Diversity of bacterial pathogens and their antimicrobial resistance profile among commensal rodents in Qatar

Rodents are sources of many zoonotic pathogens that are of public health concern. This study investigated bacterial pathogens and assessed their antimicrobial resistance (AMR) patterns in commensal rodents in Qatar. A total of 148 rodents were captured between August 2019 and February 2020, and blood, ectoparasites, and visceral samples were collected. Gram-negative bacteria were isolated from the intestines, and blood plasma samples were used to detect antibodies against Brucella spp., Chlamydophila abortus, and Coxiella burnetii. PCR assays were performed to detect C. burnetii, Leptospira spp., Rickettsia spp., and Yersinia pestis in rodent tissues and ectoparasite samples. Antimicrobial resistance by the isolated intestinal bacteria was performed using an automated VITEK analyzer. A total of 13 bacterial species were isolated from the intestine samples, namely Acinetobacter baumannii, Aeromonas salmonicida, Citrobacter freundii, Citrobacter koseri, Enterobacter aerogenes, Enterobacter cloacae, Escherichia coli, Hafnia alvei, Klebsiella pneumoniae, Providencia stuartii, Proteus mirabilis, Pseudomonas aeruginosa, and Salmonella enterica. The majority of them were E. coli (54.63%), followed by P. mirabilis (17.59%) and K. pneumoniae (8.33%). Most of the pathogens were isolated from rodents obtained from livestock farms (50.46%), followed by agricultural farms (26.61%) and other sources (22.94%). No antibodies (0/148) were detected against Brucella spp., C. abortus, or C. burnetii. In addition, 31.58% (6/19) of the flea pools and one (1/1) mite pool was positive for Rickettsia spp., and no sample was positive for C. burnetii, Leptospira spp., and Y. pestis by PCR. A total of 43 (38%) bacterial isolates were identified as multidrug resistant (MDR), whereas A. salmonicida (n?=?1) did not show resistance to any tested antimicrobials. Over 50% of bacterial MDR isolates were resistant to ampicillin, cefalotin, doxycycline, nitrofurantoin, and tetracycline. The presence of MDR pathogens was not correlated with rodent species or the location of rodent trapping. Seven (11.86%) E. coli and 2 (22.2%) K. pneumoniae were extended-spectrum beta-lactamases (ESBL) producers. These findings suggest that rodents can be a source of opportunistic bacteria for human and animal transmission in Qatar. Further studies are needed for the molecular characterization of the identified bacteria in this study.

     

Effect of thiamethoxam on cockroach locomotor activity is associated with its metabolite clothianidin

BACKROUND: In the present study, the effect of thiamethoxam and clothianidin on the locomotor activity of American cockroach, Periplaneta americana (L.), was evaluated. Because it has been proposed that thiamethoxam is metabolised to clothianidin, high‐performance liquid chromatography coupled with mass spectrometry was used to evaluate the amount of clothianidin on thiamethoxam‐treated cockroaches. RESULTS: One hour after neonicotinoid treatment, the time spent in the open‐field‐like apparatus significantly increased, suggesting a decrease in locomotor activity. The percentage of cockroaches displaying locomotor activity was significantly reduced 1 h after haemolymph application of 1 nmol g^?1 neonicotinoid, while no significant effect was found after topical and oral administration. However, at 24 and 48 h, all neonicotinoids were able to reduce locomotor activity, depending on their concentrations and the way they were applied. Interestingly, it was found that thiamethoxam was converted to clothianidin 1 h after application, but the amount of clothianidin did not rise proportionately to thiamethoxam, especially after oral administration. CONCLUSION: The data suggest that the effect of thiamethoxam on cockroach locomotor activity is due in part to clothianidin action because (1) thiamethoxam levels remained persistent 48 h after application and (2) the amount of clothianidin in cockroach tissues was consistent with the toxicity of thiamethoxam. Copyright © 2010 Society of Chemical Industry     

Inoculation with Phosphate Solubilizing Mesorhizobium Strains Improves the Performance of Chickpea (Cicer aritenium L.) Under Phosphorus Deficiency

The use of phosphate-solubilising bacteria as inoculants increases plant phosphorus (P) uptake and thus crop yield. Strains from the genus Mesorhizobium are among the most powerful phosphate solubilizing microorganisms. In order to study efficiency in P uptake and N₂ fixation in chickpea (Cicer aritenium), forty-two rhizobia strains natively from Tunisian soils were studied in symbiosis with the chickpea variety “Béja1” which is frequently cultivated in Tunisia. Plants were inoculated separately with these strains under controlled conditions in perlite under two sources of P i.e. soluble (KH₂PO₄) and insoluble P (Ca₂HPO₄). At flowering stage, growth, nodulation, P uptake and N₂ fixation were assessed in all symbiotic combinations. The results showed that the S27 strain efficiently mobilized P into plants, observed as a significant increase of plant P content when insoluble P (Ca₂HPO₄) was supplied to the soil. This was associated with a significant increase in plant biomass, nodule number and N content under insoluble P conditions. Additionally, inoculation with the Mesorhizobium strain S27 significantly increased the root acid phosphatase activity under insoluble P. This study also shows significant correlations found between plant P content and acid phosphatase activity under low P conditions which may highlight the contribution of acid phosphatases in increasing P use efficiency. A field experiment also showed that most of the chickpea analyzed parameters were improved when plants inoculated with two selected rhizobia strains (S26 and S27) and supplied with P2O5. Overall, these findings postulate that rhizobial inoculation should not only be based on the effectiveness of strains regarding N fixation, but also to other traits such as P solubilisation potential.     

Monitoring of South Sinai coral reefs: influence of natural and anthropogenic factors

• 1. To monitor any impacts to coral reefs related to the exponential growth of tourism in the South Sinai region of the Egyptian Red Sea, nine stations were established at key reef sites over 2002–2003. At each station coral cover was determined using a video survey method at depths of 3, 7 and 16 m, and fish abundance by underwater visual census at depths of 3 and 10 m.
• 2. Mean total coral cover (hard plus soft) ranged from 58% to 23% at 3 m, 50% to 14% at 7 m, and 52% to 13% at 16 m, and hard coral cover from 37.5% to 15.7% at 3 m, 32.8% to 7.0% at 7 m, and 17.8% to 2.2% at 16 m. Analyses confirmed differences in coral assemblage related to depth and wave exposure.
• 3. Fish abundances and assemblages also varied with depth and proximity of deep water. Also the one site subject to fishing had lower abundances of some commercial fish families and greater abundances of some herbivores.
• 4. Transects subject to greater tourist use did not segregate from those subject to less tourist use, despite evidence from other work of an effect from visitor damage to corals at some sites. This may be because visitors were more attracted to sites that had higher coral cover.
• 5. Comparison of the present data with that from past studies is difficult because of the differences in sites and method employed, but several observations suggest a moderate decline in coral cover during recent decades. Such a decline would be compatible with the recorded impact of an outbreak of crown‐of‐thorns starfish, Acanthaster planci, as well as with other evidence of accumulating damage by visitors.
• 6. Further monitoring using the same stations and consistent protocols is urgently required.

Copyright © 2008 John Wiley & Sons, Ltd.     

Potential role of viral surface glycoproteins in the replication of H3N2 triple reassortant influenza A viruses in swine and turkeys

The H3N2 triple reassortant (TR) influenza viruses emerged in swine in 1998 and then in turkeys in 2003. It was then hypothesized that these viruses crossed the species barrier and transmitted from pigs to turkeys. In previous work we identified viruses with different transmission behavior between the two species, of which A/turkey/Ohio/313053/04 (TK04) transmitted both ways between swine and turkeys, and A/swine/North Carolina/03 (SW03) did not transmit either way between the two species. Utilizing the 12-plasmid reverse genetics (RG) system, we rescued two viruses (TK04 and SW03) with potentially different transmission behavior between pigs and turkeys. Single gene reassortants (SGR) were generated by switching the hemagglutinin (HA) or the neuraminidase (NA) genes between both viruses, and were evaluated for replication in vitro (pig and turkey tracheal/bronchial epithelial cells) and in vivo (pigs and turkeys). RG-created TK04 replicated more efficiently than SW03 in vitro and in vivo. Additionally, TK04 exhibited better binding affinity to plasma membrane preparations (PMP) from pig and turkey tracheal/bronchial epithelial cells compared to SW03. In study with SGR viruses, the HA protein was found to be essential for TK04 virus transmission amongst turkeys, but not sole factor contributing to the efficient replication of virus in turkeys and pigs. Such findings further highlight the polygenic nature of influenza virus pathogenesis.     

Studies on the composition of sunflower seed heads

The composition of sunflower (Helianthus annuus) seed heads was investigated. High amounts of lignin (12%) were found while glycosides comprised a minor component of the plant material. Lipids were isolated and a total sterol content of 1.05% was found. A protein content of 12.5% was also found. Acid hydrolysis of the plant material showed the presence of combined galacturonic acid (8%), galactose (3.4%), glucose (1.7%), arabinose (0.63%), xylose (0.7%) and rhamnose (21%). The factors influencing the extraction of pectin (11.85%) were studied.     

<Emphasis Type="Italic">Alternaria</Emphasis> species associated with early blight epidemics on tomato and other <Emphasis Type="Italic">Solanaceae</Emphasis> crops in northwestern Algeria

Clubroot, caused by the protozoan parasite Plasmodiophora brassicae Woronin, is one of the most damaging diseases of Brassica napus worldwide. Resistant plant material is valuable for cultivation in all areas of high incidence of the disease and intensive growth of oilseed rape. We have evaluated clubroot resistance, plant morphology and seed quality in 15 lines of an F₄ generation and selected six lines of F₅ generation of interspecific hybrids obtained from a cross between a male sterile line of B. napus ‘MS8’, selected from resynthesized oilseed rape (B. rapa ssp. chinensis × B. oleracea var. gemmifera) and an ecotype of B. rapa ssp. pekinensis. Clubroot resistance was evaluated using a bioassay with P₁-P₅ pathotypes of P. brassicae (according to the classification of Somé et al. 1996). The resistance to the pathotype P₁ was successfully fixed in the F₅ generation, and improved in some lines in respect to the pathotypes P₂-P₄. The resistance to P₁ and the other tested pathotypes was not linked. Characterization of plant material included recent techniques of FISH and BAC-FISH with a special focus on the analysis of ribosomal DNA (rDNA) of selected individuals. Two hybrid lines combined high levels of resistance with appropriate plant morphology, good seed quality traits and a stable chromosome number and arrangement. Recent techniques of ‘chromosome painting’ provided good insight into chromosome organization in the hybrids obtained, and offered opportunities of further improvement of the breeding process.