphenols are considered to promote cardiovascular health and are involved in multiple biological functions. Their overall impact on the human metabolome is not known. Therefore, exogenous and endogenous metabolic effects were determined in fasting plasma and 24 h urine from healthy male adults consuming a mix of red wine and grape juice extracts (WGM) for 4 days in a placebo-controlled, crossover study. Syringic acid, 3-hydroxyhippuric acid, pyrogallol, 3-hydroxyphenylacetic acid, and 3-hydroxyphenylpropionic acid were confirmed as the strongest urinary markers of WGM intake. Overall, WGM had a mild impact on the endogenous metabolism. Most noticeable were changes in several amino acids deriving from tyrosine and tryptophan. Reductions in the microbial metabolites p-cresol sulfate and 3-indoxylsulfuric acid and increases in indole-3-lactic acid and nicotinic acid were observed in urine. In plasma, tyrosine was reduced. The results suggest that short-term intake of WGM altered microbial protein fermentation and/or amino acid metabolism.     

Persistence of a biocontrol Pseudomonas inoculant as high populations of culturable and non-culturable cells in 200-cm-deep soil profiles

Little is known about the ecology of soil inoculants used for pathogen biocontrol, biofertilization and bioremediation under field conditions. We investigated the persistence and the physiological states of soil-inoculated Pseudomonas protegens (previously Pseudomonas fluorescens) CHA0 (10⁸ CFU g^?1 surface soil) in different soil microbial habitats in a planted ley (Medicago sativa L.) and an uncovered field plot. At 72 days, colony counts of the inoculant were low in surface soil (uncovered plot) and earthworm guts (ley plot), whereas soil above the plow pan (uncovered plot), and the rhizosphere and worm burrows present until 1.2 m depth (ley plot) were survival hot spots (10⁵–10⁶ CFU g^?1 soil). Interestingly, strain CHA0 was also detected in the subsoil of both plots, at 10²–10⁵ CFU g^?1 soil between 1.8 and 2 m depth. However, non-cultured CHA0 cells were also evidenced based on immunofluorescence microscopy. Kogure's direct viable counts of nutrient-responsive cells showed that many more CHA0 cells were in a viable but non-culturable (VBNC) or a non-responsive (dormant) state than in a culturable state, and the proportion of cells in those non-cultured states depended on soil microbial habitat. At the most, cells in a VBNC state amounted to 34% (above the plow pan) and those in a dormant state to 89% (in bulk soil between 0.6 and 2 m) of all CHA0 cells. The results indicate that field-released Pseudomonas inoculants may persist at high cell numbers, even in deeper soil layers, and display a combination of different physiological states whose prevalence fluctuates according to soil microbial habitats.     

Effects of a Simulated Agricultural Runoff Event on Sediment Toxicity in a Managed Backwater Wetland

We examined the effects of an amended mixture of three pesticides, atrazine (72.7?g), S-metolachlor (54.5?g), and permethrin (both cis and trans isomers; 11.4?g), on 10-day sediment toxicity to Hyalella azteca in a managed natural backwater wetland after a simulated agricultural runoff event. Sediment samples were collected at 10, 40, 100, 300, and 500?m from inflow 13?days prior to amendment and 1, 5, 12, 22, and 36?days post-amendment. Background pesticide concentrations ranged from <1 to 977, <1 to 119, and <1 to 2???g?kg^?1, for atrazine, S-metolachlor, and permethrin, respectively. Average post-amendment atrazine and S-metolachlor were 2,915?C3,927 and 3?C20???g?kg^?1, respectively at 10?C40?m and 538?C872 and <1???g?kg^?1, respectively at 300?C500?m. Average post-amendment permethrin was 65?C200???g?kg^?1 at 10?C40?m and 1?C10???g?kg^?1 at 300?C500?m. H. azteca 10-day survival varied spatially and temporally up to 100?m from inflow. Animal growth, independent of survival, was reduced 40 and 100?m from inflow on day?36, showing continued sediment toxicity of up to 100?m from inflow more than 1?month after amendment. Animal survival and growth were unaffected at 300 and 500?m from inflow throughout the study period. Correlations of pesticide concentrations and H. azteca responses indicated that observed sediment toxicity was primarily from permethrin with potential additional synergistic toxicity from atrazine and methyl parathion. Study results indicate that natural backwater wetlands can be managed to ameliorate pesticide mixture 10-day sediment toxicity to H. azteca within 300?m of inflow and smaller wetlands (??100?m) may require several months of effluent retention to mitigate effects.     

Critical Loads of Acidity to Protect and Restore Acid-Sensitive Streams in Virginia and West Virginia

The purpose of the research described here is to apply a new approach for generating aquatic critical load (CL) and exceedance calculations for an important acid-sensitive region of the eastern USA. A widespread problem in regional aquatic acidification CL modeling for US ecosystems has been the lack of site-specific weathering data needed to derive accurate model CL estimates. A modified version of the steady-state water chemistry CL model was applied here to estimate CL and exceedances for streams throughout acid-sensitive portions of Virginia and West Virginia. A novel approach for estimating weathering across the regional landscape was applied, based on weathering estimates extracted from a well-tested, process-based watershed model of drainage water acid?Cbase chemistry and features of the landscape that are available as regional spatial data coverages. This process allowed extrapolation of site-specific weathering data from 92 stream watersheds to the regional context in three ecoregions for supporting CL calculations. Calculated CL values were frequently low, especially in the Blue Ridge ecoregion where one-third of the stream length had CL?<?50?meq/m²/year to maintain stream ANC at 50???eq/L under steady-state conditions. About half or more of the stream length in the study region was in exceedance of the CL for long-term aquatic resource protection under assumed nitrogen saturation at steady state. Land managers and air quality policy makers will need this information to better understand responses to air pollution emissions reductions and to develop ecoregion-specific air pollution targets.